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Search of human proteins with 151101407
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
(111 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 223 2e-59
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 217 2e-57
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 195 7e-51
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 195 7e-51
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 195 7e-51
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 194 2e-50
gi|46276863 parathymosin [Homo sapiens] 82 9e-17
gi|17975763 myelin transcription factor 1 [Homo sapiens] 64 3e-11
gi|115529449 upstream binding transcription factor, RNA polymera... 62 8e-11
gi|115529451 upstream binding transcription factor, RNA polymera... 62 8e-11
gi|7657671 upstream binding transcription factor, RNA polymerase... 62 8e-11
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 61 2e-10
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 61 2e-10
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 61 2e-10
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-10
gi|21361639 DIPB protein [Homo sapiens] 60 4e-10
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 60 4e-10
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 60 5e-10
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 60 5e-10
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 60 5e-10
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 59 8e-10
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 59 1e-09
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 59 1e-09
gi|55956788 nucleolin [Homo sapiens] 58 2e-09
gi|21735415 centromere protein B [Homo sapiens] 57 3e-09
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 57 4e-09
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 56 5e-09
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 56 7e-09
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 56 7e-09
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 56 7e-09
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 223 bits (569), Expect = 2e-59
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD
Sbjct: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 217 bits (552), Expect = 2e-57
Identities = 110/111 (99%), Positives = 110/111 (99%), Gaps = 1/111 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNA NEENGEQEADNEVDEEEEEG
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNA-NEENGEQEADNEVDEEEEEG 59
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD
Sbjct: 60 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 195 bits (495), Expect = 7e-51
Identities = 101/111 (90%), Positives = 105/111 (94%), Gaps = 2/111 (1%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNA NEENGEQEADNEVDEE EE
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNA-NEENGEQEADNEVDEEGEES 59
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 60 GEEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 195 bits (495), Expect = 7e-51
Identities = 101/111 (90%), Positives = 105/111 (94%), Gaps = 2/111 (1%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNA NEENGEQEADNEVDEE EE
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNA-NEENGEQEADNEVDEEGEES 59
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 60 GEEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 195 bits (495), Expect = 7e-51
Identities = 101/111 (90%), Positives = 105/111 (94%), Gaps = 2/111 (1%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNA NEENGEQEADNEVDEE EE
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNA-NEENGEQEADNEVDEEGEES 59
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 60 GEEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 194 bits (492), Expect = 2e-50
Identities = 101/111 (90%), Positives = 104/111 (93%), Gaps = 2/111 (1%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MSDAAVDTSSEI KDLKEKKEVV+EAENGRDAPANGNA NEENGEQEAD EVDEE EE
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNA-NEENGEQEADKEVDEEGEES 59
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 60 GEEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 82.0 bits (201), Expect = 9e-17
Identities = 46/108 (42%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
MS+ +V+ ++E++ KDLKEKKE VEE + + E ++ +E +N +EEEEE
Sbjct: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRK--------ERKKEVVEEEENGAEEEEEET 52
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
E+ EEE+EG+ EE++ +E+E+ E KRAAE E+D+ D K+QKT+
Sbjct: 53 AEDGEEEDEGE-EEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 63.9 bits (154), Expect = 3e-11
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 11 EITTKDLKEK-KEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEE 69
E+TT+ ++ + +E+A + + G +EE E+E + E +EEE+E EEEEEEEE
Sbjct: 226 EVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEE 285
Query: 70 GDGEEEDGDEDEEAESATGKRAAED--DEDDDVDTKKQKTDE 109
+ EEE+ +E+EE E + AA D ++D T QK E
Sbjct: 286 EEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPE 327
Score = 57.4 bits (137), Expect = 2e-09
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 1 MSDAAVDTSSE-------ITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEV 53
+ +AA +SE I +D +E EV E + +A +EE+ +Q+
Sbjct: 198 LQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSH 257
Query: 54 DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 99
+EE+EE EEEEEEEE + EEE+ +E+EE E + E++E+++
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 303
Score = 50.8 bits (120), Expect = 2e-07
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 18/129 (13%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
+ DAA + SS+ E+++ EE E + E EE E+E + E +EEEEE
Sbjct: 240 LEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 299
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAE---------------DDEDDDVDTKKQ 105
EEEEEE D ++ A+ A R E D+D D DT +
Sbjct: 300 EEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHSR 359
Query: 106 K---TDEDD 111
K TDE +
Sbjct: 360 KSTVTDESE 368
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 62.4 bits (150), Expect = 8e-11
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 34 PANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKR 90
P + + E E D+E DE++E+ EEEE++E GD E+ GD E E ES G
Sbjct: 627 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
EDDED+D D + DED+
Sbjct: 687 NEEDDEDED-DDEDDDEDEDN 706
Score = 56.6 bits (135), Expect = 4e-09
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA----NGNAENEENGEQEADNEVDEEEEEGGE-E 63
SS T + E +E EE E+ D + N ++ E+G +++ ++E E+G E E
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 688
Query: 64 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 98
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 689 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 62.4 bits (150), Expect = 8e-11
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 34 PANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKR 90
P + + E E D+E DE++E+ EEEE++E GD E+ GD E E ES G
Sbjct: 627 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
EDDED+D D + DED+
Sbjct: 687 NEEDDEDED-DDEDDDEDEDN 706
Score = 56.6 bits (135), Expect = 4e-09
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA----NGNAENEENGEQEADNEVDEEEEEGGE-E 63
SS T + E +E EE E+ D + N ++ E+G +++ ++E E+G E E
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 688
