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Search of human proteins with 153070262
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153070262 meprin A alpha [Homo sapiens]
(746 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153070262 meprin A alpha [Homo sapiens] 1546 0.0
gi|153070264 meprin A beta [Homo sapiens] 514 e-145
gi|157502169 astacin-like metalloendopeptidase [Homo sapiens] 122 9e-28
gi|4502421 bone morphogenetic protein 1 isoform 1 precursor [Hom... 105 2e-22
gi|5902808 bone morphogenetic protein 1 isoform 2 precursor [Hom... 105 2e-22
gi|5453579 bone morphogenetic protein 1 isoform 3 precursor [Hom... 105 2e-22
gi|6912724 tolloid-like 2 [Homo sapiens] 104 3e-22
gi|22547221 tolloid-like 1 [Homo sapiens] 103 4e-22
gi|24111244 MAM domain containing glycosylphosphatidylinositol a... 64 7e-10
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens] 59 2e-08
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens] 59 2e-08
gi|223942069 enterokinase precursor [Homo sapiens] 59 2e-08
gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Ho... 55 2e-07
gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Ho... 55 2e-07
gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Ho... 55 2e-07
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 52 2e-06
gi|223278413 MAM domain containing 2 [Homo sapiens] 52 3e-06
gi|24041035 notch 2 preproprotein [Homo sapiens] 48 4e-05
gi|46397353 Notch homolog 2 N-terminal like protein [Homo sapiens] 48 4e-05
gi|22027630 TNF receptor-associated factor 6 [Homo sapiens] 47 5e-05
gi|4759254 TNF receptor-associated factor 6 [Homo sapiens] 47 5e-05
gi|182508169 neuropilin 1 isoform a [Homo sapiens] 47 6e-05
gi|119220585 apical early endosomal glycoprotein precursor [Homo... 46 1e-04
gi|13124888 epidermal growth factor-like protein 6 precursor [Ho... 45 2e-04
gi|74136023 delta-like 1 homolog [Homo sapiens] 44 7e-04
gi|22027612 TNF receptor-associated factor 2 [Homo sapiens] 44 7e-04
gi|148886654 polydom [Homo sapiens] 44 7e-04
gi|139394621 chondroitin sulfate proteoglycan 5 (neuroglycan C) ... 43 0.001
gi|75709198 nephronectin [Homo sapiens] 42 0.002
gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens] 41 0.005
>gi|153070262 meprin A alpha [Homo sapiens]
Length = 746
Score = 1546 bits (4002), Expect = 0.0
Identities = 746/746 (100%), Positives = 746/746 (100%)
Query: 1 MAWIRSTCILFFTLLFAHIAAVPIKYLPEENVHDADFGEQKDISEINLAAGLDLFQGDIL 60
MAWIRSTCILFFTLLFAHIAAVPIKYLPEENVHDADFGEQKDISEINLAAGLDLFQGDIL
Sbjct: 1 MAWIRSTCILFFTLLFAHIAAVPIKYLPEENVHDADFGEQKDISEINLAAGLDLFQGDIL 60
Query: 61 LQKSRNGLRDPNTRWTFPIPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYI 120
LQKSRNGLRDPNTRWTFPIPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYI
Sbjct: 61 LQKSRNGLRDPNTRWTFPIPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYI 120
Query: 121 IFQQFDGCWSEVGDQHVGQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWW 180
IFQQFDGCWSEVGDQHVGQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWW
Sbjct: 121 IFQQFDGCWSEVGDQHVGQNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWW 180
Query: 181 DQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIG 240
DQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIG
Sbjct: 181 DQILSGYQHNFDTYDDSLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSIIG 240
Query: 241 QRLDFSAIDLERLNRMYNCTTTHTLLDHCTFEKANICGMIQGTRDDTDWAHQDSAQAGEV 300
QRLDFSAIDLERLNRMYNCTTTHTLLDHCTFEKANICGMIQGTRDDTDWAHQDSAQAGEV
Sbjct: 241 QRLDFSAIDLERLNRMYNCTTTHTLLDHCTFEKANICGMIQGTRDDTDWAHQDSAQAGEV 300
Query: 301 DHTLLGQCTGAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVV 360
DHTLLGQCTGAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVV
Sbjct: 301 DHTLLGQCTGAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVV 360
Query: 361 WVRRDDSTGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIY 420
WVRRDDSTGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIY
Sbjct: 361 WVRRDDSTGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIY 420
Query: 421 LDDITLTETPCPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSG 480
LDDITLTETPCPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSG
Sbjct: 421 LDDITLTETPCPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSG 480
Query: 481 YLRLAFHVCSGENDAILEWPVENRQVIITILDQEPDVRNRMSSSMVFTTSKSHTSPAIND 540
YLRLAFHVCSGENDAILEWPVENRQVIITILDQEPDVRNRMSSSMVFTTSKSHTSPAIND
Sbjct: 481 YLRLAFHVCSGENDAILEWPVENRQVIITILDQEPDVRNRMSSSMVFTTSKSHTSPAIND 540
Query: 541 TVIWDRPSRVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLIIFVDFEDITHLS 600
TVIWDRPSRVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLIIFVDFEDITHLS
Sbjct: 541 TVIWDRPSRVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLIIFVDFEDITHLS 600
Query: 601 QTEVPTKGKRLSPQGLILQGQEQQVSEEGSGKAMLEEALPVSLSQGQPSRQKRSVENTGP 660
QTEVPTKGKRLSPQGLILQGQEQQVSEEGSGKAMLEEALPVSLSQGQPSRQKRSVENTGP
Sbjct: 601 QTEVPTKGKRLSPQGLILQGQEQQVSEEGSGKAMLEEALPVSLSQGQPSRQKRSVENTGP 660
Query: 661 LEDHNWPQYFRDPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLG 720
LEDHNWPQYFRDPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLG
Sbjct: 661 LEDHNWPQYFRDPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLG 720
Query: 721 MVIGGTAGVIFLTFSIIAILSQRPRK 746
MVIGGTAGVIFLTFSIIAILSQRPRK
Sbjct: 721 MVIGGTAGVIFLTFSIIAILSQRPRK 746
>gi|153070264 meprin A beta [Homo sapiens]
Length = 701
Score = 514 bits (1324), Expect = e-145
Identities = 266/578 (46%), Positives = 367/578 (63%), Gaps = 16/578 (2%)
Query: 34 DADFGEQKDISEINLAAGLDLFQGDILLQKS--RNGLRDPNTRWTFPIPYILADNLGLNA 91
D D G +DI +IN GLDLF+GDI L ++ RN + RW IPY+L D+L +NA
Sbjct: 28 DVDGGMDQDIFDINEGLGLDLFEGDIRLDRAQIRNSIIGEKYRWPHTIPYVLEDSLEMNA 87
Query: 92 KGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFDGCWSEVGDQHVG-QNISIGQGCAYK 150
KG IL AFE +RLK+C+DFKP+ GE++YI + GCWS VG++ VG Q +SIG C
Sbjct: 88 KGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRI 147
Query: 151 AIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDDSLITDLNTPYDYES 210
A ++HE LHALGF+HEQSR+DRDDYV I WD+ILSG +HNF+TY D + LN PYDY S
Sbjct: 148 ATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTS 207
Query: 211 LMHYQPFSFNKNASVPTITAKIPEFNSIIGQRLDFSAIDLERLNRMYNCTTTHTLLDHCT 270
+MHY +F +N + PTI +I +F +IGQR+DFS DL +LN++YNC+++ + +D C+
Sbjct: 208 VMHYSKTAF-QNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSSLSFMDSCS 266
Query: 271 FEKANICGMIQGTRDDTDWAHQDSAQAG-EVDHTLLGQCTGAGYFMQFSTSSGSAEEAAL 329
FE N+CGMIQ + D+ DW G E DH+ +GQC G+G+FM F +SS + A+
Sbjct: 267 FELENVCGMIQSSGDNADWQRVSQVPRGPESDHSNMGQCQGSGFFMHFDSSSVNVGATAV 326
Query: 330 LESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGDDDHNWK 389
LESR LYPKR QCLQF+ +GS SD+L +++R + L V+ + +W+
Sbjct: 327 LESRTLYPKRGFQCLQFYLYNSGSESDQLNIYIREYSADNVDGNLTLVEEIKEIPTGSWQ 386
Query: 390 IAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPCPTGVWTVRNFSQVLENTS 449
+ HV LK +KFR +F+G KG S GG+ +DDI L+ET CP +W +RNF+Q + S
Sbjct: 387 LYHVTLKVTKKFRVVFEGRKGSGA-SLGGLSIDDINLSETRCPHHIWHIRNFTQFI--GS 443
Query: 450 KGDKLQSPRFYNSEGYGFGVTLYPNSRESSGYLRLAFHVCSGENDAILEWPVENRQVIIT 509
L SP FY+S+GY F + L ++G + FH+ SG ND L+WP +Q +T
Sbjct: 444 PNGTLYSPPFYSSKGYAFQIYLNLAHVTNAG---IYFHLISGANDDQLQWPCPWQQATMT 500
Query: 510 ILDQEPDVRNRMSSSMVFTTSKSHTSPAINDTVIWDRPSRVGT---YHTDCNCFRSIDLG 566
+LDQ PD+R RMS+ TT T+ N WDRPS+VGT + R G
Sbjct: 501 LLDQNPDIRQRMSNQRSITTDPFMTTD--NGNYFWDRPSKVGTVALFSNGTQFRRGGGYG 558
Query: 567 WSGFISHQMLKRRSFLKNDDLIIFVDFEDITHLSQTEV 604
S FI+H+ LK R F+K DD+ I + EDI+HL+ T++
Sbjct: 559 TSAFITHERLKSRDFIKGDDVYILLTVEDISHLNSTQI 596
>gi|157502169 astacin-like metalloendopeptidase [Homo sapiens]
Length = 431
Score = 122 bits (307), Expect = 9e-28
Identities = 77/236 (32%), Positives = 121/236 (51%), Gaps = 22/236 (9%)
Query: 41 KDISEINLAAGLD-------LFQGDILLQKSRNGLRDPNTRWTF------PIPYILADNL 87
KDI IN L+ L +GDI+ L + +W +P++L+
Sbjct: 53 KDIPAINQGLILEETPESSFLIEGDIIRPSPFRLLSATSNKWPMGGSGVVEVPFLLSSKY 112
Query: 88 GLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFDGCWSEVGDQHVGQNISIGQGC 147
++ IL A F +C+ F Y+ + +I GC+S VG Q +S+ C
Sbjct: 113 DEPSRQVILEALAEFERSTCIRFVTYQDQRDFISIIPMYGCFSSVGRSGGMQVVSLAPTC 172
Query: 148 AYKA--IIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDDSLITDLNTP 205
K I+ HE++H LGF+HE +R DRD Y+ + W++IL G++ NF S ++ TP
Sbjct: 173 LQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSS---NMLTP 229
Query: 206 YDYESLMHYQPFSFNKNASVPTITAK-IPEFNSIIGQRLDFSAIDLERLNRMYNCT 260
YDY S+MHY +F++ +PTIT P + IGQR + SA D+ R+ ++Y C+
Sbjct: 230 YDYSSVMHYGRLAFSRR-GLPTITPLWAPSVH--IGQRWNLSASDITRVLKLYGCS 282
>gi|4502421 bone morphogenetic protein 1 isoform 1 precursor [Homo
sapiens]
Length = 730
Score = 105 bits (262), Expect = 2e-22
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 79 IPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFD-GCWSEVGDQHV 137
IP+++ N + + A + +CV F E SYI+F GC S VG +
Sbjct: 135 IPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGCCSYVGRRGG 194
Query: 138 G-QNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDD 196
G Q ISIG+ C I+ HE+ H +GF+HE +R DRD +V+I + I G ++NF +
Sbjct: 195 GPQAISIGKNCDKFGIVVHELGHVVGFWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEP 254
Query: 197 SLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSI---IGQRLDFSAIDLERL 253
+ L YD++S+MHY +F++ + TI K E N + IGQR S D+ +
Sbjct: 255 QEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKY-EVNGVKPPIGQRTRLSKGDIAQA 313
Query: 254 NRMYNCTTTHTLLDHCT 270
++Y C L T
Sbjct: 314 RKLYKCPACGETLQDST 330
>gi|5902808 bone morphogenetic protein 1 isoform 2 precursor [Homo
sapiens]
Length = 823
Score = 105 bits (262), Expect = 2e-22
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 79 IPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFD-GCWSEVGDQHV 137
IP+++ N + + A + +CV F E SYI+F GC S VG +
Sbjct: 135 IPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGCCSYVGRRGG 194
Query: 138 G-QNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDD 196
G Q ISIG+ C I+ HE+ H +GF+HE +R DRD +V+I + I G ++NF +
Sbjct: 195 GPQAISIGKNCDKFGIVVHELGHVVGFWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEP 254
Query: 197 SLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSI---IGQRLDFSAIDLERL 253
+ L YD++S+MHY +F++ + TI K E N + IGQR S D+ +
