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Search of human proteins with 153082752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153082752 interferon regulatory factor 2 [Homo sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153082752 interferon regulatory factor 2 [Homo sapiens] 712 0.0
gi|4504721 interferon regulatory factor 1 [Homo sapiens] 224 9e-59
gi|167555104 interferon regulatory factor 4 [Homo sapiens] 121 1e-27
gi|4504567 interferon regulatory factor 8 [Homo sapiens] 117 1e-26
gi|5453700 interferon regulatory factor 6 [Homo sapiens] 115 4e-26
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 114 1e-25
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 114 1e-25
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 112 4e-25
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 112 4e-25
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 112 4e-25
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 112 4e-25
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 112 4e-25
gi|25282407 interferon-stimulated transcription factor 3, gamma ... 97 3e-20
gi|4504725 interferon regulatory factor 3 [Homo sapiens] 83 4e-16
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 66 5e-11
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 66 5e-11
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 66 5e-11
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] 47 3e-05
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] 47 3e-05
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ... 47 3e-05
gi|40254834 kinesin family member 1C [Homo sapiens] 44 2e-04
gi|91982772 mucin 17 [Homo sapiens] 40 0.003
gi|169183877 PREDICTED: similar to hCG1742476 [Homo sapiens] 33 0.29
gi|169179771 PREDICTED: similar to hCG1742476 [Homo sapiens] 33 0.29
gi|239743692 PREDICTED: hypothetical protein LOC402360 [Homo sap... 33 0.29
gi|118600969 C-type lectin domain family 17, member A [Homo sapi... 33 0.50
gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens] 33 0.50
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 33 0.50
gi|190886435 RALBP1 associated Eps domain containing 1 isoform a... 32 0.65
gi|190886437 RALBP1 associated Eps domain containing 1 isoform b... 32 0.65
>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
Length = 349
Score = 712 bits (1838), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI 60
MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI
Sbjct: 1 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI 60
Query: 61 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK 120
HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK
Sbjct: 61 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK 120
Query: 121 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ 180
KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ
Sbjct: 121 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ 180
Query: 181 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP 240
SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP
Sbjct: 181 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP 240
Query: 241 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP 300
SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP
Sbjct: 241 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVP 300
Query: 301 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC 349
YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC
Sbjct: 301 YNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSDITQARVKSC 349
>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
Length = 325
Score = 224 bits (571), Expect = 9e-59
Identities = 125/274 (45%), Positives = 171/274 (62%), Gaps = 24/274 (8%)
Query: 1 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI 60
MP+ RMRMRPWLE QINSN IPGL W+NKE+ IFQIPW HAA+HGWD+ KDA LFR+WAI