Query: 64 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 98
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 689 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 62.4 bits (150), Expect = 8e-11
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 34 PANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKR 90
P + + E E D+E DE++E+ EEEE++E GD E+ GD E E ES G
Sbjct: 664 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 723
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
EDDED+D D + DED+
Sbjct: 724 NEEDDEDED-DDEDDDEDEDN 743
Score = 56.6 bits (135), Expect = 4e-09
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA----NGNAENEENGEQEADNEVDEEEEEGGE-E 63
SS T + E +E EE E+ D + N ++ E+G +++ ++E E+G E E
Sbjct: 666 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 725
Query: 64 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 98
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 726 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 760
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 60.8 bits (146), Expect = 2e-10
Identities = 27/83 (32%), Positives = 52/83 (62%)
Query: 26 EAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAES 85
E + D+ A + +EE ++E ++E DE++E+G EEE +EE+ + E+ +GDED++ S
Sbjct: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
Query: 86 ATGKRAAEDDEDDDVDTKKQKTD 108
+ D+ED+D D +++ +
Sbjct: 211 EEEEEFGLDEEDEDEDEDEEEEE 233
Score = 56.6 bits (135), Expect = 4e-09
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 22/107 (20%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEE--EGGE 62
A D+ +E+ D +E+ E E+ E+ E++E+GE+E +E D+E+E EG E
Sbjct: 155 APDSDAEVDGVDEEEEDEEGEDEED----------EDDEDGEEEEFDEEDDEDEDVEGDE 204
Query: 63 EE----EEEEEGDGEEEDGDEDEEAESATG------KRAAEDDEDDD 99
++ EEEEE +EED DEDE+ E G KR +D+ +DD
Sbjct: 205 DDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
Score = 55.5 bits (132), Expect = 9e-09
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 40 ENEENGEQEADNEVD----EEEEEGGEEEEEEEEGDGEEEDGD-EDEEAESATG----KR 90
+ E+ ++D EVD EEE+E GE+EE+E++ DGEEE+ D ED+E E G
Sbjct: 149 DREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDE 208
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
+E++E+ +D + + DED+
Sbjct: 209 VSEEEEEFGLDEEDEDEDEDE 229
Score = 54.3 bits (129), Expect = 2e-08
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 32 DAPANGNAENEEN--GEQEAD-NEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATG 88
DA +G E EE+ GE E D ++ D EEEE EE++E+E+ +G+E+D DE E E G
Sbjct: 159 DAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD-DEVSEEEEEFG 217
Query: 89 KRAAEDDEDDDVDT------KKQKTDEDD 111
++DED+D + +K+K + DD
Sbjct: 218 LDEEDEDEDEDEEEEEGGKGEKRKRETDD 246
Score = 45.8 bits (107), Expect = 7e-06
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 44 NGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 103
+G D E + + E +EEEE+ +GE+E+ ++DE+ E + EDDED+DV+
Sbjct: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEE--EFDEEDDEDEDVE-- 201
Query: 104 KQKTDEDD 111
DEDD
Sbjct: 202 ---GDEDD 206
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 60.8 bits (146), Expect = 2e-10
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAE 84
E +G N ENEE G +E D E DEE EE EE+EE +E DGEEE+ +E+EE E
Sbjct: 184 ETGSSGSSDEQGNNTENEEEGVEE-DVEEDEEVEEDAEEDEEVDE-DGEEEEEEEEEEEE 241
Query: 85 SATGKRAAEDDEDDDVDTKKQKTDED 110
+ E+ E D+ D K++ D D
Sbjct: 242 EE--EEEEEEYEQDERDQKEEGNDYD 265
Score = 58.9 bits (141), Expect = 8e-10
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNE--VDEEEEEGGEEEEEEEEGD 71
++ + KE V E G D + ++E G + E V+E+ EE E EE+ EE +
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 72 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
+EDG+E+EE E + E++E+ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 54.7 bits (130), Expect = 2e-08
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE 66
+ E +D++E +EV E+AE + +G E EE E+E + E +EEE E E +++
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Query: 67 EE--EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
EE + D E D E+ S T D D KK++
Sbjct: 259 EEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE 300
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 78
E+ E E G + + E EE+ E++ + + D EEEE EEEEEEEE + EEE+ +
Sbjct: 193 EQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEE-EEEEEEYE 251
Query: 79 EDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
+DE + +E +D DT+ + +D
Sbjct: 252 QDERDQK---------EEGNDYDTRSEASD 272
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 60.8 bits (146), Expect = 2e-10
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAE 84
E +G N ENEE G +E D E DEE EE EE+EE +E DGEEE+ +E+EE E
Sbjct: 184 ETGSSGSSDEQGNNTENEEEGVEE-DVEEDEEVEEDAEEDEEVDE-DGEEEEEEEEEEEE 241
Query: 85 SATGKRAAEDDEDDDVDTKKQKTDED 110
+ E+ E D+ D K++ D D
Sbjct: 242 EE--EEEEEEYEQDERDQKEEGNDYD 265
Score = 58.9 bits (141), Expect = 8e-10
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNE--VDEEEEEGGEEEEEEEEGD 71
++ + KE V E G D + ++E G + E V+E+ EE E EE+ EE +
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 72 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
+EDG+E+EE E + E++E+ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 54.7 bits (130), Expect = 2e-08
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE 66
+ E +D++E +EV E+AE + +G E EE E+E + E +EEE E E +++
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQK 258
Query: 67 EE--EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
EE + D E D E+ S T D D KK++
Sbjct: 259 EEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE 300
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 78
E+ E E G + + E EE+ E++ + + D EEEE EEEEEEEE + EEE+ +
Sbjct: 193 EQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEE-EEEEEEYE 251
Query: 79 EDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
+DE + +E +D DT+ + +D
Sbjct: 252 QDERDQK---------EEGNDYDTRSEASD 272
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 42 EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVD 101
EE +E + EV+EEE+E EE+EE+EE + +EE+ +EDEE E GK+ E+ ++++D
Sbjct: 119 EEEEVEEEEEEVEEEEKE--EEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEID 176
Query: 102 TKKQKT 107
T+ Q+T
Sbjct: 177 TEIQRT 182
Score = 42.4 bits (98), Expect = 8e-05
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
Query: 12 ITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGD 71
+ ++++E++E VEE E + EE E E + E +EE+EE +EEEEE+EG
Sbjct: 118 VEEEEVEEEEEEVEEEE-----------KEEEKEEDEEEEEKEEEKEE--DEEEEEKEGK 164
Query: 72 GEEEDGDEDE 81
EE+ E+E
Sbjct: 165 KMEEEKVEEE 174
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 62 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEE EEEE + EEE+ +E++E + ++ E +ED++ + K+ K E++
Sbjct: 120 EEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEE 169
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 13/67 (19%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE 66
+ E+ ++ +E+KE EE E E+ E+E D E +E+E + EEE+
Sbjct: 125 EEEEEVEEEEKEEEKEEDEE-------------EEEKEEEKEEDEEEEEKEGKKMEEEKV 171
Query: 67 EEEGDGE 73
EEE D E
Sbjct: 172 EEEIDTE 178
Score = 33.1 bits (74), Expect = 0.049
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 66 EEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEEE + EEE+ +E+E+ E E +ED++ + K+++ +ED+
Sbjct: 119 EEEEVEEEEEEVEEEEKEE--------EKEEDEEEEEKEEEKEEDE 156
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 58 EEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
