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Search of human proteins with 151101404
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
(110 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens] 221 7e-59
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 217 2e-57
gi|169217548 PREDICTED: hypothetical protein [Homo sapiens] 199 3e-52
gi|239752637 PREDICTED: hypothetical protein [Homo sapiens] 199 3e-52
gi|113420837 PREDICTED: hypothetical protein [Homo sapiens] 199 3e-52
gi|113420848 PREDICTED: hypothetical protein [Homo sapiens] 198 7e-52
gi|46276863 parathymosin [Homo sapiens] 82 7e-17
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 63 4e-11
gi|115529449 upstream binding transcription factor, RNA polymera... 61 2e-10
gi|115529451 upstream binding transcription factor, RNA polymera... 61 2e-10
gi|7657671 upstream binding transcription factor, RNA polymerase... 61 2e-10
gi|55956788 nucleolin [Homo sapiens] 60 3e-10
gi|169210053 PREDICTED: hypothetical protein [Homo sapiens] 60 3e-10
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 59 6e-10
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 59 1e-09
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 59 1e-09
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 58 1e-09
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 58 1e-09
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 58 1e-09
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 58 1e-09
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 58 1e-09
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 58 2e-09
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 58 2e-09
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 58 2e-09
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 58 2e-09
>gi|151101404 prothymosin, alpha isoform 2 [Homo sapiens]
Length = 110
Score = 221 bits (564), Expect = 7e-59
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD
Sbjct: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 217 bits (552), Expect = 2e-57
Identities = 110/111 (99%), Positives = 110/111 (99%), Gaps = 1/111 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNA-NEENGEQEADNEVDEEEEEG 59
MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNA NEENGEQEADNEVDEEEEEG
Sbjct: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEG 60
Query: 60 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD
Sbjct: 61 GEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 111
>gi|169217548 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 199 bits (507), Expect = 3e-52
Identities = 101/110 (91%), Positives = 105/110 (95%), Gaps = 1/110 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNANEENGEQEADNEVDEE EE G
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 EEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|239752637 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 199 bits (507), Expect = 3e-52
Identities = 101/110 (91%), Positives = 105/110 (95%), Gaps = 1/110 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNANEENGEQEADNEVDEE EE G
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 EEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 199 bits (507), Expect = 3e-52
Identities = 101/110 (91%), Positives = 105/110 (95%), Gaps = 1/110 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MSDAAVDTSSEI KDLKEKKEVV++AENGRDAPANGNANEENGEQEADNEVDEE EE G
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKDAENGRDAPANGNANEENGEQEADNEVDEEGEESG 60
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 EEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|113420848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 198 bits (504), Expect = 7e-52
Identities = 101/110 (91%), Positives = 104/110 (94%), Gaps = 1/110 (0%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MSDAAVDTSSEI KDLKEKKEVV+EAENGRDAPANGNANEENGEQEAD EVDEE EE G
Sbjct: 1 MSDAAVDTSSEIIAKDLKEKKEVVKEAENGRDAPANGNANEENGEQEADKEVDEEGEESG 60
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEE+EGDGEEEDGDE EEAESATGKRAAEDDEDDDVDTKKQKTD+DD
Sbjct: 61 EEEEEEKEGDGEEEDGDE-EEAESATGKRAAEDDEDDDVDTKKQKTDKDD 109
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 82.4 bits (202), Expect = 7e-17
Identities = 47/107 (43%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG 60
MS+ +V+ ++E++ KDLKEKKE VEE + ++ EENG +EEEEE
Sbjct: 1 MSEKSVEAAAELSAKDLKEKKEKVEEKASRKERKKEVVEEEENG-------AEEEEEETA 53
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
E+ EEE+EG+ EE++ +E+E+ E KRAAE E+D+ D K+QKT+
Sbjct: 54 EDGEEEDEGE-EEDEEEEEEDDEGPALKRAAE--EEDEADPKRQKTE 97
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 63.2 bits (152), Expect = 4e-11
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGD 70
E T+ E+KE E E G G EE E E + E E EEE GE EEEE EG
Sbjct: 798 EEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGK 857
Query: 71 GEE--EDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
GEE E+G+ +EE E G+ E+ E + + + + +E++
Sbjct: 858 GEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Score = 62.4 bits (150), Expect = 8e-11
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGD 77
+E+ E E E G + G E GE E + E + EEEEG E EEE EG+GEEE+G+
Sbjct: 859 EEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGE 918
Query: 78 --EDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
+EE E G+ E+ E + D + + +E+
Sbjct: 919 GKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 60.1 bits (144), Expect = 4e-10
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 25 EEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDG---EEEDGDEDEE 81
EE G G EE GE E + E E EEEG EE E EEEG+G EEE+G+ + E
Sbjct: 967 EEEGEGEGEEGEGEGEEEEGEGEGEEE--EGEEEGEEEGEGEEEGEGEGEEEEEGEVEGE 1024
Query: 82 AESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E G+ E++E ++ +++K E +
Sbjct: 1025 VEGEEGEGEGEEEEGEEEGEEREKEGEGE 1053
Score = 60.1 bits (144), Expect = 4e-10
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 20/104 (19%)
Query: 25 EEAEN-GRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEE------------EGDG 71
EE E G + G EE GE+E + E + EEE GE EEEEE EG+G
Sbjct: 975 EEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEG 1034
Query: 72 EEEDGDE-----DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEE+G+E ++E E +R E++E++ + K Q+T E++
Sbjct: 1035 EEEEGEEEGEEREKEGEGEENRRNREEEEEE--EGKYQETGEEE 1076
Score = 55.8 bits (133), Expect = 7e-09
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE-EEDG 76
K ++E EE G + G E GE+E EEE E GE EEE EEG+GE EE+
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Query: 77 DEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E E E G+ E+ E + + + + +E++
Sbjct: 883 GEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEE 916
Score = 55.8 bits (133), Expect = 7e-09
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEG--GEEEEEEEEGDGE-EE 74