Sbjct: 1 MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI 60
Query: 61 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSK 120
HTG+++ G +PDPKTWKANFRCAMNSLPDIEEVKD+S KG++A RVYRMLP + +
Sbjct: 61 HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR 120
Query: 121 KGKKPKTEKEDKVKHIKQEPVESSLG-LSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVG 179
K +K K+ ++ K K ++ +SS S+G+S +ST+ ++ S V G
Sbjct: 121 KERKSKSSRDAKSKAKRKSCGDSSPDTFSDGLS---------SSTLPDDHSS---YTVPG 168
Query: 180 QSHLDSNIENQEIVTNPPDICQVVEVTTE----SDEQPVSMSELYPLQISPVSSYAESET 235
++E ++ +T C V + + P S S+LY Q+SP+ S +E+ T
Sbjct: 169 YM---QDLEVEQALTPALSPCAVSSTLPDWHIPVEVVPDSTSDLYNFQVSPMPSTSEATT 225
Query: 236 TD----SVPSDEESAEGRPHWRKRNIEGKQYLSN 265
+ +P D + W+ N++GK YL N
Sbjct: 226 DEDEEGKLPEDIMKLLEQSEWQPTNVDGKGYLLN 259
>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
Length = 451
Score = 121 bits (303), Expect = 1e-27
Identities = 55/127 (43%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Query: 7 RMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQ 66
++R WL +QI+S PGL W N+EK IF+IPW HA + ++ E+DA LF+ WA+ GK +
Sbjct: 23 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 82
Query: 67 PGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPK 126
G+DKPDP TWK RCA+N D EE+ ++S ++ ++VYR++P +KKG K
Sbjct: 83 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVP---EGAKKGAKQL 139
Query: 127 TEKEDKV 133
T ++ ++
Sbjct: 140 TLEDPQM 146
>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
Length = 426
Score = 117 bits (294), Expect = 1e-26
Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Query: 7 RMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQ 66
R+R WL EQI+S+ PGL W N+EK +F+IPW HA + ++ E DA +F+ WA+ GK +
Sbjct: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68
Query: 67 PGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKG 122
G DK +P TWK RCA+N PD EEV D+S + ++VYR++P E+ K G
Sbjct: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVPEEEQKCKLG 123
>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
Length = 467
Score = 115 bits (289), Expect = 4e-26
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 6/141 (4%)
Query: 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
R+R++PWL Q++S PGL WL+++ K FQIPW HA RH E++ +F+ WA+ TGK
Sbjct: 7 RVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGK 66
Query: 65 HQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSE------RP 118
+Q GVD PDP WKA RCA+N + + D + + N ++Y++ + + P
Sbjct: 67 YQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINP 126
Query: 119 SKKGKKPKTEKEDKVKHIKQE 139
G P EK++ V +E
Sbjct: 127 GSTGSAPWDEKDNDVDEEDEE 147
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 114 bits (286), Expect = 1e-25
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSD---LSPEYAVLTSTIK 166
+P + E+E++ + +++ + SL L++ V ++P Y++L +K
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR--MLPSLSLTDAVQSGPHMTP-YSLLKEDVK 180
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 114 bits (286), Expect = 1e-25
Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSD---LSPEYAVLTSTIK 166
+P + E+E++ + +++ + SL L++ V ++P Y++L +K
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR--MLPSLSLTDAVQSGPHMTP-YSLLKEDVK 180
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 112 bits (281), Expect = 4e-25
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQ 138
+P + E+E++ + +++
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR 152
>gi|148833496 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 112 bits (281), Expect = 4e-25
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQ 138
+P + E+E++ + +++
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR 152
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 112 bits (281), Expect = 4e-25
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQ 138