++G EEEE E EEE+ E+EE E + ED+E+++ + +K++ +E++
Sbjct: 113 QQGLPVEEEEVE---EEEEEVEEEEKE----EEKEEDEEEEEKEEEKEEDEEEE 159
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 60.1 bits (144), Expect = 4e-10
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 17 LKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEED 76
+++++E+ EA ++ +E E E+E+++E DEE EE EEE E+E+ EED
Sbjct: 85 VEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEED 144
Query: 77 GDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
E+ E+E A G+ AE + D +++ + ++
Sbjct: 145 NQEEGESE-AEGETEAESEFDPEIEMEAER 173
Score = 51.2 bits (121), Expect = 2e-07
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 34 PANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAE 93
PA+G +E E + + E + E E G E E EEE EE+ + +EE+E + + + E
Sbjct: 70 PADGEGAGKEEAEVKVEQEREIESEAGEESESEEE--SESEEESETEEESEDESDEESEE 127
Query: 94 DDEDDDVDTKKQKTDEDD 111
D E++ D ++ + +ED+
Sbjct: 128 DSEEEMEDEQESEAEEDN 145
Score = 49.3 bits (116), Expect = 7e-07
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 32 DAPANGNAENEENGEQEADNEVDE-EEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKR 90
D G E E EQE + E + EE E EE E EEE + EEE DE +E +
Sbjct: 72 DGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
ED+++ + + Q+ E +
Sbjct: 132 EMEDEQESEAEEDNQEEGESE 152
Score = 46.2 bits (108), Expect = 6e-06
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
S+A ++ SE E+ E EE+E ++ + E+EE+ E+E ++E + E EE
Sbjct: 93 SEAGEESESE-------EESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Query: 62 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVD 101
+EE E E E + + D E E + A D +D
Sbjct: 146 QEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLD 185
Score = 45.4 bits (106), Expect = 1e-05
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 26 EAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEE----EEEEEEGDGEEEDGDEDE 81
+ E A E E E EA E + EEE EE EEE E+ EE + D +E
Sbjct: 72 DGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
Query: 82 EAESATGKRAAEDDEDDDVDTKKQKTDED 110
E E A ED++++ + +T+ +
Sbjct: 132 EMEDEQESEAEEDNQEEGESEAEGETEAE 160
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 60.1 bits (144), Expect = 4e-10
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG-GEEEEEEEEGDGEEED 76
K ++E EE G + G E E E+E + + +EE EEG GEEE EE EG+GEEE+
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Query: 77 GDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
G E E E G+ E+ E + + + + +E++
Sbjct: 883 G-EGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 916
Score = 60.1 bits (144), Expect = 4e-10
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG----EEEEEEEEGDGEEEDGDE- 79
EE G G E EE GE E + E + EEEE G E E EE EG+GEEE+G+E
Sbjct: 983 EEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEE 1042
Query: 80 ----DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
++E E +R E++E++ + K Q+T E++
Sbjct: 1043 GEEREKEGEGEENRRNREEEEEE--EGKYQETGEEE 1076
Score = 59.7 bits (143), Expect = 5e-10
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEEN-GEQEADNEVDEEEEEGGEEEEEEEEGDGEEED 76
+E+ E E E G + G E E GE+E + E +EEE EG EEE E EG+ EE +
Sbjct: 859 EEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGE 918
Query: 77 GDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
G +EE E G+ E+ E + D + + +E+
Sbjct: 919 GKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 59.7 bits (143), Expect = 5e-10
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDG---EE 74
+E++ E E G G E EE E E + E +E EEEG EE E EEEG+G EE
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEEE-EGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE 1016
Query: 75 EDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E+G+ + E E G+ E++E ++ +++K E +
Sbjct: 1017 EEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGE 1053
Score = 59.3 bits (142), Expect = 6e-10
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNAENEEN-GEQEADNEVDEEEEEGGEEEEEEEE 69
E T+ E+KE E E G G E EE GE E + EEEE GEEEE E +
Sbjct: 798 EEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGK 857
Query: 70 GDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
G+ E E+G+ +EE E G+ E+ E + + + + +E++
Sbjct: 858 GEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Score = 58.2 bits (139), Expect = 1e-09
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQ-------EADNEVDEEEEEG-GEEEE---E 66
+EK E + G + G E +E G + E E +EEEEEG GEEEE E
Sbjct: 784 EEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGE 843
Query: 67 EEEGDGEEEDGD--EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEEG+GEEE+G+ +EE E G+ E+ E + + + + E++
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEE 890
Score = 57.8 bits (138), Expect = 2e-09
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEEN---GEQEADNEVDEEEEEGGEEEEEEEEGDGE- 73
+E++E E E G G E EE GE+E + EEE E GE E EEEEG+GE
Sbjct: 828 EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEG 887
Query: 74 EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
EE+G+ + E E G+ E + + + + + K +E+
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEE 924
Score = 57.4 bits (137), Expect = 2e-09
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 25 EEAENGRDAPANGNAENEEN---GEQEADNEVDEEEEEG-GEEEEEEEEGDGEEEDG--- 77
EE E + G E EE GE+E + E +EEE EG GEEE EE EG+GEEE+G
Sbjct: 881 EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE 940
Query: 78 --DEDEEAESATGKRAAEDDEDD 98
D + E E G+ E++E +
Sbjct: 941 GEDGEGEGEEEEGEWEGEEEEGE 963
Score = 57.0 bits (136), Expect = 3e-09
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDE---EEEEGGEEEEEEEEGDGEEE 75
E +E EE E G G E EE GE E + E E EEE GE EEEE EG GEEE
Sbjct: 866 EGEEEGEEGE-GEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEE 924
Query: 76 DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
+ + E E G+ ED E + + + + E++
Sbjct: 925 GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEE 960
Score = 56.6 bits (135), Expect = 4e-09
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENG----EQEADNEVD--EEEEEGGEEEEEEEEGD 71
++K+E + E G + G E EE E+E EV+ E EE GE EEEEEEG+
Sbjct: 775 RKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGE 834
Query: 72 GEEEDGD-EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GEEE+G+ E+EE E + + +E+ + +++ +E +
Sbjct: 835 GEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGE 875
Score = 56.2 bits (134), Expect = 5e-09
Identities = 27/91 (29%), Positives = 51/91 (56%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG 77
++++E + E ++ G E+ E E+E D E +EE+E G+EE E EE +GE E
Sbjct: 712 QKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKE 771
Query: 78 DEDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
+ + + E GK ++E D + ++++T+
Sbjct: 772 EGERKKEERAGKEEKGEEEGDQGEGEEEETE 802
Score = 56.2 bits (134), Expect = 5e-09
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG-------GEEEEEEEEG 70
+E+ E EE G+ E EE GE E + E +EEE EG GE EEEE EG
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGE-EGEGEGEEEEGEGEGEEEGEGEGEEEEGEG 902
Query: 71 DGEEE-DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
+GEEE +G+ +EE G+ E+ E + + + + ED
Sbjct: 903 EGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED 943
Score = 55.5 bits (132), Expect = 9e-09
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG-GEEEEEEEEGDGEEE-D 76
E++E E E G G + EE GE+ E +EE EEG GE EEEE EG+GEEE +
Sbjct: 836 EEEEGEGEEEEGEGEEEEGEGKGEEEGEE---GEGEEEGEEGEGEGEEEEGEGEGEEEGE 892
Query: 77 GDEDEEAESATGKRAAE-DDEDDDVDTKKQKTDED 110
