LOC402360 17714

Name: LOC402360	Sequence: fasta or formatted (278aa)		NCBI GI: 239743692
Description: PREDICTED: hypothetical protein LOC402360		Not currently referenced in the text
Other entries for this name: alt mRNA {278aa} PREDICTED: similar to hCG1742476 alt mRNA {278aa} PREDICTED: similar to hCG1742476
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 19 3 C cysteine 1.1 3 1 D aspartate 1.8 5 1 E glutamate 9.7 27 2 F phenylalanine 3.6 10 1 G glycine 5.4 15 2 H histidine 2.9 8 1 I isoleucine 3.6 10 2 K lysine 15.8 44 5 L leucine 4.3 12 1 M methionine 1.8 5 1 N asparagine 4.7 13 1 P proline 7.2 20 2 Q glutamine 4.0 11 1 R arginine 4.7 13 2 S serine 11.2 31 3 T threonine 5.4 15 1 V valine 5.0 14 1 W tryptophan 0.0 0 0 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC402360 LOC402360 1.000 PREDICTED: similar to hCG1742476 LOC402360 1.000 PREDICTED: similar to hCG1742476 NOP56 0.566 nucleolar protein 5A LOC338756 0.268 PREDICTED: similar to Nucleolar protein 5A LOC338756 0.268 PREDICTED: similar to Nucleolar protein 5A LOC338756 0.268 PREDICTED: hypothetical protein NOP58 0.098 NOP58 ribonucleoprotein homolog MAP1B 0.051 microtubule-associated protein 1B NEFH 0.049 neurofilament, heavy polypeptide 200kDa DDX21 0.049 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 SMTNL1 0.049 smoothelin-like 1 REST 0.045 RE1-silencing transcription factor SRRM1 0.045 serine/arginine repetitive matrix 1 RSL1D1 0.040 ribosomal L1 domain containing 1 FLJ37078 0.040 hypothetical protein LOC222183 FAM133A 0.040 hypothetical protein LOC286499 RFC1 0.038 replication factor C large subunit CALD1 0.036 caldesmon 1 isoform 5 CALD1 0.036 caldesmon 1 isoform 2 PRPF4B 0.036 serine/threonine-protein kinase PRP4K LYAR 0.036 Ly1 antibody reactive homolog LYAR 0.036 Ly1 antibody reactive homolog CALD1 0.036 caldesmon 1 isoform 4 CALD1 0.036 caldesmon 1 isoform 3 SFRS18 0.036 splicing factor, arginine/serine-rich 130 SFRS18 0.036 splicing factor, arginine/serine-rich 130 CYLC2 0.034 cylicin 2 ADD2 0.034 adducin 2 isoform c ADD2 0.034 adducin 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.