+P + E+E++ + +++
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR 152
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 112 bits (281), Expect = 4e-25
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQ 138
+P + E+E++ + +++
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR 152
>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
Length = 498
Score = 112 bits (281), Expect = 4e-25
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 5/142 (3%)
Query: 2 PVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIH 61
P R+R++PWL Q+NS PGL+W+N EKK+F IPW HA RHG + D +F+ WA
Sbjct: 11 PPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKE 70
Query: 62 TGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRM-----LPLSE 116
TGK+ GVD+ DP WKAN RCA+N D + D +++Y + P
Sbjct: 71 TGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSNGPAPTDS 130
Query: 117 RPSKKGKKPKTEKEDKVKHIKQ 138
+P + E+E++ + +++
Sbjct: 131 QPPEDYSFGAGEEEEEEEELQR 152
>gi|25282407 interferon-stimulated transcription factor 3, gamma
48kDa [Homo sapiens]
Length = 393
Score = 96.7 bits (239), Expect = 3e-20
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 7 RMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQ 66
++R W+ EQ+ S PG+ W + K +F+IPW HA + + ++DA F+ WAI GK++
Sbjct: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
Query: 67 PGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGKKPK 126
G D P WK RCA+N + +EV ++ ++VY++LP P +P
Sbjct: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLLP----PGIVSGQPG 125
Query: 127 TEK-EDKVKH--IKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHL 183
T+K K +H + E E + N LSP +VL ++ NE + G H
Sbjct: 126 TQKVPSKRQHSSVSSERKEEEDAMQN--CTLSP--SVLQDSLNNEEEGASG----GAVHS 177
Query: 184 DSNIENQEIVTNPPDICQVVEVTTESDEQ 212
D + P ++ E + D++
Sbjct: 178 DIGSSSSSSSPEPQEVTDTTEAPFQGDQR 206
>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
Length = 427
Score = 82.8 bits (203), Expect = 4e-16
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 1 MPVERMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAI 60
M + R+ PWL Q++ + G+ W+NK + F+IPW H R E D +F+ WA
Sbjct: 1 MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQE-DFGIFQAWAE 59
Query: 61 HTGKHQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRML 112
TG + PG DKPD TWK NFR A+N + +D+S K ++ ++Y +
Sbjct: 60 ATGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRS-KDPHDPHKIYEFV 110
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 65.9 bits (159), Expect = 5e-11
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
R+ WL +I+S GL+WL++ + F++PW H AR E DA +F+ WA+ G+
Sbjct: 24 RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGR 82
Query: 65 HQP----GVDKPDPKT-----WKANFRCAMNSLPDIEEVKDKS 98
P G P+ +T WK NFRCA+ S ++D S
Sbjct: 83 WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNS 125
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 65.9 bits (159), Expect = 5e-11
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
R+ WL +I+S GL+WL++ + F++PW H AR E DA +F+ WA+ G+
Sbjct: 11 RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGR 69
Query: 65 HQP----GVDKPDPKT-----WKANFRCAMNSLPDIEEVKDKS 98
P G P+ +T WK NFRCA+ S ++D S
Sbjct: 70 WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNS 112
>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
Length = 474
Score = 65.9 bits (159), Expect = 5e-11
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
R+ WL +I+S GL+WL++ + F++PW H AR E DA +F+ WA+ G+
Sbjct: 11 RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLS-EADARIFKAWAVARGR 69
Query: 65 HQP----GVDKPDPKT-----WKANFRCAMNSLPDIEEVKDKS 98
P G P+ +T WK NFRCA+ S ++D S
Sbjct: 70 WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNS 112
>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 15 QINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQPGVDKPDP 74