+E+ E EE G + G E G+ E + E E EEEG GE E EEEEG+GE EE
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEE 889
Query: 75 DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
+G+ + E E G+ E + + + + + K +E+
Sbjct: 890 EGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEE 924
Score = 55.5 bits (132), Expect = 9e-09
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE--------- 61
E+ + KE+ E +E G++ ++ GE+E EE+EEGGE
Sbjct: 763 EVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEG 822
Query: 62 ---EEEEEEEGDGEEEDGD-EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEEEEG+GEEE+G+ E+EE E + + +E+ + +++ +E +
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGE 875
Score = 55.5 bits (132), Expect = 9e-09
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEG---GEEEEEEEEGDGEEED 75
E +E E E + G E GE E + E + EEEEG GEEE EE EG+GEEE+
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEE 936
Query: 76 G-----DEDEEAESATGKRAAEDDEDD 97
G D + E E G+ E++E +
Sbjct: 937 GEGEGEDGEGEGEEEEGEWEGEEEEGE 963
Score = 55.5 bits (132), Expect = 9e-09
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 25 EEAENGRDAPANGNANEENGEQEADNEVDEEE-EEGGEEEEEEEEGDGEEEDGD---EDE 80
EE G G EE GE E + E E E EE GE E EE EG+GEEE+G+ E+E
Sbjct: 934 EEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEE 993
Query: 81 EAESATGKRAAEDDEDDDVDTKKQKTDE 108
E E G+ E +E+ + + ++++ E
Sbjct: 994 EGEE-EGEEEGEGEEEGEGEGEEEEEGE 1020
Score = 55.1 bits (131), Expect = 1e-08
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEE-----EEEEGDGEE 73
++ E EE GR E GE E EEEEE GE EE EEEEG+GEE
Sbjct: 792 DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEE 851
Query: 74 EDGD--EDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E+G+ +EE E G+ E+ E + + + + E++
Sbjct: 852 EEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEE 890
Score = 53.1 bits (126), Expect = 5e-08
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGD 70
E+ K+ +K++ E+ + R+ N+E E + + EEEEG EEEEE+EG+
Sbjct: 695 ELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGE 754
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
G+EE E EE E K E +++ +++ +E D
Sbjct: 755 GKEE--GEGEEVEGEREKEEGERKKEERAGKEEKGEEEGD 792
Score = 53.1 bits (126), Expect = 5e-08
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEAD-----NEVDEEEEEGGEEEEEEEEGDGE 72
+E+++ E E G G +E GE++ + E EEE + GE EEEE EG GE
Sbjct: 747 EEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGE 806
Query: 73 E-EDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E E+G E E E GK E++E++ +++ E++
Sbjct: 807 EKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEE 845
Score = 52.8 bits (125), Expect = 6e-08
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 20 KKEVVEEAE-NGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEE---EEEEGDGEEED 75
+KE+ E+ E RD E G Q+ N+ E EEGGEEE EEEEGD EEE+
Sbjct: 693 EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQ---EMEEGGEEEHGEGEEEEGDREEEE 749
Query: 76 GDEDEEAESATGKRAAEDDEDDDVDTKKQK 105
E E E G+ + E ++ + KK++
Sbjct: 750 EKEGEGKEEGEGEEVEGEREKEEGERKKEE 779
Score = 52.8 bits (125), Expect = 6e-08
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENG---EQEADNEVDEEEEEGGEEEEEEEEGDGEEE 74
+E+KE + + R+ EE+G E+E D E +EE+E G+EE E EE +GE E
Sbjct: 710 QEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGERE 769
Query: 75 DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
+ + + E GK ++E D + ++++T+
Sbjct: 770 KEEGERKKEERAGKEEKGEEEGDQGEGEEEETE 802
Score = 52.4 bits (124), Expect = 8e-08
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 25 EEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEE----EGDGEEEDGDEDE 80
EE E + G EE GE + + E +E E EG EEE E E EG+GEEE+G+ +
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEG 957
Query: 81 EAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E E G+ E + + + + + +E +
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEEEEGE 987
Score = 52.4 bits (124), Expect = 8e-08
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 25 EEAENGRDAPANGNANEENGEQEA-DNEVDEEEEEGG-EEEEEEEEGDGEEE---DGDED 79
EE E G G EE GE E D E + EEEEG E EEEE EG+GEEE +G+E
Sbjct: 923 EEGEEGE-----GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEG 977
Query: 80 E-EAESATGKRAAEDDEDDDVDTKKQKTDED 109
E E E G+ E++E ++ ++ + +E+
Sbjct: 978 EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Score = 51.2 bits (121), Expect = 2e-07
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 25 EEAEN-GRDAPANGNANEENGEQEADNEVDEEEEEG--GEEEEEEEEG--DGEEE----D 75
EE E G + G EE E E + E +E E EG GE E EEEEG +GEEE +
Sbjct: 906 EEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGE 965
Query: 76 GDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
G+E+ E E G+ E++E + +++ +E +
Sbjct: 966 GEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGE 1000
Score = 50.1 bits (118), Expect = 4e-07
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 19 EKKEVVEEAEN-GRDAPANGNANEEN---GEQEADNEVDEEEEEGGEEEEEEEEGDGEEE 74
E +E EE E G + G EE GE+E EEE EG E EEEE EG GEEE
Sbjct: 866 EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG-EGEEEEGEGKGEEE 924
Query: 75 DGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+ + E E G+ ED E + + + + E++
Sbjct: 925 GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEE 960
Score = 50.1 bits (118), Expect = 4e-07
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDE-----EEEEGGEE-EEEEEEGDG 71
+E +E EE G + EE GE E + E +E EEEEG EE EE E+EG+G
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Query: 72 EE--EDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EE + +E+EE E + E++E D + K+
Sbjct: 1053 EENRRNREEEEEEEGKYQETGEEENERQDGEEYKK 1087
Score = 49.3 bits (116), Expect = 7e-07
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGE-------QEADNEVDEEEEEGGEEEEEEEEGD 70
+E++E E E G G EE GE +E + E + EE EG EEEE EG+
Sbjct: 828 EEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGE-GEEEEGEGE 886
Query: 71 GEEE-DGDEDEEAESATGKRAAE-DDEDDDVDTKKQKTDED 109
GEEE +G+ +EE G+ E + E+++ + K ++ E+
Sbjct: 887 GEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
Score = 48.9 bits (115), Expect = 9e-07
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEE---GDGEEE 74
+E+ + EE E + G E GE+E + ++EE G+EE+ EEE G+GEEE
Sbjct: 740 EEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEE 799
Query: 75 D----GDEDE--------EAESATGKRAAEDDEDDDVDTKKQKTDED 109
+ G+E E E E G+R E++E + + + + +E+
Sbjct: 800 ETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEE 846
Score = 48.1 bits (113), Expect = 1e-06
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE-EEEEEEEGDGEEEDG 76
K ++E E G + G + GE E + E EEE GE E EEE EG+GEE +G
Sbjct: 920 KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG 979
Query: 77 DEDEEAESATGKRAAEDDEDDD 98
+ +EE G+ ++E ++
Sbjct: 980 EGEEEEGEGEGEEEEGEEEGEE 1001
Score = 47.8 bits (112), Expect = 2e-06
Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 58/153 (37%)
Query: 10 SEITTKDLKEKKEVVE-------EAENGRDAPANGNANE-------------ENGEQ--- 46
+EI + DL +K EV E EAE+G + +G E E GE+
Sbjct: 623 TEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKG 682
Query: 47 --------EADNEVDEEEE---EGGEEEE--------------------EEEEGDGEEED 75
E + E+ E+EE GEE+E EEE G+GEEE+
Sbjct: 683 RGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEE 742
Query: 76 GD-EDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
GD E+EE + GK E+ E ++V+ +++K +
Sbjct: 743 GDREEEEEKEGEGK---EEGEGEEVEGEREKEE 772
Score = 44.7 bits (104), Expect = 2e-05
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 18 KEKKEVVEEA---ENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE-- 72
KE+ + +EE E+G G+ EE ++ E E EE GE E+EE E E
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER 780
Query: 73 -------EEDGDEDEEAESATGKRAAEDDEDDDVD 100
EE+GD+ E E T R E +E +V+
Sbjct: 781 AGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVE 815
Score = 43.1 bits (100), Expect = 5e-05
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 25 EEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE--------EEEEEEEGDGEEEDG 76
EE E + G E GE+E E EE E+ GE EEEEEEEG +E
Sbjct: 1015 EEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGE 1074
Query: 77 DEDEEAESATGKRAAE 92
+E+E + K+ ++
Sbjct: 1075 EENERQDGEEYKKVSK 1090
Score = 42.7 bits (99), Expect = 6e-05
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 25 EEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEE--EEEEGDGEEEDGDEDEEA 82
EE + + G EE +E + E ++EE E +EE +EE+G+ E + G+ +EE
Sbjct: 741 EEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEE 800
Query: 83 ESATGKRAAEDDEDDDVDTKKQKTDEDD 110
G+ E E + + ++ K + ++
Sbjct: 801 TEGRGEEKEEGGEVEGGEVEEGKGEREE 828
Score = 34.7 bits (78), Expect = 0.017
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEE 66
+ E+ ++ + + E E E G + G E +E + E + + +E GEEE E
Sbjct: 1020 EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079
Query: 67 EEGD 70
++G+
Sbjct: 1080 QDGE 1083
Score = 26.2 bits (56), Expect = 6.0
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 45 EQEADNEVDEEEEEGGEEEEEEEEGDG-EEEDGDEDEEAESATGKRAAEDDEDDDVDTKK 103
E +D EV+ EE+ G E+ +G+G EE++ + +EE G R + + D T K
Sbjct: 577 EAFSDEEVEIPEEKEG---AEDSKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDK 633
Query: 104 QKTDE 108
+ E
Sbjct: 634 AEVSE 638
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 2e-10
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 41 EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKRAAEDDEDD 97
+ E E D+E DE++E+ EEEE++E GD E+ GD E E ES G EDDED+
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 98 DVDTKKQKTDEDD 110
D D + DED+
Sbjct: 695 D-DDEDDDEDEDN 706
Score = 58.5 bits (140), Expect = 1e-09
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA------NGNANEENGEQEADNEVDEEEEEGGEE 62
SS T + E +E EE E+ D NG+++E+ G+ + DE E+ E
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 688
Query: 63 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 97
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 689 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 50.4 bits (119), Expect = 3e-07
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 17 LKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG 76
L+ K E E+ E D +E+ E+E D+E + E+GG+ E E E EDG
Sbjct: 634 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSE--DESEDG 684
Query: 77 DEDEEAESATGKRAAEDDEDDDVD 100
DE+EE + +DDEDDD D
Sbjct: 685 DENEEDD-----EDEDDDEDDDED 703
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEE 74
+D +++ E E+ ENG + G+++E + E E++ D +E E +E+E+++E D E+E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE---DGDENEEDDEDEDDDEDDDEDE 704
Query: 75 DGDEDEEAESATGKRAAEDDEDD 97
D + + + S++ + D + +
Sbjct: 705 DNESEGSSSSSSSSGDSSDSDSN 727
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 61.2 bits (147), Expect = 2e-10
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 41 EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKRAAEDDEDD 97
+ E E D+E DE++E+ EEEE++E GD E+ GD E E ES G EDDED+
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 98 DVDTKKQKTDEDD 110
D D + DED+
Sbjct: 695 D-DDEDDDEDEDN 706
Score = 58.5 bits (140), Expect = 1e-09
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA------NGNANEENGEQEADNEVDEEEEEGGEE 62
SS T + E +E EE E+ D NG+++E+ G+ + DE E+ E
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 688
Query: 63 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 97
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 689 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 50.4 bits (119), Expect = 3e-07
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 17 LKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG 76
L+ K E E+ E D +E+ E+E D+E + E+GG+ E E E EDG
Sbjct: 634 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSE--DESEDG 684
Query: 77 DEDEEAESATGKRAAEDDEDDDVD 100
DE+EE + +DDEDDD D
Sbjct: 685 DENEEDD-----EDEDDDEDDDED 703
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEE 74
+D +++ E E+ ENG + G+++E + E E++ D +E E +E+E+++E D E+E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE---DGDENEEDDEDEDDDEDDDEDE 704
Query: 75 DGDEDEEAESATGKRAAEDDEDD 97
D + + + S++ + D + +
Sbjct: 705 DNESEGSSSSSSSSGDSSDSDSN 727
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 61.2 bits (147), Expect = 2e-10
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 41 EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE---EAESATGKRAAEDDEDD 97
+ E E D+E DE++E+ EEEE++E GD E+ GD E E ES G EDDED+
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 731
Query: 98 DVDTKKQKTDEDD 110
D D + DED+
Sbjct: 732 D-DDEDDDEDEDN 743
Score = 58.5 bits (140), Expect = 1e-09
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPA------NGNANEENGEQEADNEVDEEEEEGGEE 62
SS T + E +E EE E+ D NG+++E+ G+ + DE E+ E
Sbjct: 666 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENE 725
Query: 63 EEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 97
E++E+E D E++D DED E+E ++ ++ D D
Sbjct: 726 EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 760
Score = 50.4 bits (119), Expect = 3e-07
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 17 LKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG 76
L+ K E E+ E D +E+ E+E D+E + E+GG+ E E E EDG
Sbjct: 671 LQSKSESEEDDEEDED-------DEDEDEEEEDDENGDSSEDGGDSSESSSE--DESEDG 721
Query: 77 DEDEEAESATGKRAAEDDEDDDVD 100
DE+EE + +DDEDDD D
Sbjct: 722 DENEEDD-----EDEDDDEDDDED 740
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEE 74
+D +++ E E+ ENG + G+++E + E E++ D +E E +E+E+++E D E+E
Sbjct: 685 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE---DGDENEEDDEDEDDDEDDDEDE 741
Query: 75 DGDEDEEAESATGKRAAEDDEDD 97
D + + + S++ + D + +
Sbjct: 742 DNESEGSSSSSSSSGDSSDSDSN 764
