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Search of human proteins with 151101301
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens]
(550 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens] 1094 0.0
gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens] 1086 0.0
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 50 4e-06
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 40 0.004
gi|110832843 TBP-associated factor 4 [Homo sapiens] 40 0.006
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 40 0.006
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 40 0.006
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 40 0.007
gi|83367077 mucin 16 [Homo sapiens] 40 0.007
gi|161019170 mucin 5AC [Homo sapiens] 39 0.009
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 39 0.009
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 39 0.009
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 39 0.009
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 39 0.012
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 39 0.012
gi|226371735 iroquois homeobox 3 [Homo sapiens] 39 0.016
gi|71061468 centromere protein E [Homo sapiens] 39 0.016
gi|51468067 Sp5 transcription factor [Homo sapiens] 39 0.016
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 39 0.016
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 38 0.027
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.027
gi|56549696 E1A binding protein p400 [Homo sapiens] 37 0.036
gi|89026265 PREDICTED: mucin 12 [Homo sapiens] 37 0.047
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 37 0.047
gi|19924099 synapsin I isoform Ia [Homo sapiens] 37 0.047
gi|19924097 synapsin I isoform Ib [Homo sapiens] 37 0.047
gi|190341068 forkhead-associated (FHA) phosphopeptide binding do... 37 0.047
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 37 0.047
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 37 0.061
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 37 0.061
>gi|151101301 proteome of centriole 5 isoform 2 [Homo sapiens]
Length = 550
Score = 1094 bits (2829), Expect = 0.0
Identities = 550/550 (100%), Positives = 550/550 (100%)
Query: 1 MKWEEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAI 60
MKWEEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAI
Sbjct: 1 MKWEEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAI 60
Query: 61 EVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEIL 120
EVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEIL
Sbjct: 61 EVGKGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEIL 120
Query: 121 VSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLK 180
VSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLK
Sbjct: 121 VSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLK 180
Query: 181 QLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQD 240
QLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQD
Sbjct: 181 QLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQD 240
Query: 241 VYEGKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAM 300
VYEGKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAM
Sbjct: 241 VYEGKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAM 300
Query: 301 LSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKK 360
LSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKK
Sbjct: 301 LSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKK 360
Query: 361 EEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAAS 420
EEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAAS
Sbjct: 361 EEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAAS 420
Query: 421 ASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSS 480
ASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSS
Sbjct: 421 ASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSS 480
Query: 481 LAIMGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSL 540
LAIMGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSL
Sbjct: 481 LAIMGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSL 540
Query: 541 TSVHSIKVVD 550
TSVHSIKVVD
Sbjct: 541 TSVHSIKVVD 550
>gi|151101311 proteome of centriole 5 isoform 1 [Homo sapiens]
Length = 575
Score = 1086 bits (2808), Expect = 0.0
Identities = 547/547 (100%), Positives = 547/547 (100%)
Query: 4 EEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAIEVG 63
EEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAIEVG
Sbjct: 29 EEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAIEVG 88
Query: 64 KGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEILVSD 123
KGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEILVSD
Sbjct: 89 KGCDFHISSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEILVSD 148
Query: 124 FLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLKQLC 183
FLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLKQLC
Sbjct: 149 FLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLKQLC 208
Query: 184 NQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQDVYE 243
NQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQDVYE
Sbjct: 209 NQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQDVYE 268
Query: 244 GKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAMLSG 303
GKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAMLSG
Sbjct: 269 GKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEVCIQISNDYEAKVAMLSG 328
Query: 304 ALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKKEEY 363
ALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKKEEY
Sbjct: 329 ALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKKEEY 388
Query: 364 GPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASS 423
GPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASS
Sbjct: 389 GPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASS 448
Query: 424 VHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAI 483
VHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAI
Sbjct: 449 VHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAI 508
Query: 484 MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSV 543
MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSV
Sbjct: 509 MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSV 568
Query: 544 HSIKVVD 550
HSIKVVD
Sbjct: 569 HSIKVVD 575
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 50.4 bits (119), Expect = 4e-06
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 31/191 (16%)
Query: 169 RKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFF 228
+++ + + L+Q Q+N+LKE KT ++ + +++SL ++ K+K+ E +R
Sbjct: 931 KEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNI 990
Query: 229 HWRIGHVRARQDVYEGKLADQYYQRTLLK--------------KVWKVWRSVVQKQWKDV 274
R+ Q E KL + ++ L+ K S VQ + ++
Sbjct: 991 EVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEA 1050
Query: 275 VERA-------------CQARAEEVCIQISNDYEAKVAMLSG---ALENAKAEIQRMQHE 318
++RA CQ +A ++ ++ N YE ++ + + AL+ AK ++ +M
Sbjct: 1051 LQRASTALSNEQQARRDCQEQA-KIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASV 1109
Query: 319 KEHFEDSMKKA 329
++H E++ +KA
Sbjct: 1110 RQHLEETTQKA 1120
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 40.4 bits (93), Expect = 0.004
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 167 EMRKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRT 226
+ KE EK+ +KQL + L +L +T K+ + L I K KE I
Sbjct: 338 DANKELEKNTNKIKQLSQEKGRLHQLYET-------KEGETTRLIREIDKLKEDINSHVI 390
Query: 227 FFHWRIGHVRARQDVYEGKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQARAEEV 286
W ++A D ++ + D+ + T K ++K +D+++ +EE+
Sbjct: 391 KVKWAQNKLKAEMDSHK-ETKDKLKETTTKLTQAKEEADQIRKNCQDMIK--TYQESEEI 447
Query: 287 CIQISNDYEAKVAMLSGALE---NAKAEIQRMQHEKEHFEDSMKKAFMRGV 334
SN+ +AK+ + G LE K++ M H K + +K+ F G+
Sbjct: 448 ---KSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKELEDLKRTFKEGM 495
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 40.0 bits (92), Expect = 0.006
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 13/154 (8%)
Query: 378 PSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSAA 437
P P P +P +P P AA G SA A P+ A A + GA +AA
Sbjct: 283 PPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQ-----PGPGAAAAA 337
Query: 438 TAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEK 497
A + P+ V A A +T+ A +G A+ I ++ G P S V
Sbjct: 338 PAPGVKAESPKRVVQAAPPAAQTLAA--SGPASTAASMVIGPTM--QGALP--SPAAVPP 391
Query: 498 HHPVTVQTIPQATAAKYPRTIH--PESSTSASRS 529
P T +P+ A +++ P ++TS R+
Sbjct: 392 PAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRA 425
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 40.0 bits (92), Expect = 0.006
Identities = 46/191 (24%), Positives = 62/191 (32%), Gaps = 26/191 (13%)
Query: 370 KEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVS 429
