TRIM9 10558

Name: TRIM9	Sequence: fasta or formatted (710aa)		NCBI GI: 190341104
Description: tripartite motif protein 9 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [550aa] tripartite motif protein 9 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 48 3 C cysteine 4.1 29 2 D aspartate 6.1 43 2 E glutamate 5.5 39 3 F phenylalanine 3.4 24 2 G glycine 5.6 40 2 H histidine 3.4 24 1 I isoleucine 3.2 23 2 K lysine 5.2 37 1 L leucine 9.6 68 2 M methionine 2.4 17 1 N asparagine 4.6 33 2 P proline 6.2 44 3 Q glutamine 4.8 34 2 R arginine 5.4 38 2 S serine 7.6 54 2 T threonine 5.2 37 2 V valine 7.2 51 2 W tryptophan 1.0 7 1 Y tyrosine 2.8 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein 9 isoform 1 TRIM9 0.748 tripartite motif protein 9 isoform 2 TRIM67 0.660 tripartite motif-containing 67 TRIM36 0.122 tripartite motif-containing 36 isoform 1 MID2 0.119 midline 2 isoform 2 MID1 0.116 midline 1 MID1 0.116 midline 1 MID1 0.116 midline 1 MID2 0.111 midline 2 isoform 1 TRIM46 0.105 tripartite motif-containing 46 FSD1L 0.054 fibronectin type III and SPRY domain containing 1-li... FSD1L 0.054 fibronectin type III and SPRY domain containing 1-l... TRIM54 0.046 ring finger protein 30 isoform 2 TRIM63 0.042 muscle specific ring finger protein 1 FSD1 0.042 fibronectin type III and SPRY domain containing 1 [H... RNF207 0.039 ring finger protein 207 TRIM54 0.035 ring finger protein 30 isoform 1 CMYA5 0.033 cardiomyopathy associated 5 FSD2 0.033 fibronectin type III and SPRY domain containing 2 [H... TRIM55 0.031 tripartite motif-containing 55 isoform 3 TRIM55 0.031 tripartite motif-containing 55 isoform 1 TRIM55 0.031 tripartite motif-containing 55 isoform 2 TRIM47 0.030 tripartite motif-containing 47 TRIM37 0.028 tripartite motif-containing 37 protein TRIM37 0.028 tripartite motif-containing 37 protein TRIM2 0.026 tripartite motif-containing 2 isoform 2 TRIM2 0.026 tripartite motif-containing 2 isoform 1 TRIM23 0.026 ADP-ribosylation factor domain protein 1 isoform gam... TRIM23 0.026 ADP-ribosylation factor domain protein 1 isoform bet... TRIM23 0.026 ADP-ribosylation factor domain protein 1 isoform alph... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.