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 60.5 bits (145), Expect = 3e-10
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 41/125 (32%)
Query: 27 AENGRDAPANGNANEENGEQEADNEVDEEEEEGGEE---------------EEEEEEGDG 71
A+NG++A + EE+ + E D E DE+E+E +E E+E++E D
Sbjct: 134 AKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDE 193
Query: 72 EEEDGDEDEEAES---------ATGKRAA-----------------EDDEDDDVDTKKQK 105
++ED D+DEE +S A GK+AA EDDED+D D +
Sbjct: 194 DDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDD 253
Query: 106 TDEDD 110
D+DD
Sbjct: 254 EDDDD 258
Score = 59.3 bits (142), Expect = 6e-10
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 20 KKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDED 79
K V + G PA G N +N ++E + DEEE++ EE+EE++E + E+ED E
Sbjct: 116 KALVATPGKKGAAIPAKGAKNGKNAKKE---DSDEEEDDDSEEDEEDDEDEDEDEDEIEP 172
Query: 80 EEAESATGKRAAED-DEDDDVDTKKQKTDEDD 110
++A A+ED D++DD D + DE+D
Sbjct: 173 AAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Score = 51.6 bits (122), Expect = 1e-07
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 19/127 (14%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENG--RDAPANGNANEENGEQEADNEVDEEEEEG 59
SD D SE +D +++ E +E E + A A + +E+ E + D+E D+++EE
Sbjct: 145 SDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Query: 60 GEEEEEEE-----------------EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 102
EEE E + E+ED +ED+E E EDD+D+D + +
Sbjct: 205 DSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEE 264
Query: 103 KQKTDED 109
+++ +E+
Sbjct: 265 EEEEEEE 271
Score = 48.9 bits (115), Expect = 9e-07
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANG------------NANEENGEQEADNEVDE 54
D + +D + +E E E PA G N E+ E+E D + D+
Sbjct: 188 DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD 247
Query: 55 EEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV-DTKKQKTD 107
+++E ++E++++E D EEE+ +E+E + A GKR E + + KKQK +
Sbjct: 248 DDDE--DDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVE 299
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 21 KEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE 80
K V E+ + D + ++E+ E D++ D+EEEE EEEE +E G+ + +
Sbjct: 230 KNVAEDEDEEEDDEDEDDDDDEDDED--DDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQ 287
Query: 81 EAESATGKRAAEDDE 95
+A K+ E E
Sbjct: 288 KAAPEAKKQKVEGTE 302
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 33 APANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEE 73
A A N + EV+E+ E+ E+EE++ GEE
Sbjct: 5 AKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEE 45
Score = 26.2 bits (56), Expect = 6.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 44 GEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEA--ESATGKRAA 91
G+ + D + + EE+ E+EE +EED EE GK+AA
Sbjct: 8 GKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAA 57
>gi|169210053 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 60.5 bits (145), Expect = 3e-10
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 41 EENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVD 100
EE +E + EV+EEE+E EE+EE+EE + +EE+ +EDEE E GK+ E+ ++++D
Sbjct: 119 EEEEVEEEEEEVEEEEKE--EEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEEKVEEEID 176
Query: 101 TKKQKT 106
T+ Q+T
Sbjct: 177 TEIQRT 182
Score = 40.0 bits (92), Expect = 4e-04
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEE EEEE + EEE+ +E++E + ++ E +ED++ + K+ K E++
Sbjct: 120 EEEVEEEEEEVEEEEKEEEKEEDEEEEEKEEEKEEDEEEEEKEGKKMEEE 169
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEE 66
+ E+ ++ +E+KE EE E E+ E+E D E +E+E + EEE+ E
Sbjct: 125 EEEEEVEEEEKEEEKEEDEEEE------------EKEEEKEEDEEEEEKEGKKMEEEKVE 172
Query: 67 EEGDGE 72
EE D E
Sbjct: 173 EEIDTE 178
Score = 33.1 bits (74), Expect = 0.049
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Query: 65 EEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
EEEE + EEE+ +E+E+ E E +ED++ + K+++ +ED+
Sbjct: 119 EEEEVEEEEEEVEEEEKEE--------EKEEDEEEEEKEEEKEEDE 156
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 57 EEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
++G EEEE E EEE+ E+EE E + ED+E+++ + +K++ +E++
Sbjct: 113 QQGLPVEEEEVE---EEEEEVEEEEKE----EEKEEDEEEEEKEEEKEEDEEEE 159
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 59.3 bits (142), Expect = 6e-10
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEE 64
A D+ +E+ D +E+ E E+ E+ D +E +++ D E DE+++E EEEE
Sbjct: 155 APDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEE 214
Query: 65 E---EEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 98
E +EE + E+ED +E+E + KR +D+ +DD
Sbjct: 215 EFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGEDD 251
Score = 58.9 bits (141), Expect = 8e-10
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 32 DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAA 91
DA +G +EE ++E ++E DE++E+G EEE +EE+ + E+ +GDED++ S +
Sbjct: 159 DAEVDG-VDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFG 217
Query: 92 EDDEDDDVDTKKQKTD 107
D+ED+D D +++ +
Sbjct: 218 LDEEDEDEDEDEEEEE 233
Score = 55.8 bits (133), Expect = 7e-09
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 36 NGNANEENGEQEADNEVD----EEEEEGGEEEEEEEEGDGEEEDGD-EDEEAESATG--- 87
+G E+ ++D EVD EEE+E GE+EE+E++ DGEEE+ D ED+E E G
Sbjct: 146 DGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDED 205
Query: 88 -KRAAEDDEDDDVDTKKQKTDEDD 110
+E++E+ +D + + DED+
Sbjct: 206 DDEVSEEEEEFGLDEEDEDEDEDE 229
Score = 52.4 bits (124), Expect = 8e-08
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 40 NEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV 99
+EE ++E +++ D EEEE EE++E+E+ +G+E+D DE E E G ++DED+D
Sbjct: 171 DEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDD-DEVSEEEEEFGLDEEDEDEDEDE 229
Query: 100 DT------KKQKTDEDD 110
+ +K+K + DD
Sbjct: 230 EEEEGGKGEKRKRETDD 246
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 58.5 bits (140), Expect = 1e-09
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 8 TSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEE 67
T I + D +E++E EE E + + EE ++E E +EEEEE EEE EEE
Sbjct: 879 TVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEE 938
Query: 68 EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 108
EG+ EEE+ +EDEE E E+ ED + T + +E
Sbjct: 939 EGELEEEEEEEDEEEE-----EELEEVEDLEFGTAGGEVEE 974
Score = 53.9 bits (128), Expect = 3e-08
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 36 NGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGD-------GEEEDGDEDEEAESATGK 88
N N+++E E+E + E +EEEEE EE+ EEEE D EEE+ + +EE E G+
Sbjct: 882 NINSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Query: 89 RAAEDDEDDDVDTKKQKTDED 109
E++E+D+ + ++ + ED
Sbjct: 942 LEEEEEEEDEEEEEELEEVED 962
Score = 53.5 bits (127), Expect = 4e-08
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 43 NGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTK 102
