ALX1 5698

Name: ALX1	Sequence: fasta or formatted (326aa)		NCBI GI: 154813201
Description: cartilage paired-class homeoprotein 1		Referenced in: Bone and Related Tissues Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 21 2 C cysteine 1.8 6 1 D aspartate 4.0 13 1 E glutamate 7.1 23 2 F phenylalanine 4.6 15 2 G glycine 5.2 17 2 H histidine 3.7 12 2 I isoleucine 1.8 6 1 K lysine 5.8 19 2 L leucine 7.4 24 2 M methionine 3.1 10 1 N asparagine 5.2 17 2 P proline 4.9 16 2 Q glutamine 4.9 16 2 R arginine 6.7 22 2 S serine 11.0 36 3 T threonine 6.7 22 2 V valine 5.2 17 2 W tryptophan 1.2 4 1 Y tyrosine 3.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cartilage paired-class homeoprotein 1 ALX4 0.322 aristaless-like homeobox 4 ALX3 0.278 aristaless-like homeobox 3 ARX 0.171 aristaless related homeobox PITX2 0.148 paired-like homeodomain transcription factor 2 isofo... PITX2 0.146 paired-like homeodomain transcription factor 2 isofo... PITX2 0.146 paired-like homeodomain transcription factor 2 isofo... VSX2 0.131 visual system homeobox 2 VSX1 0.128 visual system homeobox 1 isoform a PITX3 0.123 paired-like homeodomain 3 PITX1 0.123 paired-like homeodomain transcription factor 1 [Hom... PAX7 0.123 paired box 7 isoform 1 PAX7 0.123 paired box 7 isoform 3 OTP 0.123 PREDICTED: orthopedia homeobox OTP 0.123 orthopedia homeobox PAX7 0.121 paired box 7 isoform 2 PHOX2B 0.120 paired-like homeobox 2b PHOX2A 0.120 paired-like homeobox 2a PAX3 0.117 paired box 3 isoform PAX3i PAX3 0.117 paired box 3 isoform PAX3g PAX3 0.117 paired box 3 isoform PAX3h PAX3 0.117 paired box 3 isoform PAX3e PAX3 0.117 paired box 3 isoform PAX3d PAX3 0.117 paired box 3 isoform PAX3 UNCX 0.117 UNC homeobox DRGX 0.117 dorsal root ganglia homeobox RAX 0.115 retina and anterior neural fold homeobox ISX 0.112 intestine-specific homeobox PRRX1 0.110 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.110 paired mesoderm homeobox 1 isoform pmx-1b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.