BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|15147333 tripartite motif-containing 37 protein [Homo sapiens] (964 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|52487176 tripartite motif-containing 37 protein [Homo sapiens] 1937 0.0 gi|15147333 tripartite motif-containing 37 protein [Homo sapiens] 1937 0.0 gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 78 3e-14 gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 78 3e-14 gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 75 4e-13 gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 72 2e-12 gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 72 2e-12 gi|22749269 ring finger protein 129 [Homo sapiens] 69 2e-11 gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 68 4e-11 gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 68 4e-11 gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 65 3e-10 gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 65 3e-10 gi|157743261 tripartite motif-containing 75 [Homo sapiens] 64 5e-10 gi|56605981 tripartite motif-containing 72 [Homo sapiens] 64 7e-10 gi|32454739 tripartite motif-containing 3 [Homo sapiens] 63 2e-09 gi|32454737 tripartite motif-containing 3 [Homo sapiens] 63 2e-09 gi|117938316 tripartite motif-containing 22 [Homo sapiens] 62 3e-09 gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 62 3e-09 gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 62 3e-09 gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 62 3e-09 gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 62 3e-09 gi|37622899 ring finger protein 137 [Homo sapiens] 62 3e-09 gi|15208660 tripartite motif protein 21 [Homo sapiens] 61 4e-09 gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 60 8e-09 gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 60 8e-09 gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 59 2e-08 gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 59 2e-08 gi|5730009 ret finger protein [Homo sapiens] 57 8e-08 gi|20270353 tripartite motif-containing 43 [Homo sapiens] 56 2e-07 gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 55 2e-07 >gi|52487176 tripartite motif-containing 37 protein [Homo sapiens] Length = 964 Score = 1937 bits (5017), Expect = 0.0 Identities = 964/964 (100%), Positives = 964/964 (100%) Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL Sbjct: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60 Query: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW Sbjct: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120 Query: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR Sbjct: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180 Query: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK Sbjct: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240 Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP Sbjct: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300 Query: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII Sbjct: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360 Query: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT Sbjct: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420 Query: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM Sbjct: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480 Query: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS Sbjct: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540 Query: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR Sbjct: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600 Query: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR Sbjct: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660 Query: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA Sbjct: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720 Query: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP Sbjct: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780 Query: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV Sbjct: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840 Query: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM Sbjct: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900 Query: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE Sbjct: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960 Query: 961 NSGR 964 NSGR Sbjct: 961 NSGR 964 >gi|15147333 tripartite motif-containing 37 protein [Homo sapiens] Length = 964 Score = 1937 bits (5017), Expect = 0.0 Identities = 964/964 (100%), Positives = 964/964 (100%) Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL Sbjct: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 60 Query: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW Sbjct: 61 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 120 Query: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR Sbjct: 121 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 180 Query: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK Sbjct: 181 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240 Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP Sbjct: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 300 Query: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII Sbjct: 301 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 360 Query: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT Sbjct: 361 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 420 Query: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM Sbjct: 421 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 480 Query: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS Sbjct: 481 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 540 Query: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR Sbjct: 541 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 600 Query: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR Sbjct: 601 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 660 Query: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA Sbjct: 661 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 720 Query: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP Sbjct: 721 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 780 Query: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV Sbjct: 781 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 840 Query: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM Sbjct: 841 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 900 Query: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE Sbjct: 901 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 960 Query: 961 NSGR 964 NSGR Sbjct: 961 NSGR 964 >gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] Length = 488 Score = 78.2 bits (191), Expect = 3e-14 Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 13/225 (5%) Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT--EQRAQCPHCRAPLQLRE 62 ++E++ C +C+E L++ + C C +CI RW E+ CP CR + R Sbjct: 19 ALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRS 77 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 L R ++ ++ + K + ++ C HHE LS+FC+ ++ +C CA+ Sbjct: 78 L---RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAI-SH 133 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREI 182 H HT PL + +++ K+ + + L ++L E+ E+ ++ + R ++I Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193 Query: 183 RNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEH 227 E + RLD + + L L +E ++L+ L + H Sbjct: 194 LREFEELHRRLDEEQQVLLSRLE------EEEQDILQRLRENAAH 232 >gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] Length = 518 Score = 78.2 bits (191), Expect = 3e-14 Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 13/225 (5%) Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT--EQRAQCPHCRAPLQLRE 62 ++E++ C +C+E L++ + C C +CI RW E+ CP CR + R Sbjct: 19 ALENLQVEASCSVCLEYLKEPVII-ECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRS 77 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 L R ++ ++ + K + ++ C HHE LS+FC+ ++ +C CA+ Sbjct: 78 L---RPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAI-SH 133 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREI 182 H HT PL + +++ K+ + + L ++L E+ E+ ++ + R ++I Sbjct: 134 THRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQI 193 Query: 183 RNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEH 227 E + RLD + + L L +E ++L+ L + H Sbjct: 194 LREFEELHRRLDEEQQVLLSRLE------EEEQDILQRLRENAAH 232 >gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo sapiens] Length = 493 Score = 74.7 bits (182), Expect = 4e-13 Identities = 65/268 (24%), Positives = 117/268 (43%), Gaps = 23/268 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62 ++ E C IC+E L L C C +C+ + L + + CP CR Q Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 + R + ++L ++L E + D C H EKL +FC K IC C Sbjct: 67 IRPNRHVANLVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173 G HTF P E+ +++ K+ + LR++ E L ++ + + Sbjct: 123 HRGHHTF-PTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181 Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+ Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241 Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259 S EL+ ++ + V K +F Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268 >gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo sapiens] Length = 326 Score = 72.0 bits (175), Expect = 2e-12 Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 23/268 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62 ++ E C IC+E L L C C +C+ + L + + CP CR Q Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 + R + ++L ++L E + D C H EKL +FC K IC C Sbjct: 67 IRPNRHVANIVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173 G HTF E+ +++ K+ + LR++ E L ++ + + Sbjct: 123 HRGHHTFL-TEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181 Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+ Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241 Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259 S EL+ ++ + V K +F Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268 >gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo sapiens] Length = 347 Score = 72.0 bits (175), Expect = 2e-12 Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 23/268 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI-----RRWLTEQRAQCPHCRAPLQLRE 62 ++ E C IC+E L L C C +C+ + L + + CP CR Q Sbjct: 8 NVKEEVTCPICLELLTQP-LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 66 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 + R + ++L ++L E + D C H EKL +FC K IC C Sbjct: 67 IRPNRHVANIVEKLREVKLSP----EGQKVDHCARHGEKLLLFCQEDGKVICWLCERSQE 122 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN--------- 173 G HTF E+ +++ K+ + LR++ E L ++ + + Sbjct: 123 HRGHHTFL-TEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTNV 181 Query: 174 -AKDERVREIRNAVEM-MIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 A E++R+I + E + L+ + ++ L +L +T + Q+T+ L L+ ++EH+L+ Sbjct: 182 LADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQG 241 Query: 232 CSKSELISKSSEILMMFQQVHRKPMASF 259 S EL+ ++ + V K +F Sbjct: 242 -SVMELLQGVDGVIKRTENVTLKKPETF 268 >gi|22749269 ring finger protein 129 [Homo sapiens] Length = 471 Score = 69.3 bits (168), Expect = 2e-11 Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 20/292 (6%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIR-RWLT-EQRAQCPHCRAPLQLRELVN 65 ++ E C IC+E L+D + +C C SC+ W + CP CR + Sbjct: 9 NLQEESSCPICLEYLKDP-VTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFRR 67 Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125 +T+ LQ+ + + E CE H++ L++FC + +C QC+ + H Sbjct: 68 NPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCS-FSTKHQ 126 Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRRL--MELISLVQ-----EVERNVEAVR---NAK 175 H P+ + H + + LR + +E + ++Q E+++ VE R N++ Sbjct: 127 KHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKREEINSE 186 Query: 176 DERVR-EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSK 234 E++R ++N EM++ ++ + N L L L+ L+ LL+EVE + S Sbjct: 187 FEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLREVEGKSVQ-SN 245 Query: 235 SELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENF 286 EL++++ + +Q + + SF T + L P Y +++ F Sbjct: 246 LELLTQAKSMHHKYQNLKCPELFSFRLT----KYGFSLPPQYSGLDRIIKPF 293 >gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] Length = 744 Score = 68.2 bits (165), Expect = 4e-11 Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 30/264 (11%) Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71 C IC+E+ ++ ++ P C C C++ ++ CP CR L E Sbjct: 23 CSICLERYKNPKVLP-CLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNF 81 Query: 72 -VTQQLDTLQLCSLTKHEEN------------EKDKCENHHEKLSVF-CWTCKKCICHQC 117 +T +D LQ + EE+ + C NH + F C +C+ +C +C Sbjct: 82 FITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCREC 141 Query: 118 ALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDE 177 G H H PL ++ EQH + ++ + +RL E+ S +Q + + + N K Sbjct: 142 T--EGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKAS 199 Query: 178 RVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV---EHQLRSCSK 234 V +I + + + L+ + K + LM + + + ++L+S L + + ++SCS Sbjct: 200 IVDDIHSTFDELQKTLNVR---KSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSN 256 Query: 235 SELIS----KSSEILMMFQQVHRK 254 + +E+L++ +Q+ K Sbjct: 257 FTAQALNHGTETEVLLVKKQMSEK 280 >gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] Length = 771 Score = 68.2 bits (165), Expect = 4e-11 Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 30/264 (11%) Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71 C IC+E+ ++ ++ P C C C++ ++ CP CR L E Sbjct: 50 CSICLERYKNPKVLP-CLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNF 108 Query: 72 -VTQQLDTLQLCSLTKHEEN------------EKDKCENHHEKLSVF-CWTCKKCICHQC 117 +T +D LQ + EE+ + C NH + F C +C+ +C +C Sbjct: 109 FITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMCREC 168 Query: 118 ALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDE 177 G H H PL ++ EQH + ++ + +RL E+ S +Q + + + N K Sbjct: 169 T--EGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQKAS 226 Query: 178 RVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV---EHQLRSCSK 234 V +I + + + L+ + K + LM + + + ++L+S L + + ++SCS Sbjct: 227 IVDDIHSTFDELQKTLNVR---KSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSN 283 Query: 235 SELIS----KSSEILMMFQQVHRK 254 + +E+L++ +Q+ K Sbjct: 284 FTAQALNHGTETEVLLVKKQMSEK 307 >gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] Length = 550 Score = 65.1 bits (157), Expect = 3e-10 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%) Query: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65 +S A +C +C + ++A +C C C C R +C R PL LV Sbjct: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211 Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125 V+++L ++ + T HE ENH S++C CK +C+QC L G H Sbjct: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259 Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175 H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+ Sbjct: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319 Query: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226 D + + ++AR++ + ++KL + Q L Q T L+E L+ ++ Sbjct: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375 >gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] Length = 710 Score = 65.1 bits (157), Expect = 3e-10 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%) Query: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65 +S A +C +C + ++A +C C C C R +C R PL LV Sbjct: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211 Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125 V+++L ++ + T HE ENH S++C CK +C+QC L G H Sbjct: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259 Query: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175 H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+ Sbjct: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319 Query: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226 D + + ++AR++ + ++KL + Q L Q T L+E L+ ++ Sbjct: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375 >gi|157743261 tripartite motif-containing 75 [Homo sapiens] Length = 468 Score = 64.3 bits (155), Expect = 5e-10 Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 21/286 (7%) Query: 14 RCFICMEKLRDARLCPHCSKLCCFSCIRR-WLTEQRA-QCPHCRAPLQLRELVNCRWAEE 71 +C IC++ L D + C C SCI++ WL Q CP CR Q + Sbjct: 15 KCSICLDYLSDP-VTIECGHNFCRSCIQQSWLDLQELFPCPVCRHQCQEGHFRSNTQLGR 73 Query: 72 VTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKP 131 + + LQ K ++ E CE H++ LSVFC +C C H GH +P Sbjct: 74 MIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCT-QPPDHQGHHVRP 132 Query: 132 LAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVE---- 187 + + + + + L+++L +L L+ + +R + + +E+ + E Sbjct: 133 IEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQRQELSSEFEHLNQ 192 Query: 188 -------MMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 240 +++RL + K+ L T+ + + L+S L +V +L S+ EL+S+ Sbjct: 193 FLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVV-ELSELSELELLSQ 251 Query: 241 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENF 286 + +F + + S + + D S P Y + +++ F Sbjct: 252 ----IKIFYESENESSPSIFSIHLKRDGCS-FPPQYSALQRIIKKF 292 >gi|56605981 tripartite motif-containing 72 [Homo sapiens] Length = 477 Score = 63.9 bits (154), Expect = 7e-10 Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 32/264 (12%) Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQ----CPHCRAPLQLRELVNCRWAE 70 C +C++ L DA + C C +C+ R E A CP C+AP + + L Sbjct: 14 CPLCLQ-LFDAPVTAECGHSFCRACLGRVAGEPAADGTVLCPCCQAPTRPQALST----- 67 Query: 71 EVTQQLDTLQLCSLTKH-EENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF 129 LQL L + + + CE H + LS++C + +C CA G H GH Sbjct: 68 -------NLQLARLVEGLAQVPQGHCEEHLDPLSIYCEQDRALVCGVCASLGS-HRGHRL 119 Query: 130 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAV--- 186 P AE + + T++ ++ +L+ M V +E + V +E VR+ R AV Sbjct: 120 LPAAEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEV----EETVRQFRGAVGEQ 175 Query: 187 ----EMMIARLDTQLKNKLITLMGQK-TSLTQETELLESLLQEVEHQLRSCSKSELISKS 241 + +A L+ L + + G+ +L +E L S L+++ Q+ + Sbjct: 176 LGKMRVFLAALEGSLDCEAERVRGEAGVALRRELGSLNSYLEQL-RQMEKVLEEVADKPQ 234 Query: 242 SEILMMFQQVHRKPMASFVTTPVP 265 +E LM + V + +P P Sbjct: 235 TEFLMKYCLVTSRLQKILAESPPP 258 >gi|32454739 tripartite motif-containing 3 [Homo sapiens] Length = 744 Score = 62.8 bits (151), Expect = 2e-09 Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 27/272 (9%) Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71 C IC+++ + ++ P C C C++ ++ Q CP CR L E Sbjct: 22 CSICLDRYQCPKVLP-CLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNF 80 Query: 72 -VTQQLDTLQLCSLTKHEENEKD----------KCENHHEK-LSVFCWTCKKCICHQCAL 119 ++ ++ +Q H+ + C NH K + +C C+ +C +C Sbjct: 81 FISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECR- 139 Query: 120 WGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERV 179 G H H L ++ EQH + ++ +R RL +L + + V + ++ K E + Sbjct: 140 -AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEAL 198 Query: 180 REIRNA---VEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSE 236 +I A +E + + L + L T+ G K + Q L++L Q EH SCS +E Sbjct: 199 AQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQ--LDTLRQGQEHIGSSCSFAE 256 Query: 237 ---LISKSSEILMMFQQVHRKPMASFVTTPVP 265 + + E+L++ + + R+ +A+ P Sbjct: 257 QALRLGSAPEVLLVRKHM-RERLAALAAQAFP 287 >gi|32454737 tripartite motif-containing 3 [Homo sapiens] Length = 744 Score = 62.8 bits (151), Expect = 2e-09 Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 27/272 (9%) Query: 15 CFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRA--QCPHCRAPLQLRELVNCRWAEE- 71 C IC+++ + ++ P C C C++ ++ Q CP CR L E Sbjct: 22 CSICLDRYQCPKVLP-CLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNF 80 Query: 72 -VTQQLDTLQLCSLTKHEENEKD----------KCENHHEK-LSVFCWTCKKCICHQCAL 119 ++ ++ +Q H+ + C NH K + +C C+ +C +C Sbjct: 81 FISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECR- 139 Query: 120 WGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERV 179 G H H L ++ EQH + ++ +R RL +L + + V + ++ K E + Sbjct: 140 -AGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEAL 198 Query: 180 REIRNA---VEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSE 236 +I A +E + + L + L T+ G K + Q L++L Q EH SCS +E Sbjct: 199 AQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQ--LDTLRQGQEHIGSSCSFAE 256 Query: 237 ---LISKSSEILMMFQQVHRKPMASFVTTPVP 265 + + E+L++ + + R+ +A+ P Sbjct: 257 QALRLGSAPEVLLVRKHM-RERLAALAAQAFP 287 >gi|117938316 tripartite motif-containing 22 [Homo sapiens] Length = 498 Score = 62.0 bits (149), Expect = 3e-09 Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 22/250 (8%) Query: 1 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ------RAQCPHC 54 MD I + C IC+E L + L C C +CI + E + CP C Sbjct: 1 MDFSVKVDIEKEVTCPICLELLTEP-LSLDCGHSFCQACITAKIKESVIISRGESSCPVC 59 Query: 55 RAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCIC 114 + Q L R + +++ +++ + E ++D CE+H +KL +FC K IC Sbjct: 60 QTRFQPGNLRPNRHLANIVERVKEVKM---SPQEGQKRDVCEHHGKKLQIFCKEDGKVIC 116 Query: 115 HQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRN- 173 C L H GH + E+ ++ K+ + +L + E L ++ + A +N Sbjct: 117 WVCEL-SQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNY 175 Query: 174 AKDERVREIRNAVEMMI----------ARLDTQLKNKLITLMGQKTSLTQETELLESLLQ 223 + ER + ++ EM + +L+ N L L L Q+ + +L+ Sbjct: 176 IQIERQKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLIS 235 Query: 224 EVEHQLRSCS 233 +++ +LR S Sbjct: 236 DLQRRLRGSS 245 >gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] Length = 270 Score = 62.0 bits (149), Expect = 3e-09 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61 ++ E C IC+E L + L C C +CI + +T ++ CP C Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121 L + + ++L ++L + ++D C++H EKL +FC +K IC C Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123 Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171 G HT FK E + + + K EE KL + E S +V+ + + Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 + D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE + Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242 Query: 232 CSKSELISKSSEIL 245 S EL+ S I+ Sbjct: 243 WSTMELLQDMSGIM 256 >gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] Length = 488 Score = 62.0 bits (149), Expect = 3e-09 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61 ++ E C IC+E L + L C C +CI + +T ++ CP C Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121 L + + ++L ++L + ++D C++H EKL +FC +K IC C Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123 Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171 G HT FK E + + + K EE KL + E S +V+ + + Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 + D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE + Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242 Query: 232 CSKSELISKSSEIL 245 S EL+ S I+ Sbjct: 243 WSTMELLQDMSGIM 256 >gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] Length = 488 Score = 62.0 bits (149), Expect = 3e-09 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61 ++ E C IC+E L + L C C +CI + +T ++ CP C Sbjct: 8 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121 L + + ++L ++L + ++D C++H EKL +FC +K IC C Sbjct: 67 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 123 Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171 G HT FK E + + + K EE KL + E S +V+ + + Sbjct: 124 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 183 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 + D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE + Sbjct: 184 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 242 Query: 232 CSKSELISKSSEIL 245 S EL+ S I+ Sbjct: 243 WSTMELLQDMSGIM 256 >gi|51477690 tripartite motif-containing 6 and tripartite motif-containing 34 [Homo sapiens] Length = 842 Score = 62.0 bits (149), Expect = 3e-09 Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 21/254 (8%) Query: 8 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQ--RAQCPHCRAPLQLR 61 ++ E C IC+E L + L C C +CI + +T ++ CP C Sbjct: 362 NVQEEVTCPICLELLTEP-LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 420 Query: 62 ELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG 121 L + + ++L ++L + ++D C++H EKL +FC +K IC C Sbjct: 421 HLQANQHLANIVERLKEVKL---SPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQ 477 Query: 122 GMHGGHT------FKPLAEIYE---QHVTKVNEEVAKLRRRLM-ELISLVQEVERNVEAV 171 G HT FK E + + + K EE KL + E S +V+ + + Sbjct: 478 EHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRI 537 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 + D+ + N + + RL+ + K L + L Q+ +L+ L+ +VE + Sbjct: 538 QTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR-SQ 596 Query: 232 CSKSELISKSSEIL 245 S EL+ S I+ Sbjct: 597 WSTMELLQDMSGIM 610 Score = 60.5 bits (145), Expect = 8e-09 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%) Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62 I E C IC+E L + L C C +CI R + Q + CP C+ Q Sbjct: 37 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 95 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 L R + ++L + L ++ + C +H EKL +FC K IC C Sbjct: 96 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 152 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180 G HTF + E+ +++ K E + KL+ E L + + +N + ER R Sbjct: 153 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211 Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 ++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + + Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271 Query: 232 CSKSELISKSSEI 244 S EL+ S++ Sbjct: 272 -STMELLQDVSDV 283 >gi|37622899 ring finger protein 137 [Homo sapiens] Length = 485 Score = 61.6 bits (148), Expect = 3e-09 Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 34/251 (13%) Query: 6 VESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRR-WLTEQRAQ-----CPHCRAPLQ 59 VE+I E C ICM LR+ + C C SC+ W +Q CP CRAP+Q Sbjct: 7 VEAIVEEVACPICMTFLREP-MSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQ 65 Query: 60 LRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCAL 119 R L W ++ ++ ++L L + D CE H EKL +FC +C C+ Sbjct: 66 PRNL-RPNW--QLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACS- 121 Query: 120 WGGMHGGHTFKPLA--------EIYE--QHVTKVNEEVAKL----RRRL--------MEL 157 H H+ P+ E++E +H+ K EE KL R+R Sbjct: 122 QSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRK 181 Query: 158 ISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETEL 217 S+V E E+ + + K R++ V +A L + + L + L Q++++ Sbjct: 182 QSIVWEFEK-YQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQV 240 Query: 218 LESLLQEVEHQ 228 L ++ E++ + Sbjct: 241 LWRMIAELKER 251 >gi|15208660 tripartite motif protein 21 [Homo sapiens] Length = 475 Score = 61.2 bits (147), Expect = 4e-09 Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 19/238 (7%) Query: 11 