N E + E +EEEEE EEEEEEE+ + EEED +E E E + E+ E+++ + +
Sbjct: 884 NSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELE 943
Query: 103 KQKTDEDD 110
+++ +ED+
Sbjct: 944 EEEEEEDE 951
Score = 52.0 bits (123), Expect = 1e-07
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 38 NANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD 97
N N + E+E + E +EEEEE EEEE+ EE + +EE+ E+EE E + E++E +
Sbjct: 882 NINSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Query: 98 DVDTKKQKTDEDD 110
+ ++++ +E++
Sbjct: 942 LEEEEEEEDEEEE 954
Score = 51.6 bits (122), Expect = 1e-07
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 6 VDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEE--NGEQEADNEVDEE--EEEGGE 61
+++S E ++ +E++E EE E D EE E+E + E +EE EEEG
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGEL 942
Query: 62 EEEEEEEGDGEEEDGDEDEEAESATGKRAAED 93
EEEEEEE + EEE+ +E E+ E T E+
Sbjct: 943 EEEEEEEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 47 EADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKT 106
E D V EEEEEEEE + EEE+ +E+E+ E E++ED++ ++++
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFE--------EEEEDEEEYFEEEEE 926
Query: 107 DEDD 110
+E++
Sbjct: 927 EEEE 930
Score = 32.3 bits (72), Expect = 0.084
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 3 DAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQE--ADNEVDEEEEEGG 60
+ DT+ + + L + EV E E+ PA G +E E+E A + EEE E G
Sbjct: 1017 ERGADTAPTLAPEALPSQGEVEREGES----PAAGPPPQELVEEEPSAPPTLLEEETEDG 1072
Query: 61 EEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDD 98
++ + EE+ + + EAE A ++ E DD
Sbjct: 1073 SDKVQPPPETPAEEEMETETEAE------ALQEKEQDD 1104
Score = 31.6 bits (70), Expect = 0.14
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 7 DTSSEITTKDLKEKKEVVEE---AENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEE 63
+ E +D +E++E EE E + EE GE E + E EE+EE EE
Sbjct: 900 EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE--EEDEEEEEEL 957
Query: 64 EEEEE-----GDGEEEDG 76
EE E+ GE E+G
Sbjct: 958 EEVEDLEFGTAGGEVEEG 975
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 58.5 bits (140), Expect = 1e-09
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 14 TKDLKEKKEVV-EEAENGRDAPANGNANEENGEQEADNEVDEEEE------EGGEEEEEE 66
T+D+ EK+E EE D P + + +E G++E + E++EE+E E E+EEEE
Sbjct: 96 TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155
Query: 67 EEGDGEEEDGDEDEEAE-SATGKRAAEDDEDDD 98
EE + EEE+ +E+E+ + + R +D E DD
Sbjct: 156 EEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDD 188
Score = 57.0 bits (136), Expect = 3e-09
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 9 SSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEE 68
SS + D + E ++E E + + +E E E D E D EEEE EEE+E+++
Sbjct: 84 SSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDD 143
Query: 69 GDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKK----QKTDEDD 110
DGE+ + DE+EE E + E++ED ++ Q T++DD
Sbjct: 144 EDGEDVE-DEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDD 188
Score = 56.2 bits (134), Expect = 5e-09
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADN--EVDEEEEEGGEEEEEEEEGDGEEED 75
K K V+ + D + + E+ E+E D E E+ +E G+E+EE+EEGD EEE+
Sbjct: 74 KRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEE 133
Query: 76 GDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E+E+ + ED+E+++ + ++++ +E++
Sbjct: 134 EIEEEDEDDDEDGEDVEDEEEEEEEEEEEEEEEEN 168
Score = 44.3 bits (103), Expect = 2e-05
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 21/90 (23%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+D D E D +E++E+ EE E+ ++E+GE D E +EEEEE E
Sbjct: 114 NDEPGDEDEEDEEGDREEEEEIEEEDED----------DDEDGEDVEDEEEEEEEEEEEE 163
Query: 62 EEEEEEE-----------GDGEEEDGDEDE 80
EEEE E+ D E++D + DE
Sbjct: 164 EEEENEDHQMNCHNTRIMQDTEKDDNNNDE 193
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 248 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 307
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 308 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 341
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 246 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 304
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 305 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 336
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 264 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 315
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 316 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 365
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 232 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 291
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 292 GSTSEESEEEEEEEEEEEEETGSNSEE 318
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 258 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 317
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 318 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 351
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 256 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 314
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 315 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 274 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 325
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 326 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 375
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEE 328
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 58.2 bits (139), Expect = 1e-09
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAEN----------GRDAPANGNA---NEENGE-Q 46
M +A + E+ +EKKE EE E + +P A EE GE +
Sbjct: 469 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 528
Query: 47 EADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKT 106
E + + +EEEE+ G + ++ EEG E+E E EE E G+ AE E ++ + K++K
Sbjct: 529 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEAKEEKK 587
Query: 107 DED 109
E+
Sbjct: 588 VEE 590
Score = 43.1 bits (100), Expect = 5e-05
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 8 TSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEE 67
T+ E+ ++ ++++E +E E D A + EE G ++ + E+E GE+EE E
Sbjct: 516 TAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSS----EKEEGEQEEGET 571
Query: 68 EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 108
E + E E+ + EE + E+ D K +K ++
Sbjct: 572 EAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 612
Score = 39.7 bits (91), Expect = 5e-04
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEE----------GGEEE 63
TK EK E+ E + A E+ E E E EEE E
Sbjct: 460 TKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE 519
Query: 64 EEEEEGDGEEEDG--DEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EEEG+ EEE+G +E+EE E A +A E + + ++K++ ++++