QI S GL W + K +F+IPW H A+ G ++ W +H GKH G +K P
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEAP 66
>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 15 QINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQPGVDKPDP 74
QI S GL W + K +F+IPW H A+ G ++ W +H GKH G +K P
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEAP 66
>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 15 QINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGKHQPGVDKPDP 74
QI S GL W + K +F+IPW H A+ G ++ W +H GKH G +K P
Sbjct: 16 QIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEAP 66
>gi|40254834 kinesin family member 1C [Homo sapiens]
Length = 1103
Score = 44.3 bits (103), Expect = 2e-04
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 175 IIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESE 234
+I + Q H D N E E+ PP+ + E SD P + PL SS+
Sbjct: 871 VIPLAQDHEDENEEGGEVPWAPPEGSEAAEEAAPSDRMPSARPPSPPL-----SSW--ER 923
Query: 235 TTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKE 294
+ + D GR W K+ Q L G RG L A FV + D ++
Sbjct: 924 VSRLMEEDPAFRRGRLRWLKQEQLRLQGLQGSGGRGGGLRRPPARFVPPH--DCKLRFPF 981
Query: 295 ESNPVPYNSSWP---------PFQDLPLSSSMTPASSSSRPDRETRASVIKKTS 339
+SNP + SWP P Q P + PA+ + RP R+ ++ S
Sbjct: 982 KSNP-QHRESWPGMGSGEAPTPLQP-PEEVTPHPATPARRPPSPRRSHHPRRNS 1033
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 40.0 bits (92), Expect = 0.003
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 18/215 (8%)
Query: 148 SNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTT 207
S G + L+ T + +E + V + + ++ E T DI VV ++T
Sbjct: 2452 SEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDI--VVPIST 2509
Query: 208 ESDEQ-----------PVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRN 256
S+ PV+ E L +PV S + T+ + S SAEG
Sbjct: 2510 ASEGSTLLTSIPVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTY 2569
Query: 257 IEGKQYLSNMGTRGSYLLPGMASFVTSNKPD--LQVTIKEESNPVP---YNSSWPPFQDL 311
EG L +M L AS +++ D + VT E++ P ++S P
Sbjct: 2570 SEGSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTPS 2629
Query: 312 PLSSSMTPASSSSRPDRETRASVIKKTSDITQARV 346
+S+S+T S+ P + AS + T T+ V
Sbjct: 2630 EVSTSLTSILVSTMPVASSEASTLSTTPVDTRTLV 2664
Score = 37.7 bits (86), Expect = 0.015
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 8/190 (4%)
Query: 154 LSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQP 213
+S E + L++T VD++ + ++ + E I T+ P + P
Sbjct: 3177 VSSEDSTLSAT---PVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTP 3233
Query: 214 VSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYL 273
V+ SE L +PV S T+ S +AEG EG L++M + +
Sbjct: 3234 VASSEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTV 3293
Query: 274 LPGMASFVTSNKPDLQVTI-----KEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDR 328
S +++ D + S P+ +S P S+ +T S S+ P
Sbjct: 3294 ASSETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVV 3353
Query: 329 ETRASVIKKT 338
+ AS + T
Sbjct: 3354 SSEASTLSTT 3363
Score = 37.4 bits (85), Expect = 0.020
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 32/192 (16%)
Query: 148 SNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTT 207
S G + L+ T + +E ++ V ++ + ++ E ++PP +V + T
Sbjct: 1156 SEGTTPLASMPVSTTLVVSSEANTLSTTPVDSKTQVATSTE----ASSPPPTAEVTSMPT 1211
Query: 208 ESDEQ-------------PVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRK 254
+ + PV+ SE L SPV + T+ S +AEG
Sbjct: 1212 STPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVTTSAETSSSPTTAEGTSLPTS 1271
Query: 255 RNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLS 314
EG L++ +P + VTS + +T P ++ P +S
Sbjct: 1272 TTSEGSTLLTS--------IPVSTTLVTSPEASTLLT-------TPVDTKGPVVTSNEVS 1316
Query: 315 SSMTPASSSSRP 326
SS TPA +S P
Sbjct: 1317 SSPTPAEGTSMP 1328
Score = 36.2 bits (82), Expect = 0.045
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 8/190 (4%)