Sbjct: 255 QEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKY-EVNGVKPPIGQRTRLSKGDIAQA 313
Query: 254 NRMYNCTTTHTLLDHCT 270
++Y C L T
Sbjct: 314 RKLYKCPACGETLQDST 330
>gi|5453579 bone morphogenetic protein 1 isoform 3 precursor [Homo
sapiens]
Length = 986
Score = 105 bits (262), Expect = 2e-22
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 79 IPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFD-GCWSEVGDQHV 137
IP+++ N + + A + +CV F E SYI+F GC S VG +
Sbjct: 135 IPFVIGGNFTGSQRAVFRQAMRHWEKHTCVTFLERTDEDSYIVFTYRPCGCCSYVGRRGG 194
Query: 138 G-QNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDD 196
G Q ISIG+ C I+ HE+ H +GF+HE +R DRD +V+I + I G ++NF +
Sbjct: 195 GPQAISIGKNCDKFGIVVHELGHVVGFWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEP 254
Query: 197 SLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPEFNSI---IGQRLDFSAIDLERL 253
+ L YD++S+MHY +F++ + TI K E N + IGQR S D+ +
Sbjct: 255 QEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKY-EVNGVKPPIGQRTRLSKGDIAQA 313
Query: 254 NRMYNCTTTHTLLDHCT 270
++Y C L T
Sbjct: 314 RKLYKCPACGETLQDST 330
>gi|6912724 tolloid-like 2 [Homo sapiens]
Length = 1015
Score = 104 bits (260), Expect = 3e-22
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 79 IPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQ-QFDGCWSEVGDQHV 137
IPY++ N + + A + +CV F E S+I+F + GC S VG +
Sbjct: 164 IPYVIGGNFTGSQRAIFKQAMRHWEKHTCVTFIERTDEESFIVFSYRTCGCCSYVGRRGG 223
Query: 138 G-QNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDD 196
G Q ISIG+ C I+ HE+ H +GF+HE +R DRD +V I + I G ++NF +
Sbjct: 224 GPQAISIGKNCDKFGIVAHELGHVVGFWHEHTRPDRDQHVTIIRENIQPGQEYNFLKMEA 283
Query: 197 SLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPE--FNSIIGQRLDFSAIDLERLN 254
++ L YD++S+MHY +F++ + TI + + IGQR+ S D+ +
Sbjct: 284 GEVSSLGETYDFDSIMHYARNTFSRGVFLDTILPRQDDNGVRPTIGQRVRLSQGDIAQAR 343
Query: 255 RMYNCTTTHTLLDHCT 270
++Y C L T
Sbjct: 344 KLYKCPACGETLQDTT 359
>gi|22547221 tolloid-like 1 [Homo sapiens]
Length = 1013
Score = 103 bits (258), Expect = 4e-22
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 79 IPYILADNLGLNAKGAILYAFEMFRLKSCVDFKPYEGESSYIIFQQFD-GCWSEVGDQHV 137
IPY++ N + + A + +CV F E SYI+F GC S VG +
Sbjct: 162 IPYVIGGNFTGSQRAMFKQAMRHWEKHTCVTFIERSDEESYIVFTYRPCGCCSYVGRRGN 221
Query: 138 G-QNISIGQGCAYKAIIEHEILHALGFYHEQSRTDRDDYVNIWWDQILSGYQHNFDTYDD 196
G Q ISIG+ C I+ HE+ H +GF+HE +R DRD++V I + I G ++NF +
Sbjct: 222 GPQAISIGKNCDKFGIVVHELGHVIGFWHEHTRPDRDNHVTIIRENIQPGQEYNFLKMEP 281
Query: 197 SLITDLNTPYDYESLMHYQPFSFNKNASVPTITAKIPE--FNSIIGQRLDFSAIDLERLN 254
+ L YD++S+MHY +F++ + TI + IGQR S D+ +
Sbjct: 282 GEVNSLGERYDFDSIMHYARNTFSRGMFLDTILPSRDDNGIRPAIGQRTRLSKGDIAQAR 341
Query: 255 RMYNC 259
++Y C
Sbjct: 342 KLYRC 346
>gi|24111244 MAM domain containing glycosylphosphatidylinositol
anchor 1 [Homo sapiens]
Length = 955
Score = 63.5 bits (153), Expect = 7e-10
Identities = 49/170 (28%), Positives = 69/170 (40%), Gaps = 11/170 (6%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQDSAQAGEVDHTLLG-----QCTGAGYFMQFSTS-SG 322
C FE ICG Q D+ DW Q++ G T GY+M TS
Sbjct: 753 CHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSRPR 812
Query: 323 SAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQG 382
+ A L S + K C+ FFY M G L + VR S + G
Sbjct: 813 ELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVR---SRNKGALDTHAWSLSG 869
Query: 383 DDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPCP 432
+ + W+ AHV + F+ +F+G +G G I +DD+TL + CP
Sbjct: 870 NKGNVWQQAHVPISPSGPFQIIFEGVRG--PGYLGDIAIDDVTLKKGECP 917
>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
Length = 956
Score = 58.9 bits (141), Expect = 2e-08
Identities = 50/178 (28%), Positives = 69/178 (38%), Gaps = 19/178 (10%)
Query: 268 HCTFEKANICGMIQGTRDDTDWAHQDSAQAGEVDHTLLG-----QCTGAGYFMQFSTSSG 322
HC FE NIC Q D+ DW Q +A G + G++M TS
Sbjct: 747 HCGFEDGNICLFTQDDTDNFDWTKQSTATRNTKYTPNTGPNADRSGSKEGFYMYIETSRP 806
Query: 323 SAE-EAALLESRILY--------PKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRK 373
E E A L S + P C FFY M G L V++R T
Sbjct: 807 RLEGEKARLLSPVFSIAPKNPYGPTNTAYCFSFFYHMYGQHIGVLNVYLRLKGQTTIENP 866
Query: 374 LVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
L + G+ W AHV + F+ +F+G +G G I +DD+++ E C
Sbjct: 867 L---WSSSGNKGQRWNEAHVNIYPITSFQLIFEGIRG--PGIEGDIAIDDVSIAEGEC 919
>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
Length = 727
Score = 58.9 bits (141), Expect = 2e-08
Identities = 50/178 (28%), Positives = 69/178 (38%), Gaps = 19/178 (10%)
Query: 268 HCTFEKANICGMIQGTRDDTDWAHQDSAQAGEVDHTLLG-----QCTGAGYFMQFSTSSG 322
HC FE NIC Q D+ DW Q +A G + G++M TS
Sbjct: 518 HCGFEDGNICLFTQDDTDNFDWTKQSTATRNTKYTPNTGPNADRSGSKEGFYMYIETSRP 577
Query: 323 SAE-EAALLESRILY--------PKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRK 373
E E A L S + P C FFY M G L V++R T
Sbjct: 578 RLEGEKARLLSPVFSIAPKNPYGPTNTAYCFSFFYHMYGQHIGVLNVYLRLKGQTTIENP 637
Query: 374 LVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
L + G+ W AHV + F+ +F+G +G G I +DD+++ E C
Sbjct: 638 L---WSSSGNKGQRWNEAHVNIYPITSFQLIFEGIRG--PGIEGDIAIDDVSIAEGEC 690
>gi|223942069 enterokinase precursor [Homo sapiens]
