Guide to the Human Genome
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Name: MTFR1 Sequence: fasta or formatted (300aa) NCBI GI: 224994162
Description:

mitochondrial fission regulator 1 isoform 2

Referenced in:

Bone and Related Tissues

Other entries for this name:
alt prot [333aa] mitochondrial fission regulator 1 isoform 1
alt prot [348aa] mitochondrial fission regulator 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         28           2
 C cysteine            0.7          2           1
 D aspartate           4.7         14           2
 E glutamate           9.0         27           2
 F phenylalanine       2.3          7           2
 G glycine             4.0         12           1
 H histidine           1.7          5           1
 I isoleucine          4.3         13           1
 K lysine              8.3         25           3
 L leucine             9.7         29           2
 M methionine          2.7          8           1
 N asparagine          3.3         10           2
 P proline             9.7         29           7
 Q glutamine           5.3         16           2
 R arginine            5.3         16           2
 S serine              8.0         24           1
 T threonine           4.3         13           2
 V valine              5.7         17           1
 W tryptophan          1.0          3           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial fission regulator 1 isoform 2 
MTFR1                 0.970   mitochondrial fission regulator 1 isoform 1 
MTFR1                 0.893   mitochondrial fission regulator 1 isoform 3 
FAM54A                0.135   DUF729 domain containing 1 
FAM54A                0.135   DUF729 domain containing 1 
FAM54B                0.065   hypothetical protein LOC56181 isoform a 
FAM54B                0.065   hypothetical protein LOC56181 isoform a 
FAM54B                0.065   hypothetical protein LOC56181 isoform a 
FAM54B                0.042   hypothetical protein LOC56181 isoform b 
WASL                  0.039   Wiskott-Aldrich syndrome gene-like protein 
NCOR2                 0.035   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.035   nuclear receptor co-repressor 2 isoform 1 
LMOD2                 0.033   leiomodin 2 (cardiac) 
WASF1                 0.032   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.032   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.032   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.032   Wiskott-Aldrich syndrome protein family member 1 [Hom...
KIAA1598              0.030   shootin1 isoform a 
MEX3C                 0.030   ring finger and KH domain containing 2 
JMY                   0.028   junction-mediating and regulatory protein 
FMNL3                 0.028   formin-like 3 isoform 2 
FMNL3                 0.028   formin-like 3 isoform 1 
WASF3                 0.026   WAS protein family, member 3 
ZIC5                  0.026   zinc finger protein of the cerebellum 5 
ZNF318                0.026   zinc finger protein 318 
NCOR1                 0.026   nuclear receptor co-repressor 1 
HOXD3                 0.026   homeobox D3 
KIAA1598              0.026   shootin1 isoform b 
YLPM1                 0.026   YLP motif containing 1 
PDE4D                 0.025   phosphodiesterase 4D isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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