K+ + L+P PP P PV P P+PP PS S S +A A
Sbjct: 1092 KDPAQPLEPKRPPPPRPVAPPTRPAPP------QRPPPPSGRSQPSPQAGLA-------- 1137
Query: 430 ALGAGSAATAASEEMYVPRV-VTSAQQKAGRTITARITGRCDFASKNRISSS------LA 482
G G A + + PR V SA Q R R+T + S L
Sbjct: 1138 --GPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLK 1195
Query: 483 IMGVSPPMSSV---VVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQS 539
PP SS+ P+ P + P P SRS + + S
Sbjct: 1196 PQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSSHSLPSEASS 1255
Query: 540 LTSVHSIKVVD 550
V + + D
Sbjct: 1256 QPQVKTNGISD 1266
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 40.0 bits (92), Expect = 0.006
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
SA + P PP L P P+PP A GG + S TS+ A+S++S V +G
Sbjct: 267 SAAVLPPPPPHALGSRGPPTPAPPGAPGGPACLGGTPGVSATSSSASSSTSSSVAEVGVG 326
Query: 433 AGSAATAASEEMYVPRVVTSAQQKA 457
AG + R + Q+ A
Sbjct: 327 AGGKRPGSVSSTDQERELKEKQRNA 351
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 39.7 bits (91), Expect = 0.007
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 11/177 (6%)
Query: 379 SAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAG-SAA 437
S+ P ++ P P P A ++AS T+T A + V + A A A
Sbjct: 392 SSVPSEAQISDPFAPEPTPPTTTAEIATASASASTTTTVTAVTAEVDLFGDAFAASPGEA 451
Query: 438 TAASEEMYVPR----VVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
AASE P V + +G A G + A + L + + PP +SV
Sbjct: 452 PAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAAPE------LDLFAMKPPETSV 505
Query: 494 VVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSVHSIKVVD 550
V T +P + P ++T+A+ + T + T + T+ + +D
Sbjct: 506 PVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAPPALD 562
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 39.7 bits (91), Expect = 0.007
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 15/169 (8%)
Query: 375 HLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAG 434
HL PS+ L T P P A+ + + + + TST A + + P S+L +G
Sbjct: 8657 HLSPSSVLADLVTTKPTSPM-------ATTSTLGNTSVSTSTPAFPETMMTQPTSSLTSG 8709
Query: 435 SAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVV 494
+ S+E TS+ + +++ TG S+ S P S++
Sbjct: 8710 LREISTSQE-------TSSATERSASLSGMPTGATTKVSRTEALSLGRTSTPGPAQSTIS 8762
Query: 495 VE-KHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTS 542
E +T + P T TI P++ S + S GT + T S S
Sbjct: 8763 PEISTETITRISTPLTTTGSAEMTITPKTGHSGASSQGTFTLDTSSRAS 8811
Score = 37.0 bits (84), Expect = 0.047
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 16/186 (8%)
Query: 366 GVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVH 425
G G +H SA P P VTSP + + + ++P ++ T T + SS+
Sbjct: 4836 GTTGSAFESHSTVSAYPEPSKVTSPNV-TTSTMEDTTISRSIPKSSKTTRTETETTSSLT 4894
Query: 426 VPVSALGAGSAATAASEEMYVP-RVVTSAQQKAGRTITARITGRCDFASKNRISSSLAI- 483
+ T+++E VP + +T A + RT + F ++ + SL I
Sbjct: 4895 PKLRETSISQEITSSTETSTVPYKELTGATTEVSRT-DVTSSSSTSFPGPDQSTVSLDIS 4953
Query: 484 ------MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHT 537
+ SP M+ +T QT P ++ T+ P ++T + G SA T
Sbjct: 4954 TETNTRLSTSPIMTE---SAEITITTQTGPHGATSQDTFTMDPSNTTPQA---GIHSAMT 5007
Query: 538 QSLTSV 543
+ +
Sbjct: 5008 HGFSQL 5013
Score = 36.6 bits (83), Expect = 0.061
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 388 TSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAASEEMYVP 447
+SP L +P + S A S ++ST + SS +PV++L S T P
Sbjct: 7086 SSPSLENPSSLPSLLSLPATTSPPPISSTLPVTISSSPLPVTSLLTSSPVTTTDMLHTSP 7145
Query: 448 RVVTSAQQKAGRTITARITGRCDFASKNRI--SSSLAIMGVSPPMS 491
+VTS+ K T R+T D + + S++ A V P S
Sbjct: 7146 ELVTSSPPKLSHTSDERLTTGKDTTNTEAVHPSTNTAASNVEIPSS 7191
Score = 32.3 bits (72), Expect = 1.2
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 381 PPMPLPVTSPLLPSPPAA----VGGASATAVPSAASMTSTR---------AASASSVHVP 427
PP PLPVTS LL S PA +G ++ S++S+++T A +VH
Sbjct: 7711 PPSPLPVTS-LLTSGPATTTDILGTSTEPGTSSSSSLSTTSHERLTTYKDTAHTEAVHPS 7769
Query: 428 VSALGAGSAATAASEEMYVPRVVTSAQQKAGRTI--TARITGRCDFASKNRISSSLA 482
+ G A T++ + + S+ T+ T+ +T F RI + LA
Sbjct: 7770 TNTGGTNVATTSSGYKSQSSVLADSSPMCTTSTMGDTSVLTSTPAFLETRRIQTELA 7826
Score = 31.2 bits (69), Expect = 2.6
Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSP-----------------PAAVGGASATAVPSAASMTS 415
S+ L + PLPVTS L SP P + S + + T+
Sbjct: 7112 SSTLPVTISSSPLPVTSLLTSSPVTTTDMLHTSPELVTSSPPKLSHTSDERLTTGKDTTN 7171
Query: 416 TRA------ASASSVHVPVSALGAGSAATAASE--EMYVPRVVTSAQQKAGRTITARITG 467