Sbjct: 520 VKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEE 568
Score = 35.8 bits (81), Expect = 0.008
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEE--EEEEEGDGE 72
K+ KE+ + +++ + A G + EE ++ A E+ GE E EE E+ E
Sbjct: 759 KETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE 818
Query: 73 EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQK 105
+ G E+E+ G + DE D ++K
Sbjct: 819 KGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 851
Score = 32.0 bits (71), Expect = 0.11
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEV-----------DEEEEEG 59
E K+ ++++V ++ E +D P A E ++EA EV ++E +E
Sbjct: 706 EKEVKEAPKEEKVEKKEEKPKDVPEKKKA-ESPVKEEAVAEVVTITKSVKVHLEKETKEE 764
Query: 60 GE--EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 108
G+ ++E+E+E G E +E+ + A G R + + +V+ K++ E
Sbjct: 765 GKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQE 815
Score = 28.9 bits (63), Expect = 0.93
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGN---ANEENGEQEADNEVDEEEEE 58
SD A + SE K+ +KE E+ E +A A G A EE +E EV +EE
Sbjct: 545 SDQAEEGGSE---KEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEEL 601
Query: 59 GGEEE-EEEEEGDGEEEDGDEDEEAESATGKRAAED 93
+ + E+ E+ +E+ +S K E+
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEE 637
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 28 ENGRDAPANGNANEENGEQEADNEVDEEEEEG-------GEEEEEEEEGDGEEEDGDEDE 80
E G+ +P + EE G+ EE+ + E + + E G GE+++ +E++
Sbjct: 650 EKGK-SPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKE-EEEK 707
Query: 81 EAESATGKRAAEDDEDDDVDTKKQKTDE 108
E + A + E E+ D ++K E
Sbjct: 708 EVKEAPKEEKVEKKEEKPKDVPEKKKAE 735
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 35 ANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 93
A A GEQ+ E +E+E + +EE+ E+ + + +D E ++AES + A +
Sbjct: 690 AKSKAEVGKGEQK---EEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 745
Score = 26.2 bits (56), Expect = 6.0
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEE---------- 56
+ S E+ TK+ VE+ E + +P + EE G+ EE+
Sbjct: 590 EKSEEVATKEELVADAKVEKPEKAK-SPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPV 648
Query: 57 EEGGE----EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD-DVDTKKQKTDED 109
EE G+ + EE+G +E+A+S K E+ + +V +QK +E+
Sbjct: 649 EEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEE 706
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 58.2 bits (139), Expect = 1e-09
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 1 MSDAAVDTSSEITTKDLKEKKEVVEEAEN----------GRDAPANGNA---NEENGE-Q 46
M +A + E+ +EKKE EE E + +P A EE GE +
Sbjct: 93 MEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKE 152
Query: 47 EADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKT 106
E + + +EEEE+ G + ++ EEG E+E E EE E G+ AE E ++ + K++K
Sbjct: 153 EEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAE-AEGEEAEAKEEKK 211
Query: 107 DED 109
E+
Sbjct: 212 VEE 214
Score = 43.1 bits (100), Expect = 5e-05
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 8 TSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEE 67
T+ E+ ++ ++++E +E E D A + EE G ++ + E+E GE+EE E
Sbjct: 140 TAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSS----EKEEGEQEEGET 195
Query: 68 EGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 108
E + E E+ + EE + E+ D K +K ++
Sbjct: 196 EAEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEK 236
Score = 39.7 bits (91), Expect = 5e-04
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 14 TKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEE----------GGEEE 63
TK EK E+ E + A E+ E E E EEE E
Sbjct: 84 TKVEDEKSEMEEALTAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPE 143
Query: 64 EEEEEGDGEEEDG--DEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EEEG+ EEE+G +E+EE E A +A E + + ++K++ ++++
Sbjct: 144 VKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEE 192
Score = 35.8 bits (81), Expect = 0.008
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEE--EEEEEGDGE 72
K+ KE+ + +++ + A G + EE ++ A E+ GE E EE E+ E
Sbjct: 383 KETKEEGKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETKE 442
Query: 73 EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQK 105
+ G E+E+ G + DE D ++K
Sbjct: 443 KGSGREEEKGVVTNGLDLSPADEKKGGDKSEEK 475
Score = 32.0 bits (71), Expect = 0.11
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 11 EITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEV-----------DEEEEEG 59
E K+ ++++V ++ E +D P A E ++EA EV ++E +E
Sbjct: 330 EKEVKEAPKEEKVEKKEEKPKDVPEKKKA-ESPVKEEAVAEVVTITKSVKVHLEKETKEE 388
Query: 60 GE--EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDE 108
G+ ++E+E+E G E +E+ + A G R + + +V+ K++ E
Sbjct: 389 GKPLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQE 439
Score = 28.9 bits (63), Expect = 0.93
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGN---ANEENGEQEADNEVDEEEEE 58
SD A + SE K+ +KE E+ E +A A G A EE +E EV +EE
Sbjct: 169 SDQAEEGGSE---KEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEEL 225
Query: 59 GGEEE-EEEEEGDGEEEDGDEDEEAESATGKRAAED 93
+ + E+ E+ +E+ +S K E+
Sbjct: 226 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEE 261
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 28 ENGRDAPANGNANEENGEQEADNEVDEEEEEG-------GEEEEEEEEGDGEEEDGDEDE 80
E G+ +P + EE G+ EE+ + E + + E G GE+++ +E++
Sbjct: 274 EKGK-SPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKE-EEEK 331
Query: 81 EAESATGKRAAEDDEDDDVDTKKQKTDE 108
E + A + E E+ D ++K E
Sbjct: 332 EVKEAPKEEKVEKKEEKPKDVPEKKKAE 359
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 35 ANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAED 93
A A GEQ+ E +E+E + +EE+ E+ + + +D E ++AES + A +
Sbjct: 314 AKSKAEVGKGEQK---EEEEKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAE 369
Score = 26.2 bits (56), Expect = 6.0
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 16/118 (13%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEE---------- 56
+ S E+ TK+ VE+ E + +P + EE G+ EE+
Sbjct: 214 EKSEEVATKEELVADAKVEKPEKAK-SPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPV 272
Query: 57 EEGGE----EEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDD-DVDTKKQKTDED 109
EE G+ + EE+G +E+A+S K E+ + +V +QK +E+
Sbjct: 273 EEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEE 330
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 249 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 308
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 309 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 342
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 247 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 305
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 306 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 337
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 265 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 316