Query: 154 LSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQP 213
+S E L++T +DS + ++ + E + + P + + P
Sbjct: 1586 VSSEANTLSTT---PIDSKTQVTASTEASSSTTAEGSSMTISTPSEGSPLLTSIPVSTTP 1642
Query: 214 VSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYL 273
V+ E L +PV S + T+ V S AEG EG+ L+++ R + +
Sbjct: 1643 VASPEASTLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPV 1702
Query: 274 LPGMASFVTSNKPD--LQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASS---SSRPDR 328
S +++ D VT E+ P S + S TP +S S+ P
Sbjct: 1703 ASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVL 1762
Query: 329 ETRASVIKKT 338
+ AS + T
Sbjct: 1763 SSEASTLSAT 1772
Score = 33.1 bits (74), Expect = 0.38
Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 4/171 (2%)
Query: 155 SPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPV 214
SPE + L++T + + V S + + T + +T + PV
Sbjct: 1645 SPEASTLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTT--PV 1702
Query: 215 SMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLL 274
+ S + L +PV + T+ S ++EG EG L+++ + +L
Sbjct: 1703 ASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVL 1762
Query: 275 PGMASFVTSNKPDLQ--VTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSS 323
AS +++ D VT E+ P + LS MTP +S+
Sbjct: 1763 SSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTST 1813
Score = 33.1 bits (74), Expect = 0.38
Identities = 53/234 (22%), Positives = 86/234 (36%), Gaps = 27/234 (11%)
Query: 142 ESSLGLSNGVSDLSPEYAVLTSTIKNE-VDSTVNIIVVGQSHLD-SNIENQEIVTNPPDI 199
E S L+N +P + ST+ VD++ + ++ L + E I T+ P
Sbjct: 3337 EGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSE 3396
Query: 200 CQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEG 259
+ PV SE+ L +PV S T+ S AEG EG
Sbjct: 3397 GTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEG 3456
Query: 260 KQYLSNMGTRGSYLLPGMASFVTSNKPDLQ--VTIKEESNPVPYN---SSWP-------- 306
LS M + + AS +++ D VT +N P +S P
Sbjct: 3457 STPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGS 3516
Query: 307 -PFQDLPLSS-----------SMTPASSSSRPDRETRASVIKKTSDITQARVKS 348
P ++P+S+ S TP S++ ++AS T +T R+ +
Sbjct: 3517 TPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMST 3570
Score = 32.7 bits (73), Expect = 0.50
Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 21/210 (10%)
Query: 154 LSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSN---IENQEIVTNPPDICQVVEVTTESD 210
+S E + L++T + NI V+ + S+ E I T+ +T +
Sbjct: 288 VSSEASTLSTT-----PAATNIPVITSTEASSSPTTAEGTSIPTSTYTEGSTPLTSTPAS 342
Query: 211 EQPVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRG 270
PV+ SE+ L I+PV + T+ S +AE EG L+NM
Sbjct: 343 TMPVATSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVST 402
Query: 271 SYLLPGMASFVTSNKPDLQ--VTIKEESNPVPYN-------SSWPPFQDLPLSS---SMT 318
+ AS ++ D + VT E++ P +S P PL+S S T
Sbjct: 403 ILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTT 462
Query: 319 PASSSSRPDRETRASVIKKTSDITQARVKS 348
P +SS + T V KT T S
Sbjct: 463 PVASSEASNLST-TPVDSKTQVTTSTEASS 491
Score = 31.6 bits (70), Expect = 1.1
Identities = 47/210 (22%), Positives = 71/210 (33%), Gaps = 19/210 (9%)
Query: 119 SKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNE-VDSTVNIIV 177
S+ P T ++ + P E S L++ +P + S + VDS +
Sbjct: 428 SEASSSPTTAEDTSIA--TSTPSEGSTPLTSMPVSTTPVASSEASNLSTTPVDSKTQVTT 485
Query: 178 VGQ-SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETT 236
+ S E + T+ P + PV+ SE L +PV + T+
Sbjct: 486 STEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTLSTTPVDTSTPVTTS 545
Query: 237 DSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEES 296
S + EG EG L+NM P V S++ T +S
Sbjct: 546 SEASSSSTTPEGTSIPTSTPSEGSTPLTNM--------PVSTRLVVSSEASTTSTTPADS 597
Query: 297 NPVPYNSSWPPFQDLPLSSSMTPASSSSRP 326
N SS SSS T A +S P
Sbjct: 598 NTFVTTSS-------EASSSSTTAEGTSMP 620
