TRAF6 13992

Name: TRAF6	Sequence: fasta or formatted (522aa)		NCBI GI: 22027630
Description: TNF receptor-associated factor 6		Referenced in: Coiled-Coil Proteins MAP Kinase Pathways MicroRNAs TNF and Related Signals Toll-like Receptors
Other entries for this name: alt mRNA [522aa] TNF receptor-associated factor 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 29 2 C cysteine 5.7 30 2 D aspartate 5.0 26 2 E glutamate 7.9 41 3 F phenylalanine 4.2 22 1 G glycine 4.6 24 2 H histidine 4.6 24 1 I isoleucine 5.9 31 2 K lysine 4.4 23 1 L leucine 8.4 44 2 M methionine 3.8 20 1 N asparagine 4.0 21 1 P proline 5.4 28 2 Q glutamine 6.1 32 2 R arginine 5.9 31 2 S serine 6.5 34 3 T threonine 4.8 25 1 V valine 4.4 23 2 W tryptophan 0.4 2 1 Y tyrosine 2.3 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TNF receptor-associated factor 6 TRAF6 1.000 TNF receptor-associated factor 6 TRAF2 0.162 TNF receptor-associated factor 2 TRAF4 0.160 TNF receptor-associated factor 4 TRAF3 0.158 TNF receptor-associated factor 3 isoform 1 TRAF3 0.158 TNF receptor-associated factor 3 isoform 1 TRAF5 0.145 TNF receptor-associated factor 5 TRAF5 0.145 TNF receptor-associated factor 5 TRAF5 0.145 TNF receptor-associated factor 5 TRAF3 0.138 TNF receptor-associated factor 3 isoform 2 TRAF1 0.075 TNF receptor-associated factor 1 RNF151 0.038 ring finger protein 151 PDZRN3 0.037 PDZ domain containing ring finger 3 RNF41 0.032 ring finger protein 41 isoform 1 RNF41 0.032 ring finger protein 41 isoform 1 TRAF7 0.030 TNF receptor-associated factor 7 RNF125 0.030 ring finger protein 125 XAF1 0.029 XIAP associated factor 1 isoform 1 TRIM8 0.027 tripartite motif-containing 8 XAF1 0.025 XIAP associated factor 1 isoform 2 RAG1 0.024 recombination activating gene 1 LNX1 0.024 ligand of numb-protein X 1 isoform a RNF114 0.024 zinc finger protein 313 TRIM22 0.023 tripartite motif-containing 22 LONRF2 0.022 LON peptidase N-terminal domain and ring finger 2 [... RFWD2 0.022 ring finger and WD repeat domain 2 isoform a RFWD2 0.022 ring finger and WD repeat domain 2 isoform d24 [Homo... MEP1A 0.021 meprin A alpha LONRF1 0.021 LON peptidase N-terminal domain and ring finger 1 [H... TRIM40 0.021 tripartite motif-containing 40 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.