Length = 1019
Score = 58.5 bits (140), Expect = 2e-08
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 268 HCTFEKANICGMIQGTRDDTDWAHQDSAQAG-----EVDHTLLGQCTGAGYFMQFSTSSG 322
+C FE C +Q DD +W + DHT +G+++ T G
Sbjct: 346 NCNFEDG-FCFWVQDLNDDNEWERIQGSTFSPFTGPNFDHTF---GNASGFYISTPTGPG 401
Query: 323 SAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQG 382
+E L S L P + CL F+Y M G +L + + D N+ K V + +G
Sbjct: 402 GRQERVGLLSLPLDPTLEPACLSFWYHMYGENVHKLSINISNDQ---NMEKTVFQK--EG 456
Query: 383 DDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
+ NW V L E KF+ F K I LDDI+LT C
Sbjct: 457 NYGDNWNYGQVTLNETVKFKVAFNAFK---NKILSDIALDDISLTYGIC 502
>gi|239755250 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1542
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQCTGAGYFMQFSTSSGSA 324
C FE IC Q +DD DW + G + LG G +++ S
Sbjct: 230 CNFE-TGICNWEQDAKDDFDWTRNQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQ 288
Query: 325 EEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVR-RDDSTGNVRKLVKVQTFQGD 383
+ AALL + K +F+Y M G RL ++ R DS G + + G+
Sbjct: 289 DSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQL-----LWQIFGN 343
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
+ W H+ + Q F+ L + + GD TG I +DD++ +
Sbjct: 344 QGNRWIRKHLNISSRQPFQILVEASVGD--GFTGDIAIDDLSFMD 386
Score = 43.5 bits (101), Expect = 7e-04
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 34/255 (13%)
Query: 265 LLDHCTFEKANICGMIQ---------------GTRDDTDWAHQDSAQAGEVDHTLLGQCT 309
+++ C+FEK ++C Q G + H + VDHT Q T
Sbjct: 451 VMEVCSFEKRSLCKWYQPIPVHLLQDSNTFRWGLGNGISIHHGEENHRPSVDHT---QNT 507
Query: 310 GAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTG 369
G+++ +S+G + A + + I+ + L F+ M G+ L V +++D+ T
Sbjct: 508 TDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDNVTS 567
Query: 370 NVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTET 429
K+ G WK A V L + +F+ +G + G + +DDI+ +
Sbjct: 568 ------KLWAQTGQQGAQWKRAEVFLGIRSHTQIVFRAKRG--ISYIGDVAVDDISFQDC 619
Query: 430 P---CPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSGYLRLAF 486
P T F ++ DKL F N T + R SSG F
Sbjct: 620 SPLLSPERKCTDHEFMCANKHCIAKDKLCD--FVNDCADNSDETTF-ICRTSSGRCDFEF 676
Query: 487 HVCS--GENDAILEW 499
+CS E D +W
Sbjct: 677 DLCSWKQEKDEDFDW 691
Score = 42.7 bits (99), Expect = 0.001
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQDSA--QAGE---VDHTLLGQCTGAGYFMQFSTSSGS 323
C FE ++C Q +D DW + S+ AG DHTL G +G F+ S
Sbjct: 672 CDFE-FDLCSWKQEKDEDFDWNLKASSIPAAGTEPAADHTL-GNSSGHYIFIN-SLFPQQ 728
Query: 324 AEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGD 383
AA + S ++ + K + F Y M G+ L + + T + L+ + QG+
Sbjct: 729 PMRAARISSPVISKRSKNCKIIFHYHMYGNGIGALTLM--QVSVTNQTKVLLNLTVEQGN 786
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
W+ + L ++ F+ F+G G Q G I LDDI LTE
Sbjct: 787 F---WRREELSLFGDEDFQLKFEGRVGKGQR--GDIALDDIVLTE 826
Score = 38.5 bits (88), Expect = 0.023
Identities = 46/187 (24%), Positives = 69/187 (36%), Gaps = 21/187 (11%)
Query: 258 NCTTTHTLLDHCTFEKAN-----ICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQC 308
+C + C FE ++ C + Q + DD DWA A + DHT
Sbjct: 1153 HCAHYTSTTGSCNFETSSGNWTTACSLTQDSEDDLDWAIGSRIPAKALIPDSDHT----- 1207
Query: 309 TGAGYFMQFSTSSGSAE-EAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDS 367
G+G + SSGS E A + + +P C F+ P ++ V +
Sbjct: 1208 PGSGQHFLYVNSSGSKEGSVARITTSKSFPASLGMCTVRFWFYMIDPRSMGILKVYTIEE 1267
Query: 368 TGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLT 427
+G + V + G+ W V L F+ F+ N I LDDI+ T
Sbjct: 1268 SG---LNILVWSVIGNKRTGWTYGSVPLSSNSPFKVAFEADLDG--NEDIFIALDDISFT 1322
Query: 428 ETPCPTG 434
C TG
Sbjct: 1323 -PECVTG 1328
>gi|239749752 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQCTGAGYFMQFSTSSGSA 324
C FE IC Q +DD DW + G + LG G +++ S
Sbjct: 505 CNFE-TGICNWEQDAKDDFDWTRNQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQ 563
Query: 325 EEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVR-RDDSTGNVRKLVKVQTFQGD 383
+ AALL + K +F+Y M G RL ++ R DS G + + G+
Sbjct: 564 DSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQL-----LWQIFGN 618
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
+ W H+ + Q F+ L + + GD TG I +DD++ +
Sbjct: 619 QGNRWIRKHLNISSRQPFQILVEASVGD--GFTGDIAIDDLSFMD 661
Score = 43.5 bits (101), Expect = 7e-04
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 34/255 (13%)
Query: 265 LLDHCTFEKANICGMIQ---------------GTRDDTDWAHQDSAQAGEVDHTLLGQCT 309
+++ C+FEK ++C Q G + H + VDHT Q T
Sbjct: 726 VMEVCSFEKRSLCKWYQPIPVHLLQDSNTFRWGLGNGISIHHGEENHRPSVDHT---QNT 782
Query: 310 GAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTG 369
G+++ +S+G + A + + I+ + L F+ M G+ L V +++D+ T
Sbjct: 783 TDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDNVTS 842
Query: 370 NVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTET 429
K+ G WK A V L + +F+ +G + G + +DDI+ +
Sbjct: 843 ------KLWAQTGQQGAQWKRAEVFLGIRSHTQIVFRAKRG--ISYIGDVAVDDISFQDC 894
Query: 430 P---CPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSGYLRLAF 486
P T F ++ DKL F N T + R SSG F
Sbjct: 895 SPLLSPERKCTDHEFMCANKHCIAKDKLCD--FVNDCADNSDETTF-ICRTSSGRCDFEF 951
