Guide to the Human Genome
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Name: TRIM37 Sequence: fasta or formatted (964aa) NCBI GI: 15147333
Description:

tripartite motif-containing 37 protein

Referenced in:

Tripartite Motif Family

Other entries for this name:
alt mRNA [964aa] tripartite motif-containing 37 protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         60           4
 C cysteine            3.0         29           2
 D aspartate           6.2         60           2
 E glutamate           9.6         93           2
 F phenylalanine       2.5         24           2
 G glycine             5.1         49           2
 H histidine           2.6         25           2
 I isoleucine          3.3         32           2
 K lysine              5.0         48           2
 L leucine            10.1         97           2
 M methionine          2.7         26           2
 N asparagine          4.3         41           2
 P proline             4.4         42           2
 Q glutamine           5.1         49           2
 R arginine            6.0         58           3
 S serine             10.6        102           4
 T threonine           5.3         51           2
 V valine              5.3         51           3
 W tryptophan          0.9          9           1
 Y tyrosine            1.9         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tripartite motif-containing 37 protein 
TRIM37                1.000   tripartite motif-containing 37 protein 
TRIM39                0.028   tripartite motif-containing 39 isoform 2 
TRIM39                0.028   tripartite motif-containing 39 isoform 1 
TRIM5                 0.026   tripartite motif protein TRIM5 isoform alpha 
TRIM5                 0.025   tripartite motif protein TRIM5 isoform delta 
TRIM5                 0.025   tripartite motif protein TRIM5 isoform gamma 
TRIM60                0.023   ring finger protein 129 
TRIM2                 0.022   tripartite motif-containing 2 isoform 2 
TRIM2                 0.022   tripartite motif-containing 2 isoform 1 
TRIM9                 0.021   tripartite motif protein 9 isoform 2 
TRIM9                 0.021   tripartite motif protein 9 isoform 1 
TRIM75                0.020   tripartite motif-containing 75 
TRIM72                0.020   tripartite motif-containing 72 
TRIM3                 0.020   tripartite motif-containing 3 
TRIM3                 0.020   tripartite motif-containing 3 
TRIM22                0.019   tripartite motif-containing 22 
TRIM34                0.019   tripartite motif protein 34 isoform 3 
TRIM34                0.019   tripartite motif protein 34 isoform 1 
TRIM34                0.019   tripartite motif protein 34 isoform 1 
TRIM6-TRIM34          0.019   tripartite motif-containing 6 and tripartite motif-c...
TRIM68                0.019   ring finger protein 137 
TRIM21                0.019   tripartite motif protein 21 
TRIM6                 0.018   tripartite motif-containing 6 isoform 2 
TRIM6                 0.018   tripartite motif-containing 6 isoform 1 
TRIM10                0.018   tripartite motif-containing 10 isoform 1 
TRIM10                0.018   tripartite motif-containing 10 isoform 2 
TRIM27                0.017   ret finger protein 
TRIM43                0.016   tripartite motif-containing 43 
TRIM63                0.016   muscle specific ring finger protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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