PAX6 29096

Name: PAX6	Sequence: fasta or formatted (422aa)		NCBI GI: 4505615
Description: paired box gene 6 isoform a		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt mRNA [422aa] paired box gene 6 isoform a alt prot [436aa] paired box gene 6 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 19 2 C cysteine 1.4 6 1 D aspartate 3.3 14 1 E glutamate 5.0 21 2 F phenylalanine 2.1 9 1 G glycine 7.6 32 3 H histidine 1.4 6 1 I isoleucine 4.5 19 1 K lysine 3.1 13 1 L leucine 5.9 25 2 M methionine 3.3 14 1 N asparagine 5.0 21 2 P proline 8.8 37 2 Q glutamine 7.1 30 3 R arginine 7.8 33 2 S serine 12.1 51 3 T threonine 7.3 31 2 V valine 5.5 23 2 W tryptophan 1.4 6 1 Y tyrosine 2.8 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired box gene 6 isoform a PAX6 1.000 paired box gene 6 isoform a PAX6 0.989 paired box gene 6 isoform b PAX7 0.283 paired box 7 isoform 2 PAX3 0.280 paired box 3 isoform PAX3i PAX7 0.278 paired box 7 isoform 1 PAX7 0.278 paired box 7 isoform 3 PAX3 0.275 paired box 3 isoform PAX3e PAX3 0.275 paired box 3 isoform PAX3d PAX3 0.275 paired box 3 isoform PAX3 PAX3 0.274 paired box 3 isoform PAX3g PAX3 0.274 paired box 3 isoform PAX3h PAX4 0.262 paired box 4 PAX2 0.256 paired box protein 2 isoform c PAX2 0.251 paired box protein 2 isoform d PAX2 0.251 paired box protein 2 isoform b PAX2 0.244 paired box protein 2 isoform a PAX2 0.244 paired box protein 2 isoform e PAX8 0.242 paired box 8 isoform PAX8A PAX5 0.239 paired box 5 PAX8 0.236 paired box 8 isoform PAX8D PAX8 0.236 paired box 8 isoform PAX8E PAX8 0.236 paired box 8 isoform PAX8C PAX8 0.236 paired box 8 isoform PAX8B PAX1 0.188 paired box 1 PAX9 0.187 paired box 9 PAX3 0.177 paired box 3 isoform PAX3b PAX3 0.177 paired box 3 isoform PAX3a RAX 0.100 retina and anterior neural fold homeobox PRRX1 0.099 paired mesoderm homeobox 1 isoform pmx-1b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.