G+ +EE G+ E + E+++ + K ++ E+
Sbjct: 893 GEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
Score = 55.5 bits (132), Expect = 9e-09
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDE----EEEEGGEEEEEEEEGDGEEEDGDED 80
EE G G E EE GE E + E E EE E GE E EEEEG+GE EDG+ +
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGE 947
Query: 81 EEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E E + E+ E + + + + +E +
Sbjct: 948 GEEEEGEWEGEEEEGEGEGEEEGEGEGEEGE 978
Score = 53.9 bits (128), Expect = 3e-08
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG 77
K ++E E G + G E+ E +E + E + EEEEG E EEE EG+GEE +G
Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG 979
Query: 78 DEDEEAESATGKRAAEDDEDDD 99
+ +EE G+ ++E ++
Sbjct: 980 EGEEEEGEGEGEEEEGEEEGEE 1001
Score = 53.9 bits (128), Expect = 3e-08
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEEN-GEQEADNEVDEEE-EEGGEEEEEEEEGDGEEED 76
E+ E E E G +G E EE GE E + E E E EE GE E EE EG+GEEE+
Sbjct: 926 EEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEE 985
Query: 77 GD---EDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
G+ E+EE E G+ E +E+ + + ++++ E
Sbjct: 986 GEGEGEEEEGEE-EGEEEGEGEEEGEGEGEEEEEGE 1020
Score = 53.5 bits (127), Expect = 4e-08
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG------GEEEEEEEEGDGEEE--- 75
EE G G + EE GE E + E +EEE EG GE EEEE E +GEEE
Sbjct: 905 EEEGEGEGEEEEGEGKGEEEGE-EGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGE 963
Query: 76 -DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
+G+E+ E E G+ E++E + +++ +E +
Sbjct: 964 GEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGE 1000
Score = 53.1 bits (126), Expect = 5e-08
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 20 KKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEE---EEEEGDGEEED 76
+KE+ E+ E + +G + ++ EQ E ++E EEGGEEE EEEEGD EEE+
Sbjct: 693 EKELAEKEEWKK---RDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEE 749
Query: 77 GDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
E E E G+ + E ++ + KK++
Sbjct: 750 EKEGEGKEEGEGEEVEGEREKEEGERKKEE 779
Score = 52.4 bits (124), Expect = 8e-08
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENE-ENGEQEADNEVDE---EEEEG-GEEEE------E 66
+E+ E EE G + G E E E GE E + E E EEEEG GE EE E
Sbjct: 837 EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE 896
Query: 67 EEEGDGE-EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEEG+GE EE+G+ + E E GK E +E + +++ E +
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGE 942
Score = 52.4 bits (124), Expect = 8e-08
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEE------EGD 71
+E+ E E E + G E EE GE E + E +E E EG EEE EEE EG+
Sbjct: 992 EEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGE 1051
Query: 72 GEE--EDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
GEE + +E+EE E + E++E D + K+
Sbjct: 1052 GEENRRNREEEEEEEGKYQETGEEENERQDGEEYKK 1087
Score = 52.0 bits (123), Expect = 1e-07
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAE 84
EE G E EE GE E + E EEE GE E EEEEG+ E E+ E EE
Sbjct: 950 EEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEG 1009
Query: 85 SATGKRAAEDDEDDDVDTKKQKTDEDD 111
G+ E + + +V+ ++ + + ++
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEE 1036
Score = 51.6 bits (122), Expect = 1e-07
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG-EEEEEEEEGDGEEE---DGDED 80
EE E G G E EE + D E + EEEEG E EEEE EG+GEEE +G+E
Sbjct: 923 EEGEEGE-----GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Query: 81 E-EAESATGKRAAEDDEDDDVDTKKQKTDED 110
E E E G+ E++E ++ ++ + +E+
Sbjct: 978 EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Score = 51.2 bits (121), Expect = 2e-07
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEG 70
E+ + KE+ E +E G++ + E E+E + +E+EE G E E EEG
Sbjct: 763 EVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEG 822
Query: 71 DGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
GE E+ +E+ E E G+ E+ E ++ + + + +E +
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGE 863
Score = 48.9 bits (115), Expect = 9e-07
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 25 EEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEE------------------- 65
EE E G G E GE+E + + ++ +G E+E+
Sbjct: 672 EEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGG 731
Query: 66 EEEEGDGEEEDGD-EDEEAESATGKRAAEDDEDDDVDTKKQKTD 108
EEE G+GEEE+GD E+EE + GK E+ E ++V+ +++K +
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGK---EEGEGEEVEGEREKEE 772
Score = 48.9 bits (115), Expect = 9e-07
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 18 KEKKEVVEEA---ENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE- 73
KE+ + +EE E+G G+ E EE E E E + EE EG E+EE E E
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER 780
Query: 74 -------EEDGDEDEEAESATGKRAAEDDEDDDVD 101
EE+GD+ E E T R E +E +V+
Sbjct: 781 AGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVE 815
Score = 48.9 bits (115), Expect = 9e-07
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEE-NGEQEADNEVDEEEEEGGEEEEEEEEGD---GEE 74
E++E E E ++ E EE GE+E + ++EE G+EE+ EEEGD GEE
Sbjct: 739 EEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEE 798
Query: 75 ED----GDEDE--------EAESATGKRAAEDDEDDDVDTKKQKTDED 110
E+ G+E E E E G+R E++E + + + + +E+
Sbjct: 799 EETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEE 846
Score = 48.9 bits (115), Expect = 9e-07
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEE--EEEGGEEEEEEEEGDG--- 72
+E+++ E E G G E EE ++ + EE EEEG + E EEEE +G
Sbjct: 747 EEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGE 806
Query: 73 EEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E+E+G E E E GK E++E++ +++ E++
Sbjct: 807 EKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEE 845
Score = 43.9 bits (102), Expect = 3e-05
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 18 KEKKEVVEEAENGRDAPANGNAENEENGEQ-EADNEVDEEEEEGGE-------------- 62
+E+ E EE E + G E E GE+ E + E +E EEEG E
Sbjct: 1000 EEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNR 1059
Query: 63 EEEEEEEGDGEEEDGDEDEEAESATGKRAAE 93
EEEEEEEG +E +E+E + K+ ++
Sbjct: 1060 EEEEEEEGKYQETGEEENERQDGEEYKKVSK 1090
Score = 27.7 bits (60), Expect = 2.1
Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 23/132 (17%)
Query: 3 DAAVDTSSEIT----TKDLKEKKEVVEEAENGRD---APANGNAENEENGEQEADNEVDE 55
+A +D SS + T D+ ++ N + +P + + GE D + E
Sbjct: 481 EAEIDNSSTVESLGETTDILNMTHIMSLNSNEKSLKLSPVQKQKKQQTIGELTQDTALTE 540
Query: 56 EEEEGGEEEEEE-EEGDGEEE---------------DGDEDEEAESATGKRAAEDDEDDD 99
++ EE E +EG ++ + DEE E K AED + +
Sbjct: 541 NDDSDEYEEMSEMKEGKACKQHVSQGIFMTQPATTIEAFSDEEVEIPEEKEGAEDSKGNG 600
Query: 100 VDTKKQKTDEDD 111
++ ++ + +E++
Sbjct: 601 IEEQEVEANEEN 612
Score = 26.2 bits (56), Expect = 6.0
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 46 EQEADNEVDEEEEEGGEEEEEEEEGDG-EEEDGDEDEEAESATGKRAAEDDEDDDVDTKK 104
E +D EV+ EE+ G E+ +G+G EE++ + +EE G R + + D T K
Sbjct: 577 EAFSDEEVEIPEEKEG---AEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDK 633
Query: 105 QKTDE 109
+ E
Sbjct: 634 AEVSE 638
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 59.7 bits (143), Expect = 5e-10
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 26 EAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---- 81
E + D+ A + ++E ++E ++E D E E+G EEE +EEE + E+ +GD+D+
Sbjct: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
Query: 82 EAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E E G EDDED+D D +++++ + +