Score = 29.6 bits (65), Expect = 4.2
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 214 VSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYL 273
V+ SE L +PV S T+ S +AEG EG L++M + +
Sbjct: 641 VASSEASTLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTTLV 700
Query: 274 LPGMASFVTSNKPDLQ--VTIKEESNPVPYNSSWPPFQDLPLSSSMTPASS 322
AS +++ D VT E++ P + S TP +S
Sbjct: 701 ASSEASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTS 751
Score = 29.6 bits (65), Expect = 4.2
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 14/142 (9%)
Query: 213 PVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSY 272
PV+ E L +PV S + T+ V S AEG EG+ L++M +
Sbjct: 817 PVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTL 876
Query: 273 LLPGMASFVTSNKPDLQ--VTIKEESNPVPYNS-------SWPPFQDLPLSS---SMTPA 320
+ S +++ D VT E+ P S S P PL+S S TP
Sbjct: 877 VATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGEGSTPLTSMPDSTTPV 936
Query: 321 SSSSRPDRETRASVIKKTSDIT 342
SS R A+ + ++ +T
Sbjct: 937 VSSEA--RTLSATPVDTSTPVT 956
Score = 29.6 bits (65), Expect = 4.2
Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 24/210 (11%)
Query: 115 SERPSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVN 174
S P++ P + + + PV ++L S+ +S LS T+ + N T +
Sbjct: 1318 SPTPAEGTSMPTSTYSEGRTPLTSIPVNTTLVASSAISILS------TTPVDNSTPVTTS 1371
Query: 175 IIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESE 234
+ E + + P + PV SE L +PV +
Sbjct: 1372 TEACSSP---TTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPGT 1428
Query: 235 TTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKE 294
T+ S +AEG EGK L ++ + + AS +++
Sbjct: 1429 TSAEATSSPTTAEGISIPTSTPSEGKTPLKSIPVSNTPVANSEASTLST----------- 1477
Query: 295 ESNPVPYNSSWPPFQDLPLSSSMTPASSSS 324
P +S+ P +SSS TPA +S
Sbjct: 1478 ----TPVDSNSPVVTSTAVSSSPTPAEGTS 1503
Score = 29.6 bits (65), Expect = 4.2
Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 9/215 (4%)
Query: 140 PVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNP--- 196
P + S L++ + P + ST+ T +I V + S+ E+ + P
Sbjct: 2746 PSDGSTPLTSILVSTLPVASSEASTVSTTAVDT-SIPVTTSTEASSSPTTAEVTSMPTST 2804
Query: 197 PDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRN 256
P + + PV+ SE L +PV + T+ S +AEG
Sbjct: 2805 PSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTA 2864
Query: 257 IEGKQYLSNMGTRGSYLLPGMASFVTSNKPD--LQVTIKEESNPVP---YNSSWPPFQDL 311
EG L+++ + + AS +++ D + VT E + P +S P
Sbjct: 2865 SEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPS 2924
Query: 312 PLSSSMTPASSSSRPDRETRASVIKKTSDITQARV 346
+S+ +T S+ P + AS + T T+ V
Sbjct: 2925 EVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPV 2959
Score = 29.3 bits (64), Expect = 5.5
Identities = 47/237 (19%), Positives = 83/237 (35%), Gaps = 34/237 (14%)
Query: 131 DKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQSHLDSNIENQ 190
D+ + PV +++ S+ +S LS ++ + N ++ + + E
Sbjct: 2158 DRRTPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSS---------PTTSEGT 2208
Query: 191 EIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRP 250
+ T+ P + PV SE L +PV + T+ S +AEG
Sbjct: 2209 SMPTSTPSEGSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAEGTS 2268
Query: 251 HWRKRNIEGKQYLSNMGTRGSYLLPGMASF-----VTSNKPDLQVTIKEESNPVPYNSSW 305
EG L+++ + + S V SN P T P +S
Sbjct: 2269 IPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSM 2328
Query: 306 P---------PFQDLPLSSSM-----------TPASSSSRPDRETRASVIKKTSDIT 342
P P +P+S++M TPA +S+ ++A T+D T
Sbjct: 2329 PTSTSSEGNTPLTRMPVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTADDT 2385
Score = 29.3 bits (64), Expect = 5.5
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 213 PVSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSY 272
PV+ SE L +PV + T+ S +AEG E L+N+ +
Sbjct: 2644 PVASSEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTSTPGERSTPLTNILVSTTL 2703