T A +AS+V +P S + S+A A SE + P +TS Q+ I+
Sbjct: 7172 TEAVHPSTNTAASNVEIPSSGHESPSSALADSETSKATSPMFITSTQEDTTVAISTP--- 7228
Query: 468 RCDFASKNRISSSLAIMGVSPPM--SSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTS 525
F +RI +I +SP + + VE + + + I TS
Sbjct: 7229 --HFLETSRIQKE-SISSLSPKLRETGSSVETSSAIETSAVLSEVSIGATTEISRTEVTS 7285
Query: 526 ASRSLGTRSAHTQSLTSVHSIKVV 549
+SR+ + SA + L + + + +
Sbjct: 7286 SSRTSISGSAESTMLPEISTTRKI 7309
Score = 29.3 bits (64), Expect = 9.8
Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 27/177 (15%)
Query: 387 VTSPLLPSPPAAVG---GASATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAASEE 443
+++ ++PS P ++G ++ T + + + ++ P ++ AG+ + A E
Sbjct: 6713 ISTEVIPSLPISLGITESSNMTIITRTGPPLGSTSQGTFTLDTPTTSSRAGTHSMATQE- 6771
Query: 444 MYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPVTV 503
+ +T+ K ++ I + K SSSL SP M+S V P T+
Sbjct: 6772 -FPHSEMTTVMNKDPEILSWTIPPSIE---KTSFSSSLM---PSPAMTSPPVSSTLPKTI 6824
Query: 504 QTIPQAT----------------AAKYPRTIHPESSTSASRSLGTRSAHTQSLTSVH 544
T P + P T P + +S S + T T ++ ++H
Sbjct: 6825 HTTPSPMTSLLTPSLVMTTDTLGTSPEPTTSSPPNLSSTSHEILTTDEDTTAIEAMH 6881
Score = 29.3 bits (64), Expect = 9.8
Identities = 47/200 (23%), Positives = 71/200 (35%), Gaps = 51/200 (25%)
Query: 355 STNNKKEEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLL--------PSPPAAVGGASATA 406
ST N+ PG S P+ +P T+ + PS + G S++A
Sbjct: 10805 STTNRALTNSPGEPATTVSLVTHPAQTSPTVPWTTSIFFHSKSDTTPSMTTSHGAESSSA 10864
Query: 407 VPSAASMTS---------TRAASASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKA 457
VP+ T T + + S +P+ L G T P + TS ++A
Sbjct: 10865 VPTPTVSTEVPGVVTPLVTSSRAVISTTIPILTLSPGEPET-------TPSMATSHGEEA 10917
Query: 458 GRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVV---VEKHHPVTVQTIPQATAAKY 514
SS++ VSP + VV V VT TIP T +
Sbjct: 10918 --------------------SSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTIPILTFS-- 10955
Query: 515 PRTIHPESSTSASRSLGTRS 534
PE++ S + S GT +
Sbjct: 10956 --LGEPETTPSMATSHGTEA 10973
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 378 PSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAAS----MTSTRAASASSVHVPVSALGA 433
P P P +TSP +P A A++++ P A+ +TST S ++ P+ +
Sbjct: 4746 PGTAPPPKVLTSP-ATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSSTL 4804
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
G+ T + +++ + T T A+ R +SS + +P + +
Sbjct: 4805 GTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWI 4864
Query: 494 VVE--KHHPVTVQTIPQATAAKYPRT--IHPESSTSASRSLGTRSAHTQSLT 541
+ E T T P AT + P T I E +T+A+ + T S T S T
Sbjct: 4865 LTELTTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSST 4916
Score = 32.3 bits (72), Expect = 1.2
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 10/164 (6%)
Query: 386 PVTSPLLPSPPAAVGGA----SATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAAS 441
P + P +++G S T P+A T+T +++ +VH + L + T A+
Sbjct: 3170 PTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTS-TVLTTTATTTGAT 3228
Query: 442 EEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPV 501
+ P T + +T TG A+ + + + V ++ + V
Sbjct: 3229 GSVATPS-STPGTAHTTKVLTTTTTGFT--ATPSSSPGTARTLPVWISTTTTPTTRGSTV 3285
Query: 502 TVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSVHS 545
T +IP T P + ++T A+ S+ T S+ TQ+ + H+
Sbjct: 3286 TPSSIPGTTHT--PTVLTTTTTTVATGSMATPSSSTQTSGTTHT 3327
Score = 30.0 bits (66), Expect = 5.7
Identities = 46/189 (24%), Positives = 68/189 (35%), Gaps = 32/189 (16%)
Query: 380 APPMPLPVTSPLLP---SPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSA 436
A P P T+ LP S S TA+PS S T S P + + S
Sbjct: 3793 ATPSSSPGTATALPALRSTATTPTATSVTAIPS--SSLGTAWTRLSQTTTPTATM---ST 3847
Query: 437 ATAASEEMYVPRVVTSAQQKAGRTITARITGRC-------DFASKNRISSSLAIMGVSPP 489
AT +S P V ++ T T R TG A ++ ++ + P
Sbjct: 3848 ATPSS----TPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTATP 3903
Query: 490 MSSVVVEKHHPVTVQTI-------PQATAAKYPRTIH------PESSTSASRSLGTRSAH 536
SS PV + T T + P T H ++T A+ S+ T S+
Sbjct: 3904 SSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTHTATVLTTTTTTVATGSMATPSSS 3963
Query: 537 TQSLTSVHS 545
TQ+ + H+
Sbjct: 3964 TQTSGTTHT 3972
Score = 29.6 bits (65), Expect = 7.5
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Query: 393 PSPPAAVGGASATAVPSAA------SMTSTRAASASSVHVPVSALGAGSAATAASEEMYV 446
PS PA A+ ++ P + T+T AS S P S L +