Sbjct: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGE 260
Score = 56.2 bits (134), Expect = 5e-09
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEE- 63
A D+ +++ D +K+E EE E+ +D ENE+ E+E D E DE+E+ G++
Sbjct: 175 APDSDAQV---DGVDKEEEDEEGEDEKDX------ENEDGEEEELDEEEDEDEDVEGDDD 225
Query: 64 -----EEEEEEG---DGEEEDGDEDEEAESA----TGKRAAEDDED 97
EEEEE G D ++ED DEDEE E + KR +D+ED
Sbjct: 226 KDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 32.3 bits (72), Expect = 0.084
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENG---EQEADNEVD-EEEEEGGEEEEEEEEG 70
++L E+++ E+ E G D + E EE G +++ ++E + EEEEE G+ E + E
Sbjct: 208 EELDEEEDEDEDVE-GDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRET 266
Query: 71 DGEEEDG 77
D +EEDG
Sbjct: 267 D-DEEDG 272
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 54 DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
D E++E + + + + D EEED +E E+ + + E++ D++ D + +DD
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEED-EEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 59.7 bits (143), Expect = 5e-10
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 26 EAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---- 81
E + D+ A + ++E ++E ++E D E E+G EEE +EEE + E+ +GD+D+
Sbjct: 171 EDQEAPDSDAQVDGVDKEEEDEEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVS 230
Query: 82 EAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E E G EDDED+D D +++++ + +
Sbjct: 231 EEEEEFGLDKDEDDEDEDEDEEEEESGKGE 260
Score = 56.2 bits (134), Expect = 5e-09
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEE- 63
A D+ +++ D +K+E EE E+ +D ENE+ E+E D E DE+E+ G++
Sbjct: 175 APDSDAQV---DGVDKEEEDEEGEDEKDX------ENEDGEEEELDEEEDEDEDVEGDDD 225
Query: 64 -----EEEEEEG---DGEEEDGDEDEEAESA----TGKRAAEDDED 97
EEEEE G D ++ED DEDEE E + KR +D+ED
Sbjct: 226 KDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 32.3 bits (72), Expect = 0.084
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENG---EQEADNEVD-EEEEEGGEEEEEEEEG 70
++L E+++ E+ E G D + E EE G +++ ++E + EEEEE G+ E + E
Sbjct: 208 EELDEEEDEDEDVE-GDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRET 266
Query: 71 DGEEEDG 77
D +EEDG
Sbjct: 267 D-DEEDG 272
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 54 DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
D E++E + + + + D EEED +E E+ + + E++ D++ D + +DD
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEED-EEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 59.7 bits (143), Expect = 5e-10
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 9/94 (9%)
Query: 14 TKDLKEKKEVV-EEAENGRDAPANGNAENEENGEQEADNEVDEEEE---EGGEEEEEEEE 69
T+D+ EK+E EE D P + + E+EE G++E + E++EE+E E GE+ E+EEE
Sbjct: 96 TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEE-GDREEEEEIEEEDEDDDEDGEDVEDEEE 154
Query: 70 GDGEEEDGDEDEEAE----SATGKRAAEDDEDDD 99
+ EEE+ +E+EE E + R +D E DD
Sbjct: 155 EEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDD 188
Score = 55.1 bits (131), Expect = 1e-08
Identities = 24/77 (31%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 35 ANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 94
++G + +E E E + E E+ +E G+E+EE+EEGD EEE+ E+E+ + ED
Sbjct: 93 SDGTEDMDEKEEDEGE-EYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVED 151
Query: 95 DEDDDVDTKKQKTDEDD 111
+E+++ + ++++ +E++
Sbjct: 152 EEEEEEEEEEEEEEEEN 168
Score = 52.8 bits (125), Expect = 6e-08
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 17 LKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEED 76
+K V+E ++ E +E E DN+ +E+E EE + EEE + EEED
Sbjct: 80 VKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEED 139
Query: 77 GDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
D+DE+ E + E++E+++ + ++++ +ED
Sbjct: 140 EDDDEDGEDVEDE---EEEEEEEEEEEEEEENED 170
Score = 52.0 bits (123), Expect = 1e-07
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 42 EENGEQEADNEVDEEEEEGGEE--EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDED-D 98
+E + + ++DE+EE+ GEE E+ +E GD +EED + D E E + +DDED +
Sbjct: 88 DECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGE 147
Query: 99 DVDTKKQKTDEDD 111
DV+ ++++ +E++
Sbjct: 148 DVEDEEEEEEEEE 160
Score = 45.1 bits (105), Expect = 1e-05
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
M + D E + + + E E+ E R+ E+E++ E D E +EEEEE
Sbjct: 99 MDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEE 158
Query: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EEEEEEEE +ED + + + ++DD+ + + DE
Sbjct: 159 EEEEEEEEE--------NEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDE 199
Score = 42.7 bits (99), Expect = 6e-05
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 51 NEVDEEEEEGGEEEEEE-EEGDGEE------EDGDEDEEAESA---TGKRAAEDDEDDDV 100
+ VDE ++ G E+ +E EE +GEE E GDEDEE E + E+DEDDD
Sbjct: 85 SSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDE 144
Query: 101 DTKKQKTDEDD 111
D + + +E++
Sbjct: 145 DGEDVEDEEEE 155
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRD--APANGNAENEENGEQEADNEVDEEEEE 59
+D D E D +E++E+ EE E+ + E EE E+E + E +E+ +
Sbjct: 114 NDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQM 173
Query: 60 GGEEEEEEEEGDGEEEDGDEDEEAESATGK 89
++ + ++ + DE + + K
Sbjct: 174 NCHNTRIMQDTEKDDNNNDEYDNYDELVAK 203
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 58.9 bits (141), Expect = 8e-10
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 8 TSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEE 67
T I + D +E++E EE E + + E EE E+E E +EEEEE EEE EE
Sbjct: 879 TVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEF-EEEFEE 937
Query: 68 EEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EEG+ EEE+ +EDEE E E+ ED + T + +E
Sbjct: 938 EEGELEEEEEEEDEEEE-----EELEEVEDLEFGTAGGEVEE 974
Score = 57.4 bits (137), Expect = 2e-09
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 36 NGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE---DEEAESATGKRAA 92
+ + E EE E+E + E +EEEEE EEEEE+EE EEE+ +E +EE E G+
Sbjct: 885 SSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEE 944
Query: 93 EDDEDDDVDTKKQKTDED 110
E++E+D+ + ++ + ED
Sbjct: 945 EEEEEDEEEEEELEEVED 962
Score = 53.5 bits (127), Expect = 4e-08
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 6 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENE---ENGEQEADNEVDEEEEEGGE 62
+++S E ++ +E++E EE E D E E E E+E + E + EEEEG
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Query: 63 EEEEEEEGDGEEEDGDEDEEAESATGKRAAED 94
EEEEEEE + EEE+ +E E+ E T E+
Sbjct: 943 EEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 53.5 bits (127), Expect = 4e-08
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 44 NGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 103
N E + E +EEEEE EEEEEEE+ + EEED +E E E + E+ E+++ + +
Sbjct: 884 NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELE 943
Query: 104 KQKTDEDD 111
+++ +ED+
Sbjct: 944 EEEEEEDE 951
Score = 50.1 bits (118), Expect = 4e-07
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 41 NEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV 100
N + E+E + E +EEEEE EEEE+ EE + +EE+ E+EE E + E++E +
Sbjct: 884 NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELE 943
Query: 101 DTKKQKTDEDD 111
+ ++++ +E++
Sbjct: 944 EEEEEEDEEEE 954
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE 66
+ E +D +E++E EE + E E E E + E +EE+EE EE EE
Sbjct: 900 EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEE 959
Query: 67 EEE-----GDGEEEDG 77
