Search of human proteins with 153251771

Search of human proteins with 153251771

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153251771 hypothetical protein LOC56181 isoform b [Homo
sapiens]
         (205 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153251771 hypothetical protein LOC56181 isoform b [Homo sapiens]   410   e-115
gi|153251766 hypothetical protein LOC56181 isoform a [Homo sapiens]   302   1e-82
gi|153251748 hypothetical protein LOC56181 isoform a [Homo sapiens]   302   1e-82
gi|153251745 hypothetical protein LOC56181 isoform a [Homo sapiens]   302   1e-82
gi|224994164 mitochondrial fission regulator 1 isoform 3 [Homo s...    78   5e-15
gi|224994160 mitochondrial fission regulator 1 isoform 1 [Homo s...    78   5e-15
gi|149999350 DUF729 domain containing 1 [Homo sapiens]                 77   8e-15
gi|39653315 DUF729 domain containing 1 [Homo sapiens]                  77   8e-15
gi|224994162 mitochondrial fission regulator 1 isoform 2 [Homo s...    49   3e-06
gi|27436948 lamin A/C isoform 3 [Homo sapiens]                         33   0.22 
gi|5031875 lamin A/C isoform 2 [Homo sapiens]                          33   0.22 
gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens]               33   0.22 
gi|19924175 axonal transport of synaptic vesicles [Homo sapiens]       33   0.22 
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom...    33   0.22 
gi|102469037 jun D proto-oncogene [Homo sapiens]                       32   0.38 
gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens]    31   0.84 
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        31   0.84 
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]        30   1.1  
gi|124517695 ankyrin repeat domain 36B [Homo sapiens]                  29   3.2  
gi|226495417 coiled-coil domain containing 102A [Homo sapiens]         28   4.2  
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po...    28   4.2  
gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]            28   4.2  
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub...    28   4.2  
gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo sap...    28   4.2  
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap...    28   4.2  
gi|55770834 centromere protein F [Homo sapiens]                        28   4.2  
gi|154937324 hypothetical protein LOC440295 [Homo sapiens]             28   4.2  
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po...    28   5.5  
gi|148806872 lupus brain antigen 1 [Homo sapiens]                      28   5.5  
gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens]    28   7.1  

>gi|153251771 hypothetical protein LOC56181 isoform b [Homo sapiens]
          Length = 205

 Score =  410 bits (1055), Expect = e-115
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
           MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60

Query: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
           TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLSFHQSPCFVLPALNVANQ 180
           ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLSFHQSPCFVLPALNVANQ
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLSFHQSPCFVLPALNVANQ 180

Query: 181 NTKLPAVRLKRMTASLCPRPAALQT 205
           NTKLPAVRLKRMTASLCPRPAALQT
Sbjct: 181 NTKLPAVRLKRMTASLCPRPAALQT 205


>gi|153251766 hypothetical protein LOC56181 isoform a [Homo sapiens]
          Length = 292

 Score =  302 bits (774), Expect = 1e-82
 Identities = 162/216 (75%), Positives = 173/216 (80%), Gaps = 16/216 (7%)

Query: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
           MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60

Query: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
           TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRS--------------LSFHQ 166
           ALPALSRTTELQDELSHLRSQIAKIVAADA ++     + S               SFH 
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180

Query: 167 SPCFVLPALNVAN--QNTKLPAVRLKRMTASLCPRP 200
           +  FV+  +      +  +LP+V L    +  C +P
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKP 216


>gi|153251748 hypothetical protein LOC56181 isoform a [Homo sapiens]
          Length = 292

 Score =  302 bits (774), Expect = 1e-82
 Identities = 162/216 (75%), Positives = 173/216 (80%), Gaps = 16/216 (7%)

Query: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
           MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60

Query: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
           TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRS--------------LSFHQ 166
           ALPALSRTTELQDELSHLRSQIAKIVAADA ++     + S               SFH 
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180

Query: 167 SPCFVLPALNVAN--QNTKLPAVRLKRMTASLCPRP 200
           +  FV+  +      +  +LP+V L    +  C +P
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKP 216


>gi|153251745 hypothetical protein LOC56181 isoform a [Homo sapiens]
          Length = 292

 Score =  302 bits (774), Expect = 1e-82
 Identities = 162/216 (75%), Positives = 173/216 (80%), Gaps = 16/216 (7%)

Query: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60
           MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP
Sbjct: 1   MSGMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVP 60

Query: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120
           TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP
Sbjct: 61  TLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKP 120