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAE 70 E C IC++ + + C C CI + + CP CR L+ N R Sbjct: 12 EEVTCPICLDPFVEP-VSIECGHSFCQECISQVGKGGGSVCPVCRQRFLLK---NLRPNR 67 Query: 71 EVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFK 130 ++ ++ L+ S E + ++C H E+L +FC K +C CA H H Sbjct: 68 QLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCA-QSRKHRDHAMV 126 Query: 131 PLAEIYEQHVTKVNEEVAKLRRR--LMELISLVQEVER-----NVEAVRNAKDERVREIR 183 PL E +++ K+ + +LRR+ L E + + ++R VE ++ + + Sbjct: 127 PLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHAEFVQQK 186 Query: 184 NAV----EMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSEL 237 N + + + L+ + +L L ++ L Q+++ L+ L+ E++ R C S L Sbjct: 187 NFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELD---RRCHSSAL 241 >gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] Length = 488 Score = 60.5 bits (145), Expect = 8e-09 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%) Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62 I E C IC+E L + L C C +CI R + Q + CP C+ Q Sbjct: 9 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 67 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 L R + ++L + L ++ + C +H EKL +FC K IC C Sbjct: 68 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 124 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180 G HTF + E+ +++ K E + KL+ E L + + +N + ER R Sbjct: 125 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 183 Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 ++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + + Sbjct: 184 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 243 Query: 232 CSKSELISKSSEI 244 S EL+ S++ Sbjct: 244 -STMELLQDVSDV 255 >gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] Length = 516 Score = 60.5 bits (145), Expect = 8e-09 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 23/253 (9%) Query: 9 IAEVFRCFICMEKLRDARLCPHCSKLCCFSCI----RRWLTEQRAQ--CPHCRAPLQLRE 62 I E C IC+E L + L C C +CI R + Q + CP C+ Q Sbjct: 37 IREEVTCPICLELLTEP-LSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGN 95 Query: 63 LVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGG 122 L R + ++L + L ++ + C +H EKL +FC K IC C Sbjct: 96 LRPNRHLANIVRRLREVVL---GPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQE 152 Query: 123 MHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD-ERVR- 180 G HTF + E+ +++ K E + KL+ E L + + +N + ER R Sbjct: 153 HRGHHTFL-VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRI 211 Query: 181 -----EIRNAVEMM----IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRS 231 ++RN ++ + + +L+ + K L + + L +T+ L L+ ++E + + Sbjct: 212 QTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQG 271 Query: 232 CSKSELISKSSEI 244 S EL+ S++ Sbjct: 272 -STMELLQDVSDV 283 >gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapiens] Length = 481 Score = 58.9 bits (141), Expect = 2e-08 Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 21/270 (7%) Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT------EQRAQCPHCRAPL 58 SV S+A+ C IC LR+ + C C +C+ R+ E+ CP C+ P Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPF 64 Query: 59 QLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCA 118 + V + ++ LQL S E+D C+ H EK+ FC + +C C Sbjct: 65 RPGSFRPNWQLANVVENIERLQLVSTLGL--GEEDVCQEHGEKIYFFCEDDEMQLCVVCR 122 Query: 119 LWGGMHGGHTFKPL---AEIYEQHVTKVNEEVAKLRRRLMELIS----LVQEVERNVEAV 171 G H HT + L A Y + + K + + K R + E+ S +Q + V Sbjct: 123 -EAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTK 181 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTS----LTQETELLESLLQEVEH 227 R +R +E + L QL+++ ++ Q+ + E +L++E+E Sbjct: 182 RQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEE 241 Query: 228 QLRSCSKSELISKSSEILMMFQQVHRKPMA 257 + ++ L S ++ + RKP+A Sbjct: 242 KNERPARELLTDIRSTLIRCETRKCRKPVA 271 >gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapiens] Length = 395 Score = 58.9 bits (141), Expect = 2e-08 Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 21/270 (7%) Query: 5 SVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT------EQRAQCPHCRAPL 58 SV S+A+ C IC LR+ + C C +C+ R+ E+ CP C+ P Sbjct: 6 SVTSLADEVNCPICQGTLREP-VTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPF 64 Query: 59 QLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCA 118 + V + ++ LQL S E+D C+ H EK+ FC + +C C Sbjct: 65 RPGSFRPNWQLANVVENIERLQLVSTLGL--GEEDVCQEHGEKIYFFCEDDEMQLCVVCR 122 Query: 119 LWGGMHGGHTFKPL---AEIYEQHVTKVNEEVAKLRRRLMELIS----LVQEVERNVEAV 171 G H HT + L