E+ GE E+G
Sbjct: 960 VEDLEFGTAGGEVEEG 975
Score = 30.0 bits (66), Expect = 0.42
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 3 DAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGE 62
+ DT+ + + L + EV E E+ P EE A + EEE E G
Sbjct: 1017 ERGADTAPTLAPEALPSQGEVEREGESPAAGPPPQELVEEE---PSAPPTLLEEETEDGS 1073
Query: 63 EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 99
++ + EE+ + + EAE A ++ E DD
Sbjct: 1074 DKVQPPPETPAEEEMETETEAE------ALQEKEQDD 1104
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 58.5 bits (140), Expect = 1e-09
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDA----------PANGNA---ENEENGEQ 47
M +A + E+ +EKKE EE E +A P A + EE ++
Sbjct: 469 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 528
Query: 48 EADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKT 107
E + + +EEEE+ G + ++ EEG E+E E EE E G+ AE E ++ + K++K
Sbjct: 529 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEAKEEKK 587
Query: 108 DED 110
E+
Sbjct: 588 VEE 590
Score = 43.1 bits (100), Expect = 5e-05
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE-------- 66
+++ E+ +V +E +A E + ++E +E+EEE EEEE
Sbjct: 454 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 513
Query: 67 --------EEEGDGEEEDG--DEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEEG+ EEE+G +E+EE E A +A E + + ++K++ ++++
Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEE 568
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/106 (23%), Positives = 45/106 (42%)
Query: 4 AAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEE 63
AA + + T ++KE++ EE E + + E+ + E+E GE+
Sbjct: 507 AAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQ 566
Query: 64 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EE E E + E E+ + EE + E+ D K +K ++
Sbjct: 567 EEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 612
Score = 35.4 bits (80), Expect = 0.010
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 18 KEKKEVVEEA---ENGRDAPANGNAENE--ENGEQEADNEVDEEEEEGGEEEEEEE---- 68
KEK++ E E G D A G+ + + NGE E EV++E +E G EEE+
Sbjct: 772 KEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVT 831
Query: 69 -----EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 103
E++ GD+ EE T E D TK
Sbjct: 832 NGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATK 871
Score = 33.9 bits (76), Expect = 0.029
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADN---------EVDEEEEEGG 61
E K+ ++++V ++ E +D P AE+ E A+ +++E +E G
Sbjct: 706 EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEG 765
Query: 62 E--EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
+ ++E+E+E G E +E+ + A G R + + +V+ K++ E
Sbjct: 766 KPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQE 815
Score = 33.5 bits (75), Expect = 0.038
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE 73
TK EK E+ E + A E ++ +E + E + EEEE ++ + E
Sbjct: 460 TKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE 519
Query: 74 --EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EE+G+++EE E++E++D K + +E
Sbjct: 520 VKEEEGEKEEE-------EGQEEEEEEDEGAKSDQAEE 550
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 74
K+ KE+ + +++ + A G +E E + + + ++ G E +EE E + +E
Sbjct: 759 KETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE 818
Query: 75 E-DGDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
+ G E+E+ G + DE D ++K
Sbjct: 819 KGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 851
Score = 30.0 bits (66), Expect = 0.42
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
SD A + SE K+ +KE E+ E +A A G E E + + +V+E+ EE
Sbjct: 545 SDQAEEGGSE---KEGSSEKEEGEQEEGETEAEAEG-----EEAEAKEEKKVEEKSEEVA 596
Query: 62 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 94
+EE + E + E+A+S K E+
Sbjct: 597 TKEELVADAKVE-----KPEKAKSPVPKSPVEE 624
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 46 EQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
E++A + V + E E + + E G GE+++ +E++E + A + E E+ D ++
Sbjct: 675 EEKAKSPVPKSPVE--EAKSKAEVGKGEQKE-EEEKEVKEAPKEEKVEKKEEKPKDVPEK 731
Query: 106 KTDE 109
K E
Sbjct: 732 KKAE 735
Score = 26.6 bits (57), Expect = 4.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 20 KKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD- 78
K V E+A++ P + E + E + +EEE+E E +EE+ EE+ D
Sbjct: 671 KSPVEEKAKS--PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDV 728
Query: 79 -EDEEAESATGKRAAED 94
E ++AES + A +
Sbjct: 729 PEKKKAESPVKEEAVAE 745
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 58.5 bits (140), Expect = 1e-09
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDA----------PANGNA---ENEENGEQ 47
M +A + E+ +EKKE EE E +A P A + EE ++
Sbjct: 93 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 152
Query: 48 EADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKT 107
E + + +EEEE+ G + ++ EEG E+E E EE E G+ AE E ++ + K++K
Sbjct: 153 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEAKEEKK 211
Query: 108 DED 110
E+
Sbjct: 212 VEE 214
Score = 43.1 bits (100), Expect = 5e-05
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE-------- 66
+++ E+ +V +E +A E + ++E +E+EEE EEEE
Sbjct: 78 EEIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPV 137
Query: 67 --------EEEGDGEEEDG--DEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
EEEG+ EEE+G +E+EE E A +A E + + ++K++ ++++
Sbjct: 138 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEE 192
Score = 42.7 bits (99), Expect = 6e-05
Identities = 25/106 (23%), Positives = 45/106 (42%)
Query: 4 AAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEE 63
AA + + T ++KE++ EE E + + E+ + E+E GE+
Sbjct: 131 AAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQ 190
Query: 64 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EE E E + E E+ + EE + E+ D K +K ++
Sbjct: 191 EEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 236
Score = 35.4 bits (80), Expect = 0.010
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 14/100 (14%)
Query: 18 KEKKEVVEEA---ENGRDAPANGNAENE--ENGEQEADNEVDEEEEEGGEEEEEEE---- 68
KEK++ E E G D A G+ + + NGE E EV++E +E G EEE+
Sbjct: 396 KEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKEKGSGREEEKGVVT 455
Query: 69 -----EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 103
E++ GD+ EE T E D TK
Sbjct: 456 NGLDLSPADEKKGGDKSEEKVVVTKTVEKITSEGGDGATK 495
Score = 33.9 bits (76), Expect = 0.029
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADN---------EVDEEEEEGG 61
E K+ ++++V ++ E +D P AE+ E A+ +++E +E G
Sbjct: 330 EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVTITKSVKVHLEKETKEEG 389
Query: 62 E--EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
+ ++E+E+E G E +E+ + A G R + + +V+ K++ E
Sbjct: 390 KPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQE 439
Score = 33.5 bits (75), Expect = 0.038
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE 73
TK EK E+ E + A E ++ +E + E + EEEE ++ + E
Sbjct: 84 TKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE 143
Query: 74 --EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 109
EE+G+++EE E++E++D K + +E
Sbjct: 144 VKEEEGEKEEE-------EGQEEEEEEDEGAKSDQAEE 174
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 74
K+ KE+ + +++ + A G +E E + + + ++ G E +EE E + +E
Sbjct: 383 KETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE 442
Query: 75 E-DGDEDEEAESATGKRAAEDDEDDDVDTKKQK 106
+ G E+E+ G + DE D ++K
Sbjct: 443 KGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 475
Score = 30.0 bits (66), Expect = 0.42