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRS--------------LSFHQ 166
           ALPALSRTTELQDELSHLRSQIAKIVAADA ++     + S               SFH 
Sbjct: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAASASLTPDFLSPGSSNVSSPLPCFGSSFHS 180

Query: 167 SPCFVLPALNVAN--QNTKLPAVRLKRMTASLCPRP 200
           +  FV+  +      +  +LP+V L    +  C +P
Sbjct: 181 TTSFVISDITEETEVEVPELPSVPLLCSASPECCKP 216


>gi|224994164 mitochondrial fission regulator 1 isoform 3 [Homo
           sapiens]
          Length = 348

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 18/146 (12%)

Query: 12  IWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLR--DVPPVPTLADIAWIA 69
           +W  KP+G++RS+VR+IGTNL L  C R  F+   + ++          V + AD+ W+A
Sbjct: 24  LWSRKPYGSSRSIVRKIGTNLSLIQCPRVQFQINSHATEWSPSHPGEDAVASFADVGWVA 83

Query: 70  ADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEERLLALKKPAL- 122
            +E E  AR+R++ R   PL+     ++ +P     R  S+P+L   E +   LK PAL 
Sbjct: 84  KEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEPQ---LKTPALA 136

Query: 123 --PALSRTTELQDELSHLRSQIAKIV 146
              AL +   L++EL+ LR+QIAKIV
Sbjct: 137 NEEALQKICALENELAALRAQIAKIV 162


>gi|224994160 mitochondrial fission regulator 1 isoform 1 [Homo
           sapiens]
          Length = 333

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 18/146 (12%)

Query: 12  IWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNISDLCLR--DVPPVPTLADIAWIA 69
           +W  KP+G++RS+VR+IGTNL L  C R  F+   + ++          V + AD+ W+A
Sbjct: 24  LWSRKPYGSSRSIVRKIGTNLSLIQCPRVQFQINSHATEWSPSHPGEDAVASFADVGWVA 83

Query: 70  ADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEERLLALKKPAL- 122
            +E E  AR+R++ R   PL+     ++ +P     R  S+P+L   E +   LK PAL 
Sbjct: 84  KEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEPQ---LKTPALA 136

Query: 123 --PALSRTTELQDELSHLRSQIAKIV 146
              AL +   L++EL+ LR+QIAKIV
Sbjct: 137 NEEALQKICALENELAALRAQIAKIV 162


>gi|149999350 DUF729 domain containing 1 [Homo sapiens]
          Length = 385

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 29/159 (18%)

Query: 3   GMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNI----SDLCLRDVPP 58
           G+     + IW+NK +G+ RS+VR IG  LPL+PC R +FE +P +    SD C      
Sbjct: 16  GVPVEQVLLIWENKDYGSTRSIVRIIGKMLPLEPCRRPNFELIPLLNSVDSDNC---GSM 72

Query: 59  VPTLADIAWIAADEEETYARVRSDT-----------RPLRHTWKPSPLIVMQRNASVPNL 107
           VP+ ADI ++A DEE +Y R R+              PLR    P    V Q+     +L
Sbjct: 73  VPSFADILYVANDEEASYLRFRNSIWKNEEEKVEIFHPLRLVRDPLSPAVRQKETVKNDL 132

Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIV 146
             +E            A+ +   L++EL+ LRSQIA IV
Sbjct: 133 PVNE-----------AAIRKIAALENELTFLRSQIAAIV 160


>gi|39653315 DUF729 domain containing 1 [Homo sapiens]
          Length = 385

 Score = 77.4 bits (189), Expect = 8e-15
 Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 29/159 (18%)

Query: 3   GMEATVTIPIWQNKPHGAARSVVRRIGTNLPLKPCARASFETLPNI----SDLCLRDVPP 58
           G+     + IW+NK +G+ RS+VR IG  LPL+PC R +FE +P +    SD C      
Sbjct: 16  GVPVEQVLLIWENKDYGSTRSIVRIIGKMLPLEPCRRPNFELIPLLNSVDSDNC---GSM 72

Query: 59  VPTLADIAWIAADEEETYARVRSDT-----------RPLRHTWKPSPLIVMQRNASVPNL 107
           VP+ ADI ++A DEE +Y R R+              PLR    P    V Q+     +L
Sbjct: 73  VPSFADILYVANDEEASYLRFRNSIWKNEEEKVEIFHPLRLVRDPLSPAVRQKETVKNDL 132

Query: 108 RGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIV 146
             +E            A+ +   L++EL+ LRSQIA IV
Sbjct: 133 PVNE-----------AAIRKIAALENELTFLRSQIAAIV 160