Query: 273 LLPGMASFVTSNKPDLQ--VTIKEESNPVPYNSSWPPFQDLPLSSSMTPASS---SSRPD 327
L AS +++ D VT E++ P + + S TP +S S+ P
Sbjct: 2704 LANSEASTLSTTPVDTSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPV 2763
Query: 328 RETRASVIKKTS 339
+ AS + T+
Sbjct: 2764 ASSEASTVSTTA 2775
Score = 28.9 bits (63), Expect = 7.2
Identities = 50/207 (24%), Positives = 67/207 (32%), Gaps = 36/207 (17%)
Query: 121 KGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIVVGQ 180
+G P T D PV SS + + + V TST +T
Sbjct: 921 EGSTPLTSMPDSTT-----PVVSSEARTLSATPVDTSTPVTTSTEATSSPTTA------- 968
Query: 181 SHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTDSVP 240
E I T+ P +T V+ SE L +PV S T+
Sbjct: 969 -------EGTSIPTSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEAS 1021
Query: 241 SDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPD-LQVTIKEESNPV 299
S +AEG EG L+ M P + V S++ L T + S PV
Sbjct: 1022 SPPPTAEGTSMPTSTPSEGSTPLTRM--------PVSTTMVASSETSTLSTTPADTSTPV 1073
Query: 300 PYNSSWPPFQDLPLSSSMTPASSSSRP 326
S SSS T A +S P
Sbjct: 1074 TTYSQ--------ASSSSTTADGTSMP 1092
Score = 28.9 bits (63), Expect = 7.2
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 214 VSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYL 273
V+ SE+ L +PV S T+ S +AEG + EG L+ M +
Sbjct: 2291 VANSEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTM- 2349
Query: 274 LPGMASFVTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRP 326
+ASF TS L T + S PV S SS T A +S P
Sbjct: 2350 ---VASFETST---LSTTPADTSTPVTTYSQ--------AGSSPTTADDTSMP 2388
>gi|169183877 PREDICTED: similar to hCG1742476 [Homo sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.29
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 91 IEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGK---KPKTEKEDKVKHIKQEPVESSLGL 147
++ +K + ++ A + R L E P + K KPK +K+ K + QE
Sbjct: 79 MDVMKTEMVQAEKTAAEIIRKLEKQETPEECAKTSVKPKKKKKQKPQEAPQE-------- 130
Query: 148 SNGVSDLSPEYAV-----------LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNP 196
NG+ D S ++ L S+ + E ++++ + ++ +E V +P
Sbjct: 131 -NGIKDPSNSFSKPNKRKSFSKEKLVSSHREETAGSISL-----PNRKTSSPKEEAVNDP 184
Query: 197 PDICQVVEVTTESDEQPVSMSELYPL----QISPVSSYAESETTDSVPSDEESAEGRP 250
+ ++ P EL SS + + VP ++ESA GRP
Sbjct: 185 KEAGNRSVTKKKTGNSPSKRKELVSSGPEEAAGSKSSSKKKKKLHKVPQEDESANGRP 242
>gi|169179771 PREDICTED: similar to hCG1742476 [Homo sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.29
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 91 IEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGK---KPKTEKEDKVKHIKQEPVESSLGL 147
++ +K + ++ A + R L E P + K KPK +K+ K + QE
Sbjct: 79 MDVMKTEMVQAEKTAAEIIRKLEKQETPEECAKTSVKPKKKKKQKPQEAPQE-------- 130
Query: 148 SNGVSDLSPEYAV-----------LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNP 196
NG+ D S ++ L S+ + E ++++ + ++ +E V +P
Sbjct: 131 -NGIKDPSNSFSKPNKRKSFSKEKLVSSHREETAGSISL-----PNRKTSSPKEEAVNDP 184
Query: 197 PDICQVVEVTTESDEQPVSMSELYPL----QISPVSSYAESETTDSVPSDEESAEGRP 250
+ ++ P EL SS + + VP ++ESA GRP
Sbjct: 185 KEAGNRSVTKKKTGNSPSKRKELVSSGPEEAAGSKSSSKKKKKLHKVPQEDESANGRP 242
>gi|239743692 PREDICTED: hypothetical protein LOC402360 [Homo
sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.29
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 91 IEEVKDKSIKKGNNAFRVYRMLPLSERPSKKGK---KPKTEKEDKVKHIKQEPVESSLGL 147
++ +K + ++ A + R L E P + K KPK +K+ K + QE
Sbjct: 79 MDVMKTEMVQAEKTAAEIIRKLEKQETPEECAKTSVKPKKKKKQKPQEAPQE-------- 130
Query: 148 SNGVSDLSPEYAV-----------LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNP 196
NG+ D S ++ L S+ + E ++++ + ++ +E V +P
Sbjct: 131 -NGIKDPSNSFSKPNKRKSFSKEKLVSSHREETAGSISL-----PNRKTSSPKEEAVNDP 184
Query: 197 PDICQVVEVTTESDEQPVSMSELYPL----QISPVSSYAESETTDSVPSDEESAEGRP 250
+ ++ P EL SS + + VP ++ESA GRP
Sbjct: 185 KEAGNRSVTKKKTGNSPSKRKELVSSGPEEAAGSKSSSKKKKKLHKVPQEDESANGRP 242