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
SD A + SE K+ +KE E+ E +A A G E E + + +V+E+ EE
Sbjct: 169 SDQAEEGGSE---KEGSSEKEEGEQEEGETEAEAEG-----EEAEAKEEKKVEEKSEEVA 220
Query: 62 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 94
+EE + E + E+A+S K E+
Sbjct: 221 TKEELVADAKVE-----KPEKAKSPVPKSPVEE 248
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 46 EQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
E++A + V + E E + + E G GE+++ +E++E + A + E E+ D ++
Sbjct: 299 EEKAKSPVPKSPVE--EAKSKAEVGKGEQKE-EEEKEVKEAPKEEKVEKKEEKPKDVPEK 355
Query: 106 KTDE 109
K E
Sbjct: 356 KKAE 359
Score = 26.6 bits (57), Expect = 4.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 20 KKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD- 78
K V E+A++ P + E + E + +EEE+E E +EE+ EE+ D
Sbjct: 295 KSPVEEKAKS--PVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDV 352
Query: 79 -EDEEAESATGKRAAED 94
E ++AES + A +
Sbjct: 353 PEKKKAESPVKEEAVAE 369
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 57.8 bits (138), Expect = 2e-09
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 20 KKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 79
K V + G PA G A+N +N ++E + DEEE++ EE+EE++E + E+ED E
Sbjct: 116 KALVATPGKKGAAIPAKG-AKNGKNAKKE---DSDEEEDDDSEEDEEDDEDEDEDEDEIE 171
Query: 80 DEEAESATGKRAAED-DEDDDVDTKKQKTDEDD 111
++A A+ED D++DD D + DE+D
Sbjct: 172 PAAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Score = 56.2 bits (134), Expect = 5e-09
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 42/126 (33%)
Query: 27 AENGRDAPANGNAENEENGEQEADNEVDEEEEE-----------------GGEEEEEEEE 69
A+NG++A +++ EE+ + E D E DE+E+E E+E++E++
Sbjct: 134 AKNGKNAKKE-DSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDD 192
Query: 70 GDGEEEDGDEDEEAES-------ATGKRAA-----------------EDDEDDDVDTKKQ 105
D E++D DE++++E A GK+AA EDDED+D D +
Sbjct: 193 EDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDED 252
Query: 106 KTDEDD 111
D+DD
Sbjct: 253 DEDDDD 258
Score = 53.1 bits (126), Expect = 5e-08
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGR-DAPANGNAENEENGEQEADNEVDEEEEEG 60
SD D SE +D +++ E +E E A A A +E+ E + D+E D+++EE
Sbjct: 145 SDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Query: 61 GEEEEEEE-----------------EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 103
EEE E + E+ED +ED+E E EDD+D+D + +
Sbjct: 205 DSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEE 264
Query: 104 KQKTDED 110
+++ +E+
Sbjct: 265 EEEEEEE 271
Score = 51.2 bits (121), Expect = 2e-07
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGN---------AENEENGEQEADNEVDEEE 57
D + +D + +E E E PA G A+N E E +++ DE++
Sbjct: 188 DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD 247
Query: 58 EEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV-DTKKQKTD 108
++ ++E++++E D EEE+ +E+E + A GKR E + + KKQK +
Sbjct: 248 DDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVE 299
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 21 KEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDED 80
K V E+ + D + + +++++ + E D++ D+EEEE EEEE +E G+ +
Sbjct: 230 KNVAEDEDEEED---DEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAK 286
Query: 81 EEAESATGKRAAEDDE 96
++A K+ E E
Sbjct: 287 QKAAPEAKKQKVEGTE 302
Score = 29.3 bits (64), Expect = 0.71
Identities = 14/80 (17%), Positives = 40/80 (50%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEE 68
++++ K E +E E+ D + + ++E++ +++ + E +EEEEE +E +
Sbjct: 221 AAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKR 280
Query: 69 EGDGEEEDGDEDEEAESATG 88
+ + ++ + + + G
Sbjct: 281 KKEMAKQKAAPEAKKQKVEG 300
Score = 26.2 bits (56), Expect = 6.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 45 GEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEA--ESATGKRAA 92
G+ + D + + EE+ E+EE +EED EE GK+AA
Sbjct: 8 GKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAA 57
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 57.0 bits (136), Expect = 3e-09
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 26 EAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAES 85
EA G A + GE+E + E +EEEEEG E EEEEEEG+ EEE+G E EE
Sbjct: 386 EAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEG-EGEEEEEEGEEEEEEGGEGEEL-- 442
Query: 86 ATGKRAAEDDEDDDVDTKKQKTDEDD 111
E +E+ DVD+ +++ ++++
Sbjct: 443 ---GEEEEVEEEGDVDSDEEEEEDEE 465
Score = 55.1 bits (131), Expect = 1e-08
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEE 68
++ ITT E +E EE E + G E EE E+E E E EE GEEEE EE
Sbjct: 394 NATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEE---EEGGEGEELGEEEEVEE 450
Query: 69 EGDGEEEDGDEDEEAESATGKRAAE 93
EGD + ++ +E++E S+ G A +
Sbjct: 451 EGDVDSDEEEEEDEESSSEGLEAED 475
Score = 52.4 bits (124), Expect = 8e-08
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 40 ENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 99
E EE E+E + E +EEEEEG EEEEEEG EE G+E+E E G ++++E++D
Sbjct: 409 EEEEEEEEEEEGEGEEEEEEG---EEEEEEGGEGEELGEEEEVEEE--GDVDSDEEEEED 463
Query: 100 VDTKKQKTDEDD 111
++ + + +D
Sbjct: 464 EESSSEGLEAED 475
Score = 49.7 bits (117), Expect = 5e-07
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 40/146 (27%)
Query: 3 DAAVDTSSEITTKDLKEKKEVVEEAEN-GRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
+A + TS + ++ +E++E EE E G + G E EE GE E E +E EEEG
Sbjct: 394 NATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEG- 452
Query: 62 EEEEEEEEGDGEEE--------------------------------------DGDEDEEA 83
+ + +EEE + EE +G ED ++
Sbjct: 453 DVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDS 512
Query: 84 ESATGKRAAEDDEDDDVDTKKQKTDE 109
+S EDDED+D D ++ DE
Sbjct: 513 DSEEEDDEEEDDEDEDDDDDEEDGDE 538
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 56.6 bits (135), Expect = 4e-09
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 40 ENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 99
E+EE QE D+ E+E+ ++EEEEEE D EED ED+E E E DEDDD
Sbjct: 2410 EDEEEHTQEEDSSGSNEDEDDSQDEEEEEEED--EEDDQEDDEGE--------EGDEDDD 2459
Query: 100 VDTKKQKTDED 110
D + + DED
Sbjct: 2460 DDGSEMELDED 2470
Score = 50.4 bits (119), Expect = 3e-07
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 32 DAPAN-GNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKR 90
+AP+N A + +++ N +D E+EE +EE+ G E+ED +DEE E
Sbjct: 2385 EAPSNLSQASTLQANREDSMNILDPEDEEE-HTQEEDSSGSNEDEDDSQDEEEEEE---- 2439
Query: 91 AAEDDEDDDVDTKKQKTDEDD 111
ED+EDD D + ++ DEDD
Sbjct: 2440 --EDEEDDQEDDEGEEGDEDD 2458
Score = 45.8 bits (107), Expect = 7e-06
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
+ D A S+ +T L+ +E + D + E+ ++ D+ DEEEEE
Sbjct: 2382 LMDEAPSNLSQAST--LQANREDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEE 2439
Query: 61 GEEEEEEEEGDGEEEDGDEDEE 82
+EE+++E+ +GEE D D+D++
Sbjct: 2440 EDEEDDQEDDEGEEGDEDDDDD 2461
Score = 45.4 bits (106), Expect = 1e-05
Identities = 24/86 (27%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 16 DLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEE 75
D ++++E +E ++ ++++EE E+E ++E D++E++ GEE +E+++ DG E
Sbjct: 2408 DPEDEEEHTQEEDSSGSNEDEDDSQDEE--EEEEEDEEDDQEDDEGEEGDEDDDDDGSEM 2465
Query: 76 DGDED-EEAESATGKRAAEDDEDDDV 100
+ DED + ++ R D +DD+
Sbjct: 2466 ELDEDYPDMNASPLVRFERFDREDDL 2491
Score = 32.3 bits (72), Expect = 0.084
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE---- 74
E +++++E N +GE E+ +V +E + + + E+
Sbjct: 2347 ELEDLIDELLERDGGSGNSTIIVSRSGEDESQEDVLMDEAPSNLSQASTLQANREDSMNI 2406
Query: 75 ---EDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