Query: 487 HVCS--GENDAILEW 499
+CS E D +W
Sbjct: 952 DLCSWKQEKDEDFDW 966
Score = 43.1 bits (100), Expect = 0.001
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQDSA--QAGE---VDHTLLGQCTGAGYFMQFSTSSGS 323
C FE ++C Q +D DW + S+ AG DHTL G +G F++ S
Sbjct: 947 CDFE-FDLCSWKQEKDEDFDWNLKASSIPAAGTEPAADHTL-GNSSGHYIFIK-SLFPQQ 1003
Query: 324 AEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGD 383
AA + S ++ + K + F Y M G+ L + + T + L+ + QG+
Sbjct: 1004 PMRAARISSPVISKRSKNCKIIFHYHMYGNGIGALTLM--QVSVTNQTKVLLNLTVEQGN 1061
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
W+ + L ++ F+ F+G G Q G I LDDI LTE
Sbjct: 1062 F---WRREELSLFGDEDFQLKFEGRVGKGQR--GDIALDDIVLTE 1101
Score = 38.5 bits (88), Expect = 0.023
Identities = 46/187 (24%), Positives = 69/187 (36%), Gaps = 21/187 (11%)
Query: 258 NCTTTHTLLDHCTFEKAN-----ICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQC 308
+C + C FE ++ C + Q + DD DWA A + DHT
Sbjct: 1428 HCAHYTSTTGSCNFETSSGNWTTACSLTQDSEDDLDWAIGSRIPAKALIPDSDHT----- 1482
Query: 309 TGAGYFMQFSTSSGSAE-EAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDS 367
G+G + SSGS E A + + +P C F+ P ++ V +
Sbjct: 1483 PGSGQHFLYVNSSGSKEGSVARITTSKSFPASLGMCTVRFWFYMIDPRSMGILKVYTIEE 1542
Query: 368 TGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLT 427
+G + V + G+ W V L F+ F+ N I LDDI+ T
Sbjct: 1543 SG---LNILVWSVIGNKRTGWTYGSVPLSSNSPFKVAFEADLDG--NEDIFIALDDISFT 1597
Query: 428 ETPCPTG 434
C TG
Sbjct: 1598 -PECVTG 1603
>gi|239744011 PREDICTED: chromosome 10 open reading frame 112 [Homo
sapiens]
Length = 1817
Score = 55.1 bits (131), Expect = 2e-07
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQCTGAGYFMQFSTSSGSA 324
C FE IC Q +DD DW + G + LG G +++ S
Sbjct: 505 CNFE-TGICNWEQDAKDDFDWTRSQGPTPTLNTGPMKDNTLGTAKGHYLYIESSEPQAFQ 563
Query: 325 EEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVR-RDDSTGNVRKLVKVQTFQGD 383
+ AALL + K +F+Y M G RL ++ R DS G + + G+
Sbjct: 564 DSAALLSPILNATDTKGCTFRFYYHMFGKRIYRLAIYQRIWSDSRGQL-----LWQIFGN 618
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
+ W H+ + Q F+ L + + GD TG I +DD++ +
Sbjct: 619 QGNRWIRKHLNISSRQPFQILVEASVGD--GFTGDIAIDDLSFMD 661
Score = 43.5 bits (101), Expect = 7e-04
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 34/255 (13%)
Query: 265 LLDHCTFEKANICGMIQ---------------GTRDDTDWAHQDSAQAGEVDHTLLGQCT 309
+++ C+FEK ++C Q G + H + VDHT Q T
Sbjct: 726 VMEVCSFEKRSLCKWYQPIPVHLLQDSNTFRWGLGNGISIHHGEENHRPSVDHT---QNT 782
Query: 310 GAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTG 369
G+++ +S+G + A + + I+ + L F+ M G+ L V +++D+ T
Sbjct: 783 TDGWYLYADSSNGKFGDTADILTPIISLTGPKCTLVFWTHMNGATVGSLQVLIKKDNVTS 842
Query: 370 NVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTET 429
K+ G WK A V L + +F+ +G + G + +DDI+ +
Sbjct: 843 ------KLWAQTGQQGAQWKRAEVFLGIRSHTQIVFRAKRG--ISYIGDVAVDDISFQDC 894
Query: 430 P---CPTGVWTVRNFSQVLENTSKGDKLQSPRFYNSEGYGFGVTLYPNSRESSGYLRLAF 486
P T F ++ DKL F N T + R SSG F
Sbjct: 895 SPLLSPERKCTDHEFMCANKHCIAKDKLCD--FVNDCADNSDETTF-ICRTSSGRCDFEF 951
Query: 487 HVCS--GENDAILEW 499
+CS E D +W
Sbjct: 952 DLCSWKQEKDEDFDW 966
Score = 43.1 bits (100), Expect = 0.001
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQDSA--QAGE---VDHTLLGQCTGAGYFMQFSTSSGS 323
C FE ++C Q +D DW + S+ AG DHTL G +G F++ S
Sbjct: 947 CDFE-FDLCSWKQEKDEDFDWNLKASSIPAAGTEPAADHTL-GNSSGHYIFIK-SLFPQQ 1003
Query: 324 AEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGD 383
AA + S ++ + K + F Y M G+ L + + T + L+ + QG+
Sbjct: 1004 PMRAARISSPVISKRSKNCKIIFHYHMYGNGIGALTLM--QVSVTNQTKVLLNLTVEQGN 1061
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTE 428
W+ + L ++ F+ F+G G Q G I LDDI LTE
Sbjct: 1062 F---WRREELSLFGDEDFQLKFEGRVGKGQR--GDIALDDIVLTE 1101
Score = 38.5 bits (88), Expect = 0.023
Identities = 46/187 (24%), Positives = 69/187 (36%), Gaps = 21/187 (11%)
Query: 258 NCTTTHTLLDHCTFEKAN-----ICGMIQGTRDDTDWAHQD----SAQAGEVDHTLLGQC 308
+C + C FE ++ C + Q + DD DWA A + DHT
Sbjct: 1428 HCAHYTSTTGSCNFETSSGNWTTACSLTQDSEDDLDWAIGSRIPAKALIPDSDHT----- 1482
Query: 309 TGAGYFMQFSTSSGSAE-EAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDS 367
G+G + SSGS E A + + +P C F+ P ++ V +
Sbjct: 1483 PGSGQHFLYVNSSGSKEGSVARITTSKSFPASLGMCTVRFWFYMIDPRSMGILKVYTIEE 1542
Query: 368 TGNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLT 427
+G + V + G+ W V L F+ F+ N I LDDI+ T
Sbjct: 1543 SG---LNILVWSVIGNKRTGWTYGSVPLSSNSPFKVAFEADLDG--NEDIFIALDDISFT 1597
Query: 428 ETPCPTG 434
C TG
Sbjct: 1598 -PECVTG 1603
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 52.4 bits (124), Expect = 2e-06
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 435 VWTVRNFSQVLENTSKGDKLQ--SPRFYNSE-GYGFGVTLYPNSRESSG--YLRLAFHVC 489
+W + ++ + L+ L+ SP FY + GY V+ + N S +L L V
Sbjct: 311 IWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVL 370
Query: 490 SGENDAILEWPVENRQVIITILDQ-EPDVRNRMSSSMVFTTSKSHTSPAINDTVIWDRPS 548
G D +LEWP R+V ++LDQ +P + H + + W
Sbjct: 371 PGAFDNLLEWPFA-RRVTFSLLDQSDPGL-----------AKPQHVTETFHPDPNWKNFQ 418
Query: 549 RVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLII 589
+ GT+ + S+ G+ FISHQ +++R+++++D + I
Sbjct: 419 KPGTWRGSLD-ESSLGFGYPKFISHQDIRKRNYVRDDAVFI 458