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 317 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 366
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 233 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 292
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 293 GSTSEESEEEEEEEEEEEEETGSNSEE 319
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 258 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 317
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 318 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 351
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 256 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 314
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 315 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 346
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 274 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 325
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 326 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 375
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 242 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 301
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 302 GSTSEESEEEEEEEEEEEEETGSNSEE 328
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 226 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 285
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 286 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 319
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 224 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 282
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 283 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 314
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 242 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 293
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 294 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 343
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 210 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 269
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 270 GSTSEESEEEEEEEEEEEEETGSNSEE 296
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 215 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 274
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 275 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 308
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 213 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 271
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 272 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 303
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 231 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 282
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 283 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 332
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 199 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 258
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 259 GSTSEESEEEEEEEEEEEEETGSNSEE 285
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 4 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 63
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 64 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 97
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 2 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 60
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 61 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 92
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 20 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 71
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 72 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 121
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 58.2 bits (139), Expect = 1e-09
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGG----EEEEEEEEGD 70
+DL + + ++E + + +A +G +E + E +EEEEEG EEEEEEE +
Sbjct: 260 RDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEE 319
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
EEE G EEA + + +E++ +D + + +
Sbjct: 320 EEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 353
Score = 51.6 bits (122), Expect = 1e-07
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 19 EKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDE 78
E+++++ + ++ D+ ++ E+ E+ + +EEEEE EEEEE + EE+ +E
Sbjct: 258 EERDLLSDLQDISDSERK-TSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE 316
Query: 79 DEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EE E TG + E E + +++ ED+
Sbjct: 317 EEEEEEETGSNSEEASEQSAEEVSEEEMSEDE 348
Score = 46.2 bits (108), Expect = 6e-06
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 2 SDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGE 61
+ +A +S+E + +E++E EE E G + E E+E + E +EEEE G
Sbjct: 276 TSSAESSSAESGSGSEEEEEEEEEEEEEG--------STSEESEEEEEEEEEEEEETGSN 327
Query: 62 EEEEEEEGDGE--EEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDED 109
EE E+ E EE+ EDEE E+ + D + ++ +E+
Sbjct: 328 SEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEE 377
Score = 37.0 bits (84), Expect = 0.003
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 26 EAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDG--DEDEEAE 83
E +GR E + + + D E + E E G G EE+ +E+EE E
Sbjct: 244 ELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEE 303
Query: 84 SATGKRAAEDDEDDDVDTKKQKTDEDD 110
+T + + E++E+++ + ++ ++ ++
Sbjct: 304 GSTSEESEEEEEEEEEEEEETGSNSEE 330
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 57.8 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 32 DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE----EAESATG 87
DA +G EE E E ++E D E E+G EEE +EEE + E+ +GD+D+ E E G
Sbjct: 179 DAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG 237
Query: 88 KRAAEDDEDDDVDTKKQKTDEDD 110
EDDED+D D +++++ + +
Sbjct: 238 LDKDEDDEDEDEDEEEEESGKGE 260
Score = 54.3 bits (129), Expect = 2e-08
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 21/105 (20%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEE-- 62
A D+ +++ D +K+E EE E+ +D NE+ E+E D E DE+E+ G++
Sbjct: 175 APDSDAQV---DGVDKEEEDEEGEDEKDXE-----NEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 63 ----EEEEEEG---DGEEEDGDEDEEAESA----TGKRAAEDDED 96
EEEEE G D ++ED DEDEE E + KR +D+ED
Sbjct: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 45 EQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
+QEA D + + G ++EEE+E +GE+E E+E+ E ++DED + D K
Sbjct: 172 DQEAP---DSDAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
Query: 105 KTDEDD 110
+ E++
Sbjct: 228 EVSEEE 233
Score = 32.7 bits (73), Expect = 0.064
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENG---EQEADNEVD-EEEEEGGEEEEEEEEGD 70
++L E+++ E+ E D EE G +++ ++E + EEEEE G+ E + E D