ED +E + E ++G EDD D+ + +++ DE+D
Sbjct: 2407 LDPEDEEEHTQEEDSSGSNEDEDDSQDEEE--EEEEDEED 2444
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/77 (16%), Positives = 36/77 (46%)
Query: 27 AENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESA 86
++N + A G +++ + +Q+ + E +E + + E DG+ DG+ + ++
Sbjct: 2271 SKNKSEQDAQGASQDSSSNQQDPGEPGEAEVQEEDHDVTQTEVADGDIMDGEAETDSVVI 2330
Query: 87 TGKRAAEDDEDDDVDTK 103
G+ ++ V+ +
Sbjct: 2331 AGQPEVLSSQEMQVENE 2347
Score = 26.9 bits (58), Expect = 3.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 30 GRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDED 80
G+D P + AE+ E EEEE E++EEEE E+ D D
Sbjct: 1384 GQDIPMDQRAESPEEVACRK-----EEEERKAREKQEEEEAKCLEKFQDAD 1429
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 56.2 bits (134), Expect = 5e-09
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 19 EKKEVVE--EAENGRDAP-ANGNAENEENGEQEADNEVDEEEEEGGEEEEE---EEEGDG 72
E +E +E +AE +D P + G AE EE ++EA+ E EEEE +EE E EEE G
Sbjct: 453 EVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGG 512
Query: 73 EEEDGDEDEEAESATGKRAAEDDE 96
E E+G+E +EAE K +E
Sbjct: 513 EGEEGEETKEAEEEEKKVEGAGEE 536
Score = 41.2 bits (95), Expect = 2e-04
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 3 DAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG-G 61
+ ++ + KD + EE E ++ A EE +E E EEEE G G
Sbjct: 455 EETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEEEEGGEG 514
Query: 62 EEEEEEEEGDGEEEDGDEDEEAESATGK 89
EE EE +E + EE+ + E ++A K
Sbjct: 515 EEGEETKEAEEEEKKVEGAGEEQAAKKK 542
Score = 38.9 bits (89), Expect = 9e-04
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEE--EEEGD 71
T ++E++ VEE A A++E E EA+ +EE+++ EEEE EEE
Sbjct: 444 TSHVQEEQIEVEETIEAAKAE---EAKDEPPSEGEAE---EEEKDKEEAEEEEAAEEEEA 497
Query: 72 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
+EE + EE E G+ E E ++ + K + E+
Sbjct: 498 AKEESEEAKEEEEGGEGEEGEETKEAEEEEKKVEGAGEE 536
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 55.8 bits (133), Expect = 7e-09
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG----EEEEEEEEG 70
+DL + + ++E + + +AE+ E+E + E +EEEEEG EEEEEEE
Sbjct: 248 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEE-EEEEEEGSTSEESEEEEEEEE 306
Query: 71 DGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
+ EEE G EEA + + +E++ +D + + +
Sbjct: 307 EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 341
Score = 52.4 bits (124), Expect = 8e-08
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 78
E+++++ + ++ D+ ++ + E + +E +EEEEE EEEEE + EE+ +
Sbjct: 246 EERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEE--EEEEEGSTSEESEEEEE 303
Query: 79 EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E+EE E TG + E E + +++ ED+
Sbjct: 304 EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 336
Score = 43.9 bits (102), Expect = 3e-05
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
+ +A +S+E + +E++E EE E G + +EE+ E+E + E EEEEE G
Sbjct: 264 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEE--EEEEETG 313
Query: 62 EEEEEEEEGDGE---EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
EE E E EE+ EDEE E+ + D + ++ +E+
Sbjct: 314 SNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 365
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 20/78 (25%)
Query: 13 TTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEE------------- 59
T+++ +E++E EE E + +N +E++ E+ ++ E+ E+EE
Sbjct: 294 TSEESEEEEE--EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 351
Query: 60 -----GGEEEEEEEEGDG 72
G EE EEE G+G
Sbjct: 352 FDRDSGESEEAEEEVGEG 369
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 55.8 bits (133), Expect = 7e-09
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG----EEEEEEEEG 70
+DL + + ++E + + +AE+ E+E + E +EEEEEG EEEEEEE
Sbjct: 258 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEE-EEEEEEGSTSEESEEEEEEEE 316
Query: 71 DGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
+ EEE G EEA + + +E++ +D + + +
Sbjct: 317 EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 351
Score = 52.4 bits (124), Expect = 8e-08
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 78
E+++++ + ++ D+ ++ + E + +E +EEEEE EEEEE + EE+ +
Sbjct: 256 EERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEE--EEEEEGSTSEESEEEEE 313
Query: 79 EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E+EE E TG + E E + +++ ED+
Sbjct: 314 EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
Score = 43.9 bits (102), Expect = 3e-05
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
+ +A +S+E + +E++E EE E G + +EE+ E+E + E EEEEE G
Sbjct: 274 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEE--EEEEETG 323
Query: 62 EEEEEEEEGDGE---EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
EE E E EE+ EDEE E+ + D + ++ +E+
Sbjct: 324 SNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 375
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 20/78 (25%)
Query: 13 TTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEE------------- 59
T+++ +E++E EE E + +N +E++ E+ ++ E+ E+EE
Sbjct: 304 TSEESEEEEE--EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 361
Query: 60 -----GGEEEEEEEEGDG 72
G EE EEE G+G
Sbjct: 362 FDRDSGESEEAEEEVGEG 379
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 55.8 bits (133), Expect = 7e-09
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG----EEEEEEEEG 70
+DL + + ++E + + +AE+ E+E + E +EEEEEG EEEEEEE
Sbjct: 249 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEE-EEEEEEGSTSEESEEEEEEEE 307
Query: 71 DGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 105
+ EEE G EEA + + +E++ +D + + +
Sbjct: 308 EEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 342
Score = 52.4 bits (124), Expect = 8e-08
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 19 EKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 78
E+++++ + ++ D+ ++ + E + +E +EEEEE EEEEE + EE+ +
Sbjct: 247 EERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEE--EEEEEGSTSEESEEEEE 304
Query: 79 EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
E+EE E TG + E E + +++ ED+
Sbjct: 305 EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 337
Score = 43.9 bits (102), Expect = 3e-05
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGG 61
+ +A +S+E + +E++E EE E G + +EE+ E+E + E EEEEE G
Sbjct: 265 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEE--EEEEETG 314
Query: 62 EEEEEEEEGDGE---EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 110
EE E E EE+ EDEE E+ + D + ++ +E+
Sbjct: 315 SNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 366
Score = 33.5 bits (75), Expect = 0.038
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 20/78 (25%)
Query: 13 TTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEE------------- 59
T+++ +E++E EE E + +N +E++ E+ ++ E+ E+EE
Sbjct: 295 TSEESEEEEE--EEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESR 352
Query: 60 -----GGEEEEEEEEGDG 72
G EE EEE G+G
Sbjct: 353 FDRDSGESEEAEEEVGEG 370
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.284 0.115 0.283
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,435,474
Number of Sequences: 37866
Number of extensions: 379425
Number of successful extensions: 30710
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 2199
Number of HSP's gapped (non-prelim): 11942
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 18 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 46 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.