>gi|224994162 mitochondrial fission regulator 1 isoform 2 [Homo
           sapiens]
          Length = 300

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 16/97 (16%)

Query: 59  VPTLADIAWIAADEEETYARVRSDTR---PLRHT---WKPSPLIVMQRNASVPNLRGSEE 112
           V + AD+ W+A +E E  AR+R++ R   PL+     ++ +P     R  S+P+L   E 
Sbjct: 40  VASFADVGWVAKEEGECSARLRTEVRSRPPLQDDLLFFEKAP----SRQISLPDLSQEEP 95

Query: 113 RLLALKKPALP---ALSRTTELQDELSHLRSQIAKIV 146
           +L   K PAL    AL +   L++EL+ LR+QIAKIV
Sbjct: 96  QL---KTPALANEEALQKICALENELAALRAQIAKIV 129


>gi|27436948 lamin A/C isoform 3 [Homo sapiens]
          Length = 634

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 61  TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
           TL  +A   A  +   ++VR + + L  R+T K   LI  Q  A + +L    E LL  K
Sbjct: 91  TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144

Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
           + AL  ALS    L+ EL  LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175


>gi|5031875 lamin A/C isoform 2 [Homo sapiens]
          Length = 572

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 61  TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
           TL  +A   A  +   ++VR + + L  R+T K   LI  Q  A + +L    E LL  K
Sbjct: 91  TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144

Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
           + AL  ALS    L+ EL  LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175


>gi|27436946 lamin A/C isoform 1 precursor [Homo sapiens]
          Length = 664

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)

Query: 61  TLADIAWIAADEEETYARVRSDTRPL--RHTWKPSPLIVMQRNASVPNLRGSEERLLALK 118
           TL  +A   A  +   ++VR + + L  R+T K   LI  Q  A + +L    E LL  K
Sbjct: 91  TLDSVAKERARLQLELSKVREEFKELKARNTKKEGDLIAAQ--ARLKDL----EALLNSK 144

Query: 119 KPALP-ALSRTTELQDELSHLRSQIAKIVAA 148
           + AL  ALS    L+ EL  LR Q+AK+ AA
Sbjct: 145 EAALSTALSEKRTLEGELHDLRGQVAKLEAA 175


>gi|19924175 axonal transport of synaptic vesicles [Homo sapiens]
          Length = 1690

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 65   IAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKPALPA 124
            +A++  +E     R RSD+  L H W+   L ++Q      +     E+L   ++P   A
Sbjct: 1352 VAYVRGEENLAGWRPRSDSLILDHQWELEKLSLLQEVEKTRHYLLLREKLETAQRPVPEA 1411

Query: 125  LSRTTELQDELSHLRSQIAKIVAADAVTSP 154
            LS     +D  SH  S  +  ++A+   SP
Sbjct: 1412 LSPAFS-EDSESHGSSSASSPLSAEGRPSP 1440


>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
           sapiens]
          Length = 1551

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 62  LADIAWIAADEEETYARVRSDT---RPLRHTWKPSPLIVMQRN----------ASVPNLR 108
           L  +A   A+E E+   V + T   RPL H WK   L  M+ +          A +   +
Sbjct: 698 LQALATKMAEELESLRNVGTQTLPARPLDHQWKARRLQKMEASARLELQSALEAEIRAKQ 757

Query: 109 GSEERLLALKKPALPALSRTTE-------LQDELSHLRSQIAKIVAADAVTSPRRQRWRS 161
           G +ERL  +++  L A  R  E       LQ EL+ LR ++      D  T P       
Sbjct: 758 GLQERLTQVQEAQLQAERRLQEAEKQSQALQQELAMLREELRARGPVD--TKPSNSLIPF 815

Query: 162 LSFHQS 167
           LSF  S
Sbjct: 816 LSFRSS 821


>gi|102469037 jun D proto-oncogene [Homo sapiens]
          Length = 347

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 13/115 (11%)

Query: 56  VPPVPTLADIAWIAADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLL 115
           VP VP+  +   ++  + +T  R++++ + LR+    S      R   +  +   EE++ 
Sbjct: 246 VPDVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAASKC----RKRKLERISRLEEKVK 301

Query: 116 ALKKPALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLSFHQSPCF 170
            LK       S+ TEL    S LR Q+A++     V S      + L  HQ P +
Sbjct: 302 TLK-------SQNTELASTASLLREQVAQL--KQKVLSHVNSGCQLLPQHQVPAY 347


>gi|239753245 PREDICTED: similar to UPF0634 protein C [Homo sapiens]
          Length = 710