>gi|223278413 MAM domain containing 2 [Homo sapiens]
Length = 686
Score = 51.6 bits (122), Expect = 3e-06
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQ-----DSAQAGEVDHTLLGQCTGAGYFMQFSTSSGS 323
CTFE+ C Q R+ + W + S + DHT TG GY+M S
Sbjct: 509 CTFEQDE-CTFTQEKRNRSSWHRRRGETPTSYTGPKGDHT-----TGVGYYMYIEASHMV 562
Query: 324 AEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGD 383
+ A L SR L + CL FFY M G + L V++++++ + + + +G+
Sbjct: 563 YGQKARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDS----EESLLWRRRGE 618
Query: 384 DDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
+W A + E++ + +F+ +G S I +DD+ PC
Sbjct: 619 QSISWLRALIEYSCERQHQIIFEAIRGVSIRS--DIAIDDVKFQAGPC 664
Score = 30.0 bits (66), Expect = 8.2
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 25/173 (14%)
Query: 269 CTFEKANICGMIQGTRDDTDW-----AHQDSAQAGEVDHTLLGQCTGAGYFMQF-STSSG 322
C FE+ ++CG + + +W + ++ DHT + G++M S
Sbjct: 170 CDFEENHLCGFVNRWNPNVNWFVGGGSIRNVHSILPQDHTFKSE---LGHYMYVDSVYVK 226
Query: 323 SAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQG 382
+E A L S L CL F+Y++ + ++ R D G ++ K
Sbjct: 227 HFQEVAQLISP-LTTAPMAGCLSFYYQIQQGNDNVFSLYTR--DVAGLYEEIWKADR--- 280
Query: 383 DDDHNWKIAHVVLKE----EQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
+ W +A V E F F G KG G + LDDI+ + C
Sbjct: 281 PGNAAWNLAEVEFSAPYPMEVIFEVAFNGPKG------GYVALDDISFSPVHC 327
>gi|24041035 notch 2 preproprotein [Homo sapiens]
Length = 2471
Score = 47.8 bits (112), Expect = 4e-05
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 671 RDPCDPNPCQNDGICV--NVKGMASCRCISGHAFFYTGERCQAVQVH 715
RDPC+ N CQN G CV + G A+CRC SG +TGE CQ H
Sbjct: 65 RDPCEKNRCQNGGTCVAQAMLGKATCRCASG----FTGEDCQYSTSH 107
Score = 40.0 bits (92), Expect = 0.008
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C NPCQN G C++ SC C+ G +TG++CQ
Sbjct: 913 DDCLANPCQNGGSCMDGVNTFSCLCLPG----FTGDKCQ 947
Score = 38.5 bits (88), Expect = 0.023
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 674 CD-PNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLGMVIGGT 726
CD P CQ+ G C+N+ G C+C G +TG+ C ++ V + V GGT
Sbjct: 186 CDIPGHCQHGGTCLNLPGSYQCQCPQG----FTGQYCDSLYVPCAPSPCVNGGT 235
Score = 37.7 bits (86), Expect = 0.039
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C +PC N C V SC+C++G +TG++C+
Sbjct: 146 DACLSHPCANGSTCTTVANQFSCKCLTG----FTGQKCE 180
Score = 37.4 bits (85), Expect = 0.051
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 677 NPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
NPC++ G CVN G C C+ G Y G RC+
Sbjct: 425 NPCEHAGKCVNTDGAFHCECLKG----YAGPRCE 454
Score = 37.0 bits (84), Expect = 0.067
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAV 712
C +PC N+G CV+ G C C G YTG+ CQ +
Sbjct: 1029 CSSHPCLNEGTCVDGLGTYRCSCPLG----YTGKNCQTL 1063
Score = 35.4 bits (80), Expect = 0.19
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAV 712
D C NPC N G C + +C C+ YTG+ CQ V
Sbjct: 797 DECASNPCLNQGTCFDDISGYTCHCV----LPYTGKNCQTV 833
Score = 34.7 bits (78), Expect = 0.33
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 672 DPC--DPNPCQNDGICVNVKGMASCRCISGHAFFYTGERC 709
D C PN CQN G C N G C C++G ++G+ C
Sbjct: 300 DECLLQPNACQNGGTCANRNGGYGCVCVNG----WSGDDC 335
Score = 34.3 bits (77), Expect = 0.43
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFY 704
C +PC+N G CV K + C C SG A Y
Sbjct: 1067 CSRSPCKNKGTCVQKKAESQCLCPSGWAGAY 1097
Score = 33.9 bits (76), Expect = 0.57
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 673 PCDPNPCQNDGICVNVKGMAS--CRCISGHAFFYTGERC 709
PC PNPC+N +C S C C G + G+RC
Sbjct: 836 PCSPNPCENAAVCKESPNFESYTCLCAPG----WQGQRC 870
Score = 33.9 bits (76), Expect = 0.57
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C PC N G+C N +G C C G ++G C+
Sbjct: 875 DECISKPCMNHGLCHNTQGSYMCECPPG----FSGMDCE 909
Score = 33.5 bits (75), Expect = 0.74
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 672 DPCDPNP-CQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C P C N G C++ G SCRC+ G + GERC+
Sbjct: 1227 DDCARGPHCLNGGQCMDRIGGYSCRCLPG----FAGERCE 1262
Score = 32.7 bits (73), Expect = 1.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 671 RDPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
++ C NPCQN G C N+ C C G + G CQ
Sbjct: 758 KNECLSNPCQNGGTCDNLVNGYRCTCKKG----FKGYNCQ 793
Score = 32.7 bits (73), Expect = 1.3
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C NPCQ+ C + G C C+ G Y G C+
Sbjct: 1151 DECASNPCQHGATCSDFIGGYRCECVPG----YQGVNCE 1185
Score = 32.7 bits (73), Expect = 1.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 668 QYFRDPCDPNPCQNDGICVNVKGMASCRCISG 699
+Y D C PCQN G C+++ C C G
Sbjct: 1185 EYEVDECQNQPCQNGGTCIDLVNHFKCSCPPG 1216
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
C +PCQND C++ G +C C+ G + G C+
Sbjct: 460 CHSDPCQNDATCLDKIGGFTCLCMPG----FKGVHCE 492
Score = 32.3 bits (72), Expect = 1.6
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
C NPC N+G CV+ C C G +TG CQ
Sbjct: 498 CQSNPCVNNGQCVDKVNRFQCLCPPG----FTGPVCQ 530
Score = 32.0 bits (71), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 670 FRDPCDPNPCQNDGICVNVKGMAS---CRCISGHAFFYTGERCQA 711