A Y + + K + + K R + E+ S +Q + V Sbjct: 123 -EAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTK 181 Query: 172 RNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTS----LTQETELLESLLQEVEH 227 R +R +E + L QL+++ ++ Q+ + E +L++E+E Sbjct: 182 RQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEE 241 Query: 228 QLRSCSKSELISKSSEILMMFQQVHRKPMA 257 + ++ L S ++ + RKP+A Sbjct: 242 KNERPARELLTDIRSTLIRCETRKCRKPVA 271 >gi|5730009 ret finger protein [Homo sapiens] Length = 513 Score = 57.0 bits (136), Expect = 8e-08 Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 30/303 (9%) Query: 7 ESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLT-EQRAQCPHCRAPLQLRELVN 65 E + + C +C++ + + +CC R W T E CP CR R + Sbjct: 8 ECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRHMRP 67 Query: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125 R VTQ + L+ E CE H E L ++C + IC C H Sbjct: 68 NRHLANVTQLVKQLRT-ERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR-SREHR 125 Query: 126 GHTFKPLAEIYE----------QHVTKVNEEVAKLRRRLM------ELISLVQEVERNVE 169 GH+ PL E E H+ +V + K RRR EL+SL Q +ER E Sbjct: 126 GHSVLPLEEAVEGFKEQIQNQLDHLKRVKD--LKKRRRAQGEQARAELLSLTQ-MER--E 180 Query: 170 AVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQL 229 + ++ ++ ++ARL+ ++ G T + L SL+ ++E + Sbjct: 181 KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ 240 Query: 230 RSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTL 289 + ++ EL+ + L +++ R P ++T PPD ++ F+ E+ Sbjct: 241 QQPTR-ELLQDIGDTLSRAERI-RIP-EPWIT---PPDLQEKIHIFAQKCLFLTESLKQF 294 Query: 290 RQR 292 ++ Sbjct: 295 TEK 297 >gi|20270353 tripartite motif-containing 43 [Homo sapiens] Length = 446 Score = 55.8 bits (133), Expect = 2e-07 Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 32/287 (11%) Query: 1 MDEQSVESIAEVFRCFICMEKLRD-ARLCPHCSKLCCFSCI-RRWLTEQR-AQCPHCRAP 57 MD + + C IC+ L D +C C C C+ W Q A CP CR P Sbjct: 1 MDSDFSHAFQKELTCVICLNYLVDPVTIC--CGHSFCRPCLCLSWEEAQSPANCPACREP 58 Query: 58 LQLRELVNCRWAEEVTQQLDTL-QLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQ 116 + + + L T+ + SL + +EK C H + +FC K +C Sbjct: 59 SPKMDFKT----NILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLL 114 Query: 117 CALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKD 176 C+ HG H P+ E E+H K+ +++ L +++ E + E R R Sbjct: 115 CSN-SQEHGAHKHHPIEEAAEEHREKLLKQMRILWKKIQENQRNLYEEGRTAFLWRGNVV 173 Query: 177 ERVREIRNAVEMM-----------IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEV 225 R + IRN + + RL+ + + L + Q+++ L+ + QE+ Sbjct: 174 LRAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQEL 233 Query: 226 EHQLRSCSKS--ELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTS 270 + C K EL+ +I+ + V + PV P+ T+ Sbjct: 234 ---MEMCHKPDVELLQDLGDIVARSESV-----LLHMPQPVNPELTA 272 >gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] Length = 353 Score = 55.5 bits (132), Expect = 2e-07 Identities = 53/255 (20%), Positives = 111/255 (43%), Gaps = 28/255 (10%) Query: 2 DEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRR--------W--------LT 45 D +E++ + C IC+E + C C C W ++ Sbjct: 10 DGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMS 69 Query: 46 EQRAQCPHCRAPLQL-RELVNCRWAEEVTQQLDTL--QLCSLTKHEENEKDKCENHH-EK 101 R +CP CR + + R V + + + + Q CS ++ C+ H EK Sbjct: 70 GGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPMCKEHEDEK 129 Query: 102 LSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLV 161 ++++C TC+ C C ++ G+H PL +++ T++N ++ L + +++ Sbjct: 130 INIYCLTCEVPTCSMCKVF-GIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTII 188 Query: 162 QEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETEL--LE 219 ++E + + + E+ + + A LD + K++L+ Q+ + QE +L +E Sbjct: 189 TQLEDSRRVTKENSHQVKEELSQKFDTLYAILD-EKKSELL----QRITQEQEKKLSFIE 243 Query: 220 SLLQEVEHQLRSCSK 234 +L+Q+ + QL +K Sbjct: 244 ALIQQYQEQLDKSTK 258 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.129 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,639,415 Number of Sequences: 37866 Number of extensions: 1774348 Number of successful extensions: 9891 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 475 Number of HSP's that attempted gapping in prelim test: 8470 Number of HSP's gapped (non-prelim): 1553 length of query: 964 length of database: 18,247,518 effective HSP length: 112 effective length of query: 852 effective length of database: 14,006,526 effective search space: 11933560152 effective search space used: 11933560152 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.