Guide to the Human Genome
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Name: MTFR1 Sequence: fasta or formatted (333aa) NCBI GI: 224994160
Description:

mitochondrial fission regulator 1 isoform 1

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [300aa] mitochondrial fission regulator 1 isoform 2
alt prot [348aa] mitochondrial fission regulator 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         28           2
 C cysteine            0.9          3           1
 D aspartate           4.2         14           2
 E glutamate           8.1         27           2
 F phenylalanine       2.4          8           2
 G glycine             4.2         14           1
 H histidine           1.5          5           1
 I isoleucine          4.8         16           1
 K lysine              8.1         27           3
 L leucine             9.6         32           2
 M methionine          2.4          8           1
 N asparagine          3.3         11           2
 P proline             9.3         31           7
 Q glutamine           5.7         19           2
 R arginine            6.0         20           2
 S serine              8.7         29           2
 T threonine           4.2         14           2
 V valine              6.0         20           1
 W tryptophan          1.2          4           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial fission regulator 1 isoform 1 
MTFR1                 0.931   mitochondrial fission regulator 1 isoform 3 
MTFR1                 0.869   mitochondrial fission regulator 1 isoform 2 
FAM54A                0.168   DUF729 domain containing 1 
FAM54A                0.168   DUF729 domain containing 1 
FAM54B                0.104   hypothetical protein LOC56181 isoform a 
FAM54B                0.104   hypothetical protein LOC56181 isoform a 
FAM54B                0.104   hypothetical protein LOC56181 isoform a 
FAM54B                0.083   hypothetical protein LOC56181 isoform b 
WASL                  0.035   Wiskott-Aldrich syndrome gene-like protein 
NCOR2                 0.031   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.031   nuclear receptor co-repressor 2 isoform 1 
LMOD2                 0.030   leiomodin 2 (cardiac) 
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.028   Wiskott-Aldrich syndrome protein family member 1 [Hom...
KIAA1598              0.027   shootin1 isoform a 
MEX3C                 0.027   ring finger and KH domain containing 2 
JMY                   0.025   junction-mediating and regulatory protein 
FMNL3                 0.025   formin-like 3 isoform 2 
FMNL3                 0.025   formin-like 3 isoform 1 
WASF3                 0.024   WAS protein family, member 3 
ZIC5                  0.024   zinc finger protein of the cerebellum 5 
ZNF318                0.024   zinc finger protein 318 
NCOR1                 0.024   nuclear receptor co-repressor 1 
HOXD3                 0.024   homeobox D3 
KIAA1598              0.024   shootin1 isoform b 
YLPM1                 0.024   YLP motif containing 1 
PDE4D                 0.022   phosphodiesterase 4D isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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