Sbjct: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
Query: 71 GEEEDG 76
+EEDG
Sbjct: 268 -DEEDG 272
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 53 DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
D E++E + + + + D EEED +E E+ + + E++ D++ D + +DD
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEED-EEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 57.8 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 32 DAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDE----EAESATG 87
DA +G EE E E ++E D E E+G EEE +EEE + E+ +GD+D+ E E G
Sbjct: 179 DAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFG 237
Query: 88 KRAAEDDEDDDVDTKKQKTDEDD 110
EDDED+D D +++++ + +
Sbjct: 238 LDKDEDDEDEDEDEEEEESGKGE 260
Score = 54.3 bits (129), Expect = 2e-08
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 21/105 (20%)
Query: 5 AVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEE-- 62
A D+ +++ D +K+E EE E+ +D NE+ E+E D E DE+E+ G++
Sbjct: 175 APDSDAQV---DGVDKEEEDEEGEDEKDXE-----NEDGEEEELDEEEDEDEDVEGDDDK 226
Query: 63 ----EEEEEEG---DGEEEDGDEDEEAESA----TGKRAAEDDED 96
EEEEE G D ++ED DEDEE E + KR +D+ED
Sbjct: 227 DEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETDDEED 271
Score = 37.7 bits (86), Expect = 0.002
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 45 EQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQ 104
+QEA D + + G ++EEE+E +GE+E E+E+ E ++DED + D K
Sbjct: 172 DQEAP---DSDAQVDGVDKEEEDE-EGEDEKDXENEDGEEEELDEEEDEDEDVEGDDDKD 227
Query: 105 KTDEDD 110
+ E++
Sbjct: 228 EVSEEE 233
Score = 32.7 bits (73), Expect = 0.064
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 15 KDLKEKKEVVEEAENGRDAPANGNANEENG---EQEADNEVD-EEEEEGGEEEEEEEEGD 70
++L E+++ E+ E D EE G +++ ++E + EEEEE G+ E + E D
Sbjct: 208 EELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEEEEESGKGENRKRETD 267
Query: 71 GEEEDG 76
+EEDG
Sbjct: 268 -DEEDG 272
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 53 DEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
D E++E + + + + D EEED +E E+ + + E++ D++ D + +DD
Sbjct: 169 DPEDQEAPDSDAQVDGVDKEEED-EEGEDEKDXENEDGEEEELDEEEDEDEDVEGDDD 225
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 57.8 bits (138), Expect = 2e-09
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 14 TKDLKEKKEVVEEAENGRD--APANGNANEENGEQEADNE-VDEEEEEGGEEEEEEEEGD 70
++ + KE V E G D ++G+++E+ E + E V+E+ EE E EE+ EE +
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EDG+E+EE E + E++E+ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 57.0 bits (136), Expect = 3e-09
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 10 SEITTKDLKEKKEVVEEAENGR----DAPANGNANEENGEQEADNEVDEEEEEGGEEEEE 65
S ++K+ +E + E G D N NEE G +E D E DEE EE EE+EE
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEE-DVEEDEEVEEDAEEDEE 224
Query: 66 ------EEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
EEE + EEE+ +E+EE E + +E +D DT+ + +D
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 53.5 bits (127), Expect = 4e-08
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEE 66
+ E +D++E +EV E+AE E+ E + D E +EEEEE EEEEEE
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAE-------------EDEEVDEDGEEEEEEEEEEEEEEEE 245
Query: 67 EEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV 99
EE + E+++ D+ EE + A D + V
Sbjct: 246 EEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Score = 43.9 bits (102), Expect = 3e-05
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 EVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEE 81
EV A + +EE G +E+G E EEE G EED +EDEE
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEE---GVEEDVEEDEE 214
Query: 82 AESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E AE+DE+ D D ++++ +E++
Sbjct: 215 VE-----EDAEEDEEVDEDGEEEEEEEEE 238
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGD-GEEEDG 76
+E++E EE E EE E+E + + +++EEG + + E D G E
Sbjct: 232 EEEEEEEEEEE------------EEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVS 279
Query: 77 DEDEEAESATGKRAAEDDEDD 97
D S +G +++ + +
Sbjct: 280 FTDGSVRSGSGTDGSDEKKKE 300
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 57.8 bits (138), Expect = 2e-09
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 14 TKDLKEKKEVVEEAENGRD--APANGNANEENGEQEADNE-VDEEEEEGGEEEEEEEEGD 70
++ + KE V E G D ++G+++E+ E + E V+E+ EE E EE+ EE +
Sbjct: 164 SRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDE 223
Query: 71 GEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD 110
+EDG+E+EE E + E++E+ + D + QK + +D
Sbjct: 224 EVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGND 263
Score = 57.0 bits (136), Expect = 3e-09
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 10 SEITTKDLKEKKEVVEEAENGR----DAPANGNANEENGEQEADNEVDEEEEEGGEEEEE 65
S ++K+ +E + E G D N NEE G +E D E DEE EE EE+EE
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEE-DVEEDEEVEEDAEEDEE 224
Query: 66 ------EEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTD 107
EEE + EEE+ +E+EE E + +E +D DT+ + +D
Sbjct: 225 VDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASD 272
Score = 53.5 bits (127), Expect = 4e-08
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 7 DTSSEITTKDLKEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEE 66
+ E +D++E +EV E+AE E+ E + D E +EEEEE EEEEEE
Sbjct: 199 ENEEEGVEEDVEEDEEVEEDAE-------------EDEEVDEDGEEEEEEEEEEEEEEEE 245
Query: 67 EEGDGEEEDGDEDEEAESATGKRAAEDDEDDDV 99
EE + E+++ D+ EE + A D + V
Sbjct: 246 EEEEYEQDERDQKEEGNDYDTRSEASDSGSESV 278
Score = 43.9 bits (102), Expect = 3e-05
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 22 EVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEE 81
EV A + +EE G +E+G E EEE G EED +EDEE
Sbjct: 158 EVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEE---GVEEDVEEDEE 214
Query: 82 AESATGKRAAEDDEDDDVDTKKQKTDEDD 110
E AE+DE+ D D ++++ +E++
Sbjct: 215 VE-----EDAEEDEEVDEDGEEEEEEEEE 238
Score = 27.7 bits (60), Expect = 2.1
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 18 KEKKEVVEEAENGRDAPANGNANEENGEQEADNEVDEEEEEGGEEEEEEEEGD-GEEEDG 76
+E++E EE E EE E+E + + +++EEG + + E D G E
Sbjct: 232 EEEEEEEEEEE------------EEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVS 279
Query: 77 DEDEEAESATGKRAAEDDEDD 97
D S +G +++ + +
Sbjct: 280 FTDGSVRSGSGTDGSDEKKKE 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.284 0.115 0.284
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,392,796
Number of Sequences: 37866
Number of extensions: 377108
Number of successful extensions: 29661
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 449
Number of HSP's that attempted gapping in prelim test: 2166
Number of HSP's gapped (non-prelim): 11553
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 18 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 46 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.