Guide to the Human Genome
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Name: RHOXF2B Sequence: fasta or formatted (288aa) NCBI GI: 153791494
Description:

Rhox homeobox family, member 2B

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         23           2
 C cysteine            1.0          3           1
 D aspartate           4.5         13           2
 E glutamate          10.4         30           4
 F phenylalanine       5.2         15           1
 G glycine             9.0         26           3
 H histidine           1.7          5           1
 I isoleucine          1.7          5           1
 K lysine              2.8          8           1
 L leucine             8.3         24           2
 M methionine          4.5         13           1
 N asparagine          3.1          9           1
 P proline            10.8         31           3
 Q glutamine           6.9         20           2
 R arginine            4.5         13           3
 S serine              6.6         19           3
 T threonine           3.1          9           1
 V valine              5.2         15           1
 W tryptophan          1.4          4           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rhox homeobox family, member 2B 
RHOXF2                0.988   Rhox homeobox family, member 2 
ESX1                  0.158   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
RHOXF1                0.098   Rhox homeobox family, member 1 
PRRX1                 0.095   paired mesoderm homeobox 1 isoform pmx-1a 
PRRX1                 0.095   paired mesoderm homeobox 1 isoform pmx-1b 
PRRX2                 0.093   paired related homeobox 2 
PAX6                  0.088   paired box gene 6 isoform a 
PAX6                  0.088   paired box gene 6 isoform b 
PAX6                  0.088   paired box gene 6 isoform a 
SHOX2                 0.081   short stature homeobox 2 isoform a 
RAX2                  0.081   retina and anterior neural fold homeobox 2 
PITX1                 0.079   paired-like homeodomain transcription factor 1 [Hom...
RAX                   0.079   retina and anterior neural fold homeobox 
OTP                   0.079   PREDICTED: orthopedia homeobox 
ARX                   0.079   aristaless related homeobox 
PHOX2A                0.079   paired-like homeobox 2a 
OTP                   0.079   orthopedia homeobox 
LOC100291814          0.077   PREDICTED: similar to Rhox homeobox family, member ...
ALX4                  0.077   aristaless-like homeobox 4 
ALX1                  0.074   cartilage paired-class homeoprotein 1 
PROP1                 0.074   PROP paired-like homeobox 1 
PITX3                 0.074   paired-like homeodomain 3 
PITX2                 0.074   paired-like homeodomain transcription factor 2 isofo...
PAX7                  0.074   paired box 7 isoform 1 
PAX7                  0.074   paired box 7 isoform 2 
PAX7                  0.074   paired box 7 isoform 3 
PITX2                 0.070   paired-like homeodomain transcription factor 2 isofo...
VAX2                  0.070   ventral anterior homeobox 2 
GSC2                  0.070   goosecoid homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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