>gi|118600969 C-type lectin domain family 17, member A [Homo
sapiens]
Length = 289
Score = 32.7 bits (73), Expect = 0.50
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 291 TIKEESNPVPYNSSWPPFQDLPLSSSMTPASS---SSRPDRETRAS 333
T++EE Y +S PP++DLP ++T + S SS P R RA+
Sbjct: 42 TMEEEEEDDDYENSTPPYKDLPPKPALTLSFSSPGSSAPPRPPRAA 87
Score = 28.9 bits (63), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 286 PDLQVTIKEESNPVPYNSSWPPFQDLP 312
PD T++EE Y +S PP++DLP
Sbjct: 11 PDPPGTMEEEEEDDDYENSTPPYKDLP 37
>gi|19913408 DNA topoisomerase II, beta isozyme [Homo sapiens]
Length = 1621
Score = 32.7 bits (73), Expect = 0.50
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 11/216 (5%)
Query: 118 PSKKGKKPKTEKEDKVKHIKQEPVESSLGLSNGVSDLSPEYAVLTSTIKNEVDSTVNIIV 177
P KG KPK EK++ +++ P S + V +P ++ S +++++ T +++
Sbjct: 1291 PINKGPKPKREKKEPGTRVRKTPTSSGKPSAKKVKKRNP-WSDDESKSESDLEETEPVVI 1349
Query: 178 VGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQPVSMSELYPLQISPVSSYAESETTD 237
S L + T D + + + D+ + E ++ SP+++ E E
Sbjct: 1350 PRDSLLRRAAAERPKYTF--DFSEEEDDDADDDDDDNNDLEELKVKASPITNDGEDEFVP 1407
Query: 238 SVPSDEESAEGRPHWRKRNIEGKQYLSNMGTRGSYLLPGMASFVTSNKPDLQVTIKEESN 297
S D++ P K E ++ + S + SF + ++ + K +SN
Sbjct: 1408 SDGLDKDEYTFSPGKSKATPE-----KSLHDKKSQDFGNLFSFPSYSQKSEDDSAKFDSN 1462
Query: 298 PVPYNSSWPPFQDLPLSS---SMTPASSSSRPDRET 330
S + P L + S T A+ +P +T
Sbjct: 1463 EEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSSDT 1498
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 32.7 bits (73), Expect = 0.50
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 29/198 (14%)
Query: 155 SPEYAV-LTSTIKNEVDSTVNIIVVGQSHLDSNIENQEIVTNPPDICQVVEVTTESDEQP 213
SPE V +T TIKN N V + +DS ++ ++ VT I ++ E E
Sbjct: 135 SPELQVKVTKTIKNGFLHFENFTCVDDADVDSEMDPEQPVTEDESIEEIFE------ETQ 188
Query: 214 VSMSELYPLQISPVSSYAESETTDSVPSDEESAEGRPHW----RKRNIEGKQYLSNMGT- 268
+ + Y + A DS P A P + + KQ G+
Sbjct: 189 TNATCNYETKSENGVKVAMGSEQDSTPESRHGAVKSPFLPLAPQTETQKNKQRNEVDGSN 248
Query: 269 RGSYLLPGMASFVTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMT-------PAS 321
+ LLP S D +TI+E+ N + + FQD P SS+ T P +
Sbjct: 249 EKAALLPAPFSL-----GDTNITIEEQLNSINLS-----FQDDPDSSTSTLGNMLELPGT 298
Query: 322 SSSRPDRETRASVIKKTS 339
SSS +E KK S
Sbjct: 299 SSSSTSQELPFCQPKKKS 316
>gi|190886435 RALBP1 associated Eps domain containing 1 isoform a
[Homo sapiens]
Length = 795
Score = 32.3 bits (72), Expect = 0.65
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 224 ISPVSSYAESETTDSVPSDEESAEGRPH-WRK--RNIEGKQYLSNMGTRGSYLLPGMASF 280
+ P +S E V S ++S PH WRK R+ G + G + P +
Sbjct: 149 VQPRTSADAQEPASPVVSPQQSPPTSPHTWRKHSRHPSGGNSERPLAGPGPFWSPFGEAQ 208
Query: 281 VTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSD 340
S+ D + +P P +W F D P +S++ +S D+ T +V T+
Sbjct: 209 SGSSAGD---AVWSGHSPPPPQENWVSFADTPPTSTLLTMHPASVQDQTTVRTVASATTA 265
Query: 341 ITQARVKS 348
I R S
Sbjct: 266 IEIRRQSS 273
>gi|190886437 RALBP1 associated Eps domain containing 1 isoform b
[Homo sapiens]
Length = 769
Score = 32.3 bits (72), Expect = 0.65
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 224 ISPVSSYAESETTDSVPSDEESAEGRPH-WRK--RNIEGKQYLSNMGTRGSYLLPGMASF 280
+ P +S E V S ++S PH WRK R+ G + G + P +
Sbjct: 149 VQPRTSADAQEPASPVVSPQQSPPTSPHTWRKHSRHPSGGNSERPLAGPGPFWSPFGEAQ 208
Query: 281 VTSNKPDLQVTIKEESNPVPYNSSWPPFQDLPLSSSMTPASSSSRPDRETRASVIKKTSD 340
S+ D + +P P +W F D P +S++ +S D+ T +V T+
Sbjct: 209 SGSSAGD---AVWSGHSPPPPQENWVSFADTPPTSTLLTMHPASVQDQTTVRTVASATTA 265
Query: 341 ITQARVKS 348
I R S
Sbjct: 266 IEIRRQSS 273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,727,831
Number of Sequences: 37866
Number of extensions: 711092
Number of successful extensions: 2336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2233
Number of HSP's gapped (non-prelim): 158
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.