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 9/103 (8%)

Query: 70  ADEEETY---ARVRSD---TRPLRHTWKPSPLIVMQRNASVPNL---RGSEERLLALKKP 120
           +DE+++    AR + D   +R +    +P+   +  +  SVPN+   +  E+    +   
Sbjct: 546 SDEKDSVLYIAREKKDGEKSRTVSSQKQPALKAICDKEDSVPNMATEKKDEQISGTVSSQ 605

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLS 163
             PAL  T++ +D +S++ ++I     +  V+S ++  W++ S
Sbjct: 606 KQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQKQPAWKATS 648


>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 1524

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 9/103 (8%)

Query: 70  ADEEETY---ARVRSD---TRPLRHTWKPSPLIVMQRNASVPNL---RGSEERLLALKKP 120
           +DE+++    AR + D   TR +    +P+   +  +  SVPN+   +  E+    +   
Sbjct: 684 SDEKDSVLNIARGKKDGEKTRTVSSPKQPALKAICDKEDSVPNMATEKKDEQISGTVSCQ 743

Query: 121 ALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLS 163
             PAL  T++ +D +S++ ++I     +  V+S ++  W++ S
Sbjct: 744 KQPALKATSDKKDSVSNIPTEIKDGQQSGTVSSQKQPAWKATS 786


>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
          Length = 380

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 69  AADEEETYARVRSDTRPLRHTWKPSPLIVMQRNASVPNLRGSEERLLALKKPALPALSRT 128
           +A++EE  ARV + +  +R  W+       + + ++P ++ S     +  +P  P+ S  
Sbjct: 289 SANQEEPEARVPAQSESVRRPWE-------KNSTTLPRMKSSSSVTTSETQPCTPSSSDY 341

Query: 129 TELQDELSHLRSQIAK 144
           ++LQ     L  ++ K
Sbjct: 342 SDLQRVKQELLEEVKK 357


>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
          Length = 1121

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 83  TRPLRHTWKPSPLIVMQRNASVPNLRGS---EERLLALKKPALPALSRTTELQDELSHLR 139
           TR +    +PS      +  SVPN+      E+    +     PAL  T++ +D +S++ 
Sbjct: 292 TRRVSSHKQPSLKATSDKEDSVPNMATETKDEQISGTVSCQKQPALKATSDKKDSVSNIP 351

Query: 140 SQIAKIVAADAVTSPRRQRWRSLSFHQSPCFVLPALNVANQNTKLPAVRLKRMTASLCPR 199
           ++I     +  V+S ++  W++ S  +         +V+N  T++   ++ R T S   R
Sbjct: 352 TEIKDGQQSGTVSSQKQPAWKATSVKKD--------SVSNIATEIKDGQI-RGTVSSQRR 402

Query: 200 PAALQT 205
           PA   T
Sbjct: 403 PALKTT 408


>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
          Length = 550

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 56  VPPVPTL-ADIAWIAADE------EETYARVRSDTRPLRH------TWKPS-PLIVMQRN 101
           +PP P L AD  W + +E      EE  AR     + +R        W+     +  +RN
Sbjct: 57  LPPAPALLADGDWESREELRLRELEEARARAAQMEKTMRRWSDCTANWREKWSKVRAERN 116

Query: 102 ASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRR 156
            +   +R   +RL AL K    A     E Q E      ++A++  A  V    R
Sbjct: 117 RAREEVRQLRQRLDALTKELAGARRERQEAQGECEARGRELARLRGARGVADQTR 171


>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
           polyclonal antibodies [Homo sapiens]
          Length = 868

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 83  TRPLRHTWKPSPLIVMQRNASVPNLRGS---EERLLALKKPALPALSRTTELQDELSHLR 139
           TR +    +P+      +  SVPN+      E+    +     PAL  T++ +D +S++ 
Sbjct: 39  TRRVSSHKQPALKATSDKENSVPNMATETKDEQISGTVSSQKQPALKATSDKKDSVSNIP 98

Query: 140 SQIAKIVAADAVTSPRRQRWRSLS 163
           ++I     +  V+S ++  W++ S
Sbjct: 99  TEIKDGQQSGTVSSQKQPAWKATS 122


>gi|239745299 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 523

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 96  IVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKI 145
           +V +   S+  L+      LA + PA P  S+  +LQDE +HLR ++  +
Sbjct: 129 LVQKLGRSLFKLKNQTAEPLAPEPPAGP--SKVEQLQDETNHLRKELESV 176


>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
           subfamily a-like [Homo sapiens]
          Length = 432

