FAM54B 5266

Name: FAM54B	Sequence: fasta or formatted (292aa)		NCBI GI: 153251766
Description: hypothetical protein LOC56181 isoform a		Referenced in: Bone and Related Tissues
Other entries for this name: alt mRNA [292aa] hypothetical protein LOC56181 isoform a alt mRNA [292aa] hypothetical protein LOC56181 isoform a alt prot [205aa] hypothetical protein LOC56181 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 27 2 C cysteine 2.7 8 2 D aspartate 5.5 16 2 E glutamate 7.9 23 3 F phenylalanine 2.7 8 1 G glycine 2.7 8 1 H histidine 2.1 6 1 I isoleucine 4.8 14 1 K lysine 5.1 15 2 L leucine 10.6 31 2 M methionine 2.1 6 2 N asparagine 2.7 8 1 P proline 8.2 24 2 Q glutamine 2.1 6 1 R arginine 6.5 19 2 S serine 12.7 37 3 T threonine 5.1 15 2 V valine 5.8 17 2 W tryptophan 1.0 3 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC56181 isoform a FAM54B 1.000 hypothetical protein LOC56181 isoform a FAM54B 1.000 hypothetical protein LOC56181 isoform a FAM54B 0.500 hypothetical protein LOC56181 isoform b FAM54A 0.130 DUF729 domain containing 1 FAM54A 0.130 DUF729 domain containing 1 MTFR1 0.119 mitochondrial fission regulator 1 isoform 3 MTFR1 0.119 mitochondrial fission regulator 1 isoform 1 MTFR1 0.067 mitochondrial fission regulator 1 isoform 2 CDC42BPG 0.016 CDC42 binding protein kinase gamma (DMPK-like) [Hom... LOC100133408 0.016 PREDICTED: similar to mucin NUP153 0.014 nucleoporin 153kDa LMNA 0.014 lamin A/C isoform 3 LMNA 0.014 lamin A/C isoform 2 LMNA 0.014 lamin A/C isoform 1 precursor ODZ3 0.013 odz, odd Oz/ten-m homolog 3 JUND 0.011 jun D proto-oncogene LOC100133761 0.011 PREDICTED: similar to Mucin-6, partial KIF1A 0.011 axonal transport of synaptic vesicles KCNC2 0.011 Shaw-related voltage-gated potassium channel protein... KCNC2 0.011 Shaw-related voltage-gated potassium channel protein... KCNC2 0.011 Shaw-related voltage-gated potassium channel protein... ODZ1 0.009 odz, odd Oz/ten-m homolog 1 isoform 3 ODZ1 0.009 odz, odd Oz/ten-m homolog 1 isoform 2 ODZ1 0.009 odz, odd Oz/ten-m homolog 1 isoform 1 TCF7L2 0.009 transcription factor 7-like 2 isoform 3 MTRR 0.009 methionine synthase reductase isoform 1 MTRR 0.009 methionine synthase reductase isoform 2 VASP 0.009 vasodilator-stimulated phosphoprotein STIL 0.009 SCL/TAL1 interrupting locus isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.