OTP 3729

Name: OTP	Sequence: fasta or formatted (325aa)		NCBI GI: 14149760
Description: orthopedia homeobox		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt mRNA [325aa] PREDICTED: orthopedia homeobox
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 40 8 C cysteine 1.2 4 1 D aspartate 4.3 14 1 E glutamate 3.1 10 2 F phenylalanine 2.8 9 1 G glycine 9.5 31 2 H histidine 2.5 8 1 I isoleucine 1.2 4 1 K lysine 4.0 13 2 L leucine 10.2 33 2 M methionine 2.8 9 1 N asparagine 3.1 10 1 P proline 9.8 32 3 Q glutamine 6.5 21 3 R arginine 5.8 19 2 S serine 10.2 33 2 T threonine 4.9 16 2 V valine 4.0 13 1 W tryptophan 1.2 4 1 Y tyrosine 0.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 orthopedia homeobox OTP 1.000 PREDICTED: orthopedia homeobox ARX 0.155 aristaless related homeobox PHOX2A 0.150 paired-like homeobox 2a RAX 0.134 retina and anterior neural fold homeobox ALX1 0.125 cartilage paired-class homeoprotein 1 ALX4 0.123 aristaless-like homeobox 4 VSX1 0.123 visual system homeobox 1 isoform a PHOX2B 0.122 paired-like homeobox 2b SHOX2 0.122 short stature homeobox 2 isoform a PITX1 0.120 paired-like homeodomain transcription factor 1 [Hom... OTX1 0.120 orthodenticle homeobox 1 PRRX2 0.117 paired related homeobox 2 UNCX 0.117 UNC homeobox PAX7 0.117 paired box 7 isoform 1 PAX7 0.117 paired box 7 isoform 2 PAX7 0.117 paired box 7 isoform 3 ESX1 0.117 extraembryonic, spermatogenesis, homeobox 1-like [Ho... DRGX 0.115 dorsal root ganglia homeobox RAX2 0.114 retina and anterior neural fold homeobox 2 PAX6 0.112 paired box gene 6 isoform a PAX6 0.112 paired box gene 6 isoform b PAX6 0.112 paired box gene 6 isoform a ALX3 0.111 aristaless-like homeobox 3 PAX3 0.109 paired box 3 isoform PAX3i PAX3 0.109 paired box 3 isoform PAX3g PAX3 0.109 paired box 3 isoform PAX3h PAX3 0.109 paired box 3 isoform PAX3e PAX3 0.109 paired box 3 isoform PAX3d PAX3 0.109 paired box 3 isoform PAX3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.