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 96  IVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKI 145
           +V +   S+  L+      LA + PA P  S+  +LQDE +HLR ++  +
Sbjct: 129 LVQKLGRSLFKLKNQTAEPLAPQPPAGP--SKVEQLQDETNHLRKELESV 176


>gi|239745259 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 432

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 96  IVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKI 145
           +V +   S+  L+      LA + PA P  S+  +LQDE +HLR ++  +
Sbjct: 129 LVQKLGRSLFKLKNQTAEPLAPEPPAGP--SKVEQLQDETNHLRKELESV 176


>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 479

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 96  IVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKI 145
           +V +   S+  L+      LA + PA P  S+  +LQDE +HLR ++  +
Sbjct: 129 LVQKLGRSLFKLKNQTAEPLAPEPPAGP--SKVEQLQDETNHLRKELESV 176


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 71   DEEETYARVRSDTRPLRHT--WKPSPLIVMQRNASV--PNLRGSEERLLALKKPALPALS 126
            D E   +R+RS+   + H   +  + L V+Q        +    ++ ++ L++      S
Sbjct: 1899 DVENELSRIRSEKASIEHEALYLEADLEVVQTEKLCLEKDNENKQKVIVCLEEELSVVTS 1958

Query: 127  RTTELQDELSHLRSQIAKIVAADAVTSPRRQRWRSLSFHQSPCFVLPALNVANQNTKLPA 186
               +L+ EL  +     K  A D ++   +++ + L  HQS C  L  + VA    K   
Sbjct: 1959 ERNQLRGELDTMSK---KTTALDQLSEKMKEKTQELESHQSEC--LHCIQVAEAEVKEKT 2013

Query: 187  VRLKRMTASL 196
              L+ +++ +
Sbjct: 2014 ELLQTLSSDV 2023


>gi|154937324 hypothetical protein LOC440295 [Homo sapiens]
          Length = 432

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 96  IVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKI 145
           +V +   S+  L+      LA + PA P  S+  +LQDE +HLR ++  +
Sbjct: 129 LVQKLGRSLFKLKNQTAEPLAPQPPAGP--SKVEQLQDETNHLRKELESV 176


>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
           polyclonal antibodies [Homo sapiens]
          Length = 1430

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 83  TRPLRHTWKPSPLIVMQRNASVPNLRGS---EERLLALKKPALPALSRTTELQDELSHLR 139
           TR +    +P+      +  SVPN+      E+    +     PAL  T++ +D +S++ 
Sbjct: 601 TRRVSSHKQPALKATSDKENSVPNMATETKDEQISGTVSSQKQPALKATSDKKDSVSNIP 660

Query: 140 SQIAKIVAADAVTSPRRQRWRSLS 163
           ++I     +  V+S ++  W++ S
Sbjct: 661 TEIKDGQQSGTVSSQKQLAWKATS 684


>gi|148806872 lupus brain antigen 1 [Homo sapiens]
          Length = 2375

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 22/91 (24%), Positives = 42/91 (46%)

Query: 91   KPSPLIVMQRNASVPNLRGSEERLLALKKPALPALSRTTELQDELSHLRSQIAKIVAADA 150
            K  P+  +  +AS   L  + + L A K   + A+    +++D+L  L+S+     AAD 
Sbjct: 1302 KTLPISKLSYSASQFYLEAAAKYLSANKMKEMMAVLSKLDIEDQLVFLKSRKRLAEAADL 1361

Query: 151  VTSPRRQRWRSLSFHQSPCFVLPALNVANQN 181
            +    R+   +L   Q  C +  A   A+++
Sbjct: 1362 LNREGRREEAALLMKQHGCLLEAARLTADKD 1392


>gi|163644267 neutrophil cytosolic factor 4 isoform 2 [Homo sapiens]
          Length = 348

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 120 PALPALSRTTELQDELSHLRSQIAKIVAADAVTSPRRQRW----RSLSFHQSPCFVLPAL 175
           P+L  L  T+     LSH ++     ++ +AVTS +R  W     S   H +P F  P  
Sbjct: 267 PSLRPLPLTSPSHGSLSHSKAPSGSQMSHNAVTSHQRPGWPGQPHSPFPHPTPHF-QPDA 325

Query: 176 NVANQNTKLPAVRLKRMTASL 196
           ++    T L   R ++++A+L
Sbjct: 326 SLLQPVTPLGTSRWRKISAAL 346


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.130    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,098,052
Number of Sequences: 37866
Number of extensions: 353472
Number of successful extensions: 1020
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 39
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.