F D C PC N G C M CRC G ++G RCQ+
Sbjct: 1304 FVDVCPQMPCLNGGTCAVASNMPDGFICRCPPG----FSGARCQS 1344
Score = 30.8 bits (68), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRC 696
D C + CQN G+CV+ +CRC
Sbjct: 262 DDCPNHRCQNGGVCVDGVNTYNCRC 286
Score = 30.8 bits (68), Expect = 4.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 12/55 (21%)
Query: 679 CQNDGICVNVKGMASCRCISGHAFFYTGER--------CQAVQVHGSVLGMVIGG 725
CQ+ G+C+N C+C G+ Y E+ CQ HG+ IGG
Sbjct: 1120 CQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQ----HGATCSDFIGG 1170
Score = 30.4 bits (67), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISG 699
D C +PC NDG C+++ C C G
Sbjct: 609 DECYSSPCLNDGRCIDLVNGYQCNCQPG 636
>gi|46397353 Notch homolog 2 N-terminal like protein [Homo sapiens]
Length = 236
Score = 47.8 bits (112), Expect = 4e-05
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 671 RDPCDPNPCQNDGICV--NVKGMASCRCISGHAFFYTGERCQAVQVH 715
RDPC+ N CQN G CV + G A+CRC SG +TGE CQ H
Sbjct: 26 RDPCEKNRCQNGGTCVAQAMLGKATCRCASG----FTGEDCQYSTSH 68
Score = 40.4 bits (93), Expect = 0.006
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 674 CD-PNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLGMVIGGT 726
CD P CQ+ G C+N+ G C+C+ G +TG+ C ++ V + V GGT
Sbjct: 147 CDIPGHCQHGGTCLNLPGSYQCQCLQG----FTGQYCDSLYVPCAPSPCVNGGT 196
Score = 37.7 bits (86), Expect = 0.039
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C +PC N C V SC+C++G +TG++C+
Sbjct: 107 DACLSHPCANGSTCTTVANQFSCKCLTG----FTGQKCE 141
>gi|22027630 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 47.4 bits (111), Expect = 5e-05
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 435 VWTVRNFSQVL--ENTSKGDKLQSPRFYNSE-GYGFGVTLY---PNSRESSGYLRLAFHV 488
+W + NF L + K + SP FY + GY + L+ P ++ + Y+ L H
Sbjct: 354 IWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHT 413
Query: 489 CSGENDAILEWPVENRQVIITILDQ-EPDVRNRMSSSMVFTTSKSHTSPAINDTVIWDRP 547
GE D+ L WP + + +TILDQ E VR M A + + + RP
Sbjct: 414 MQGEYDSHLPWPFQG-TIRLTILDQSEAPVRQNHEEIM----------DAKPELLAFQRP 462
Query: 548 SRVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLII 589
T + F G+ F+ + L++R+F+K+D L++
Sbjct: 463 ----TIPRNPKGF-----GYVTFMHLEALRQRTFIKDDTLLV 495
>gi|4759254 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 47.4 bits (111), Expect = 5e-05
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 27/162 (16%)
Query: 435 VWTVRNFSQVL--ENTSKGDKLQSPRFYNSE-GYGFGVTLY---PNSRESSGYLRLAFHV 488
+W + NF L + K + SP FY + GY + L+ P ++ + Y+ L H
Sbjct: 354 IWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHT 413
Query: 489 CSGENDAILEWPVENRQVIITILDQ-EPDVRNRMSSSMVFTTSKSHTSPAINDTVIWDRP 547
GE D+ L WP + + +TILDQ E VR M A + + + RP
Sbjct: 414 MQGEYDSHLPWPFQG-TIRLTILDQSEAPVRQNHEEIM----------DAKPELLAFQRP 462
Query: 548 SRVGTYHTDCNCFRSIDLGWSGFISHQMLKRRSFLKNDDLII 589
T + F G+ F+ + L++R+F+K+D L++
Sbjct: 463 ----TIPRNPKGF-----GYVTFMHLEALRQRTFIKDDTLLV 495
>gi|182508169 neuropilin 1 isoform a [Homo sapiens]
Length = 923
Score = 47.0 bits (110), Expect = 6e-05
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 309 TGAGYFMQFSTSSGSAEEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDST 368
TG G F+ + A L S ++Y + C+ F+Y M+GS L V +R
Sbjct: 687 TGDGNFIYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPE 746
Query: 369 GNVRKLVKVQTFQGDDDHNWKIAHVVLKEEQK-FRYLFQGTKGDPQNSTGGIYLDDITL 426
+ + QGD +WK V+L + K ++ +F+G G + + GGI +DDI++
Sbjct: 747 EYDQLVWMAIGHQGD---HWKEGRVLLHKSLKLYQVIFEGEIG--KGNLGGIAVDDISI 800
>gi|119220585 apical early endosomal glycoprotein precursor [Homo
sapiens]
Length = 1137
Score = 46.2 bits (108), Expect = 1e-04
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 269 CTFEKANICGMIQGTRDDTDWAHQDSAQAGEVDHTLLGQCTGAGYFMQFSTSSGSA-EEA 327
C FE+ + C G DT W +S + + DHT TG G+F+ + A +
Sbjct: 577 CNFER-DTCSWYPGHLSDTHWRWVES-RGPDHDHT-----TGQGHFVLLDPTDPLAWGHS 629
Query: 328 ALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGDDDHN 387
A L SR P +CL F+Y + G L + +RR+ + + G +
Sbjct: 630 AHLLSRPQVPAAPTECLSFWYHLHGPQIGTLRLAMRREGEE------THLWSRSGTQGNR 683
Query: 388 WKIAHVVLKEE----QKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
W A L + +++ LF+G + G + LDD+ + PC
Sbjct: 684 WHEAWATLSHQPGSHAQYQLLFEGLR---DGYHGTMALDDVAVRPGPC 728
Score = 38.9 bits (89), Expect = 0.018
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 267 DHCTFEKANICGMIQGTRDDTDWAHQDSAQAGEV-----DHTLLGQCTGAGYFMQFSTSS 321
++C+FE ++ CG G + W Q +A DHT T G++M TS
Sbjct: 732 NYCSFEDSD-CGFSPGGQGL--WRRQANASGHAAWGPPTDHTTE---TAQGHYMVVDTSP 785
Query: 322 GSAE--EAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQT 379
+ + A L S+ P + CL F+Y + L V++ R +V +
Sbjct: 786 DALPRGQTASLTSKEHRPLAQPACLTFWYHGSLRSPGTLRVYLEE-------RGRHQVLS 838
Query: 380 FQGDDDHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPCP 432
W++ + ++ E+ +R +F+ +S + LDD+ L + PCP
Sbjct: 839 LSAHGGLAWRLGSMDVQAERAWRVVFEAVAAGVAHSY--VALDDLLLQDGPCP 889
>gi|13124888 epidermal growth factor-like protein 6 precursor [Homo
sapiens]
Length = 553
Score = 45.1 bits (105), Expect = 2e-04
Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 41/211 (19%)
