Guide to the Human Genome
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Name: KIF1C Sequence: fasta or formatted (1103aa) NCBI GI: 40254834
Description:

kinesin family member 1C

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         85           2
 C cysteine            1.4         15           1
 D aspartate           4.9         54           2
 E glutamate           9.2        102           3
 F phenylalanine       2.1         23           1
 G glycine             7.4         82           3
 H histidine           1.9         21           2
 I isoleucine          3.4         37           2
 K lysine              4.7         52           2
 L leucine             8.5         94           3
 M methionine          2.5         28           2
 N asparagine          3.0         33           1
 P proline             8.1         89           4
 Q glutamine           5.3         58           3
 R arginine            8.9         98           3
 S serine              7.8         86           2
 T threonine           4.4         48           2
 V valine              5.5         61           3
 W tryptophan          1.1         12           1
 Y tyrosine            2.3         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 1C 
KIF1B                 0.596   kinesin family member 1B isoform alpha 
KIF1B                 0.442   kinesin family member 1B isoform b 
KIF1A                 0.438   axonal transport of synaptic vesicles 
KIF13A                0.245   kinesin family member 13A isoform d 
KIF13A                0.245   kinesin family member 13A isoform c 
KIF13A                0.245   kinesin family member 13A isoform b 
KIF13A                0.245   kinesin family member 13A isoform a 
KIF13B                0.234   kinesin family member 13B 
KIF16B                0.215   kinesin-like motor protein C20orf23 
KIF14                 0.194   kinesin family member 14 
STARD9                0.127   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.127   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.127   PREDICTED: StAR-related lipid transfer (START) doma...
KIF17                 0.126   kinesin family member 17 isoform b 
KIF17                 0.126   kinesin family member 17 isoform a 
KIF3B                 0.124   kinesin family member 3B 
KIF3A                 0.119   kinesin family member 3A 
KIF3C                 0.114   kinesin family member 3C 
KIF4B                 0.108   kinesin family member 4B 
KIF4A                 0.107   kinesin family member 4 
KIF18B                0.107   kinesin family member 18B 
KIF27                 0.100   kinesin family member 27 
KIF15                 0.098   kinesin family member 15 
KIF5B                 0.096   kinesin family member 5B 
KIF11                 0.094   kinesin family member 11 
KIF18A                0.092   kinesin family member 18A 
KIF5A                 0.090   kinesin family member 5A 
KIF5C                 0.090   kinesin family member 5C 
KIF19                 0.090   kinesin family member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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