Query: 234 EFNSIIGQRLDF-SAIDLERLNRMYNCTTTHTLLDHCTFEKANICGMIQGTRDDTDWAHQ 292
EF I+ QR S ++ + LN +C+ H IC Q DD DW
Sbjct: 376 EFGLILVQRKALTSKLEHKDLNISVDCSFNH-----------GICDWKQDREDDFDWNPA 424
Query: 293 DSAQAGEVDHTLLGQCTGAGYFMQFSTSSGSAEEAALLESRILYPKRKQQ---CLQFFYK 349
D A G++M +G ++ L ++L P + Q CL F Y+
Sbjct: 425 DRDNA-------------IGFYMAVPALAGHKKDIGRL--KLLLPDLQPQSNFCLLFDYR 469
Query: 350 MTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGDDDHNWKIAHVVLKE--EQKFRYLFQG 407
+ G +L V+V+ ++ K +D WK + L + + +F+
Sbjct: 470 LAGDKVGKLRVFVKNSNNALAWEKTT-------SEDEKWKTGKIQLYQGTDATKSIIFEA 522
Query: 408 TKGDPQNSTGGIYLDDITLTETPCPTGVWTV 438
+G + TG I +D + L CP + +V
Sbjct: 523 ERG--KGKTGEIAVDGVLLVSGLCPDSLLSV 551
Score = 32.7 bits (73), Expect = 1.3
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 11/54 (20%)
Query: 656 ENTGPLEDHNWPQYFRDPCD---------PNPCQNDGICVNVKGMASCRCISGH 700
E GP + +P Y C P PCQ+ CVN G C C+SGH
Sbjct: 73 ECVGPNKCRCFPGYTGKTCSQDVNECGMKPRPCQHR--CVNTHGSYKCFCLSGH 124
>gi|74136023 delta-like 1 homolog [Homo sapiens]
Length = 383
Score = 43.5 bits (101), Expect = 7e-04
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 665 NWPQYFRDPCDPNPCQNDGICVNVKGMASCRCISG 699
N+ + + C PNPC+NDG+C ++ G CRC +G
Sbjct: 165 NFCEIVANSCTPNPCENDGVCTDIGGDFRCRCPAG 199
Score = 33.1 bits (74), Expect = 0.96
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 674 CDPNPCQNDGICVNV-KGMASCRCISGHAFFYTGERCQ 710
C PC N+G CV++ G+ C C G Y+G+ CQ
Sbjct: 92 CSSAPCANNGTCVSLDDGLYECSCAPG----YSGKDCQ 125
>gi|22027612 TNF receptor-associated factor 2 [Homo sapiens]
Length = 501
Score = 43.5 bits (101), Expect = 7e-04
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 435 VWTVRNFSQVLENTSKG--DKLQSPRFYNSE-GYGFGVTLYPNSRESSG---YLRLAFHV 488
+W + +F++ + G + SP FY S GY + +Y N + +G +L L F V
Sbjct: 355 IWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNG-DGTGRGTHLSLFFVV 413
Query: 489 CSGENDAILEWPVENRQVIITILDQ 513
G NDA+L WP N++V + +LDQ
Sbjct: 414 MKGPNDALLRWPF-NQKVTLMLLDQ 437
>gi|148886654 polydom [Homo sapiens]
Length = 3571
Score = 43.5 bits (101), Expect = 7e-04
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 672 DPCDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
D C P PC N+G+C ++ G C C SG YTG+RC+
Sbjct: 1233 DECSPLPCLNNGVCKDLVGEFICECPSG----YTGQRCE 1267
Score = 43.1 bits (100), Expect = 0.001
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQAVQVHGSVLGMVIGGTAGVIFL 732
C NPC+N CV+ SC+C G ++G+RC+ Q G L + G G + L
Sbjct: 1387 CQSNPCRNQATCVDELNSYSCKCQPG----FSGKRCETEQSTGFNLDFEVSGIYGYVML 1441
Score = 31.2 bits (69), Expect = 3.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERCQ 710
C +PC N GICV+ C C+ G + G C+
Sbjct: 1273 CSSSPCLNKGICVDGVAGYRCTCVKG----FVGLHCE 1305
Score = 31.2 bits (69), Expect = 3.7
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 674 CDPNPCQNDGICVNVKGMASCRCISGHAFFYTGERC 709
C NPC N+ +C + G C+C G + G RC
Sbjct: 1311 CQSNPCLNNAVCEDQVGGFLCKCPPG----FLGTRC 1342
>gi|139394621 chondroitin sulfate proteoglycan 5 (neuroglycan C)
precursor [Homo sapiens]
Length = 539
Score = 42.7 bits (99), Expect = 0.001
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 646 GQPSRQKRSVENTGPLED----HNWPQYFRDPCD--PNPCQNDGICVNVKGM-ASCRCIS 698
G+P R S EN HN R CD P+ C N G C V+ + A CRC +
Sbjct: 344 GEPGRDLASSENGTECRSGFVRHNGS--CRSVCDLFPSYCHNGGQCYLVENIGAFCRCNT 401
Query: 699 GHAFFYTGERCQAVQVHGSVLGMVIGGTAGVIFLTFSIIAILSQR 743
++ G RC+++ V+ + +G A V+ L F + +++
Sbjct: 402 QDYIWHKGMRCESIITDFQVMCVAVGSAALVLLLLFMMTVFFAKK 446
>gi|75709198 nephronectin [Homo sapiens]
Length = 565
Score = 42.4 bits (98), Expect = 0.002
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 265 LLDHCTFEKANICGMIQGTRDDTDWAHQDSAQAGEVDHTLLGQCTGAGYFMQFSTSSGSA 324
L+ C F+ +CG I+ +D W G+ + G G A
Sbjct: 418 LVHSCNFDHG-LCGWIREKDNDLHWEPIRDPAGGQYLTVSAAKAPG-----------GKA 465
Query: 325 EEAALLESRILYPKRKQQCLQFFYKMTGSPSDRLVVWVRRDDSTGNVRKLVKVQTFQGDD 384
L R+++ CL F +K+TG S L V+VR+ + G + +
Sbjct: 466 ARLVLPLGRLMHSG--DLCLSFRHKVTGLHSGTLQVFVRKHGAHG-------AALWGRNG 516
Query: 385 DHNWKIAHVVLKEEQKFRYLFQGTKGDPQNSTGGIYLDDITLTETPC 431
H W+ + L+ +F+G K + TG I LDD++L + C
Sbjct: 517 GHGWRQTQITLRGADIKSVVFKGEK--RRGHTGEIGLDDVSLKKGHC 561
>gi|57242793 interphotoreceptor matrix proteoglycan 2 [Homo sapiens]
Length = 1241
Score = 40.8 bits (94), Expect = 0.005
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 674 CDPNP--CQNDGICVNVKGM-ASCRCISGHAFFYTGERCQAVQVHGSVLGMVIGGTAGVI 730
CD P C NDG C + G A CRC G ++Y G+ C+ ++G+ I G++
Sbjct: 1054 CDLQPDFCLNDGKCDIMPGHGAICRCRVGENWWYRGKHCEEFVSEPVIIGITIASVVGLL 1113
Query: 731 FLTFSII 737
+ +II
Sbjct: 1114 VIFSAII 1120
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,324,849
Number of Sequences: 37866
Number of extensions: 1374888
Number of successful extensions: 3890
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 3203
Number of HSP's gapped (non-prelim): 726
length of query: 746
length of database: 18,247,518
effective HSP length: 110
effective length of query: 636
effective length of database: 14,082,258
effective search space: 8956316088
effective search space used: 8956316088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.