Sbjct: 2579 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATT 2638
Query: 447 PRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPVTVQTI 506
P V +S + TA + ++S+ + S ++ T+
Sbjct: 2639 PTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATM 2698
Query: 507 PQATAAKYPRTIHPES--STSASRSLGTRSAHTQSLT--SVHSIKV 548
AT + P T H + + +A+ + T S T S T + H+ KV
Sbjct: 2699 STATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKV 2744
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 39.3 bits (90), Expect = 0.009
Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 11/154 (7%)
Query: 378 PSAPPMPLPVTSPLLPS----PPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGA 433
P P + T+P S P +A+G VP+ + T R+ S SS H +A +
Sbjct: 3974 PIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTS 4033
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
++ T + + P TS A T T + ++ SPP
Sbjct: 4034 ATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTE------SPPSPGT 4087
Query: 494 VVEKHHPVTVQTIPQATAAK-YPRTIHPESSTSA 526
H T +T AT +K T+ P S TSA
Sbjct: 4088 TTPGHTTATSRTTATATPSKTRTSTLLPSSPTSA 4121
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 378 PSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAAS----MTSTRAASASSVHVPVSALGA 433
P P P +TSP +P A A++++ P A+ +TST S ++ P+ +
Sbjct: 4276 PGTAPPPKVLTSP-ATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSSTL 4334
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
G+ T + +++ + T T A+ R +SS + +P + +
Sbjct: 4335 GTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWI 4394
Query: 494 VVE--KHHPVTVQTIPQATAAKYPRT--IHPESSTSASRSLGTRSAHTQSLT 541
+ E T T P AT + P T I E +T+A+ + T S T S T
Sbjct: 4395 LTELTTAATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSST 4446
Score = 38.9 bits (89), Expect = 0.012
Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 11/154 (7%)
Query: 378 PSAPPMPLPVTSPLLPS----PPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGA 433
P P + T+P S P +A+G VP+ + T R+ S SS H +A +
Sbjct: 2717 PIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPHTVRTAWTS 2776
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
++ T + + P TS A T T + ++ SPP
Sbjct: 2777 ATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPALSSPHPSSRTTE------SPPSPGT 2830
Query: 494 VVEKHHPVTVQTIPQATAAK-YPRTIHPESSTSA 526
H T +T AT +K T+ P S TSA
Sbjct: 2831 TTPGHTRATSRTTATATPSKTRTSTLLPSSPTSA 2864
Score = 37.4 bits (85), Expect = 0.036
Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 11/154 (7%)
Query: 378 PSAPPMPLPVTSPLLPS----PPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGA 433
P P + T+P S P +A+G VP+ + T R+ SS H +A +
Sbjct: 3417 PIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLPPSSPHTVRTAWTS 3476
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
++ + + P VTS A + T T + ++ SPP
Sbjct: 3477 ATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPALSSPHPSSRTTE------SPPSPGT 3530
Query: 494 VVEKHHPVTVQTIPQATAAK-YPRTIHPESSTSA 526
H T +T AT +K T+ P S TSA
Sbjct: 3531 TTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSA 3564
Score = 37.0 bits (84), Expect = 0.047
Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 11/154 (7%)
Query: 378 PSAPPMPLPVTSPLLPS----PPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGA 433
P P + T+P S P +A+G VP+ + T R+ SS H +A +
Sbjct: 2160 PIPPVLTTTATTPAATSNTVTPSSALGTTHTPPVPNTMATTHGRSLPPSSPHTVRTAWTS 2219
Query: 434 GSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSV 493
++ + + P VTS A T T + ++ SPP
Sbjct: 2220 ATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPALSSPHPSSRTTE------SPPSPGT 2273
Query: 494 VVEKHHPVTVQTIPQATAAK-YPRTIHPESSTSA 526
H T +T AT +K T+ P S TSA
Sbjct: 2274 TTPGHTTATSRTTATATPSKTRTSTLLPSSPTSA 2307
Score = 36.6 bits (83), Expect = 0.061
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Query: 386 PVTSPLLPSPPAAVGGA----SATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAAS 441
P + P +++G S T P+A T+T +++ +VH + L A + T A+
Sbjct: 4520 PTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTS-TVLTATATTTGAT 4578
Query: 442 EEMYVPRVV--TSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHH 499
+ P T+ K T T T + ++ + I + P ++
Sbjct: 4579 GSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGS 4638
Query: 500 PVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQS 539
VT +IP T R + ++T A+ S+ T S+ TQ+
Sbjct: 4639 TVTPSSIPGTTHT--ARVLTTTTTTVATGSMATPSSSTQT 4676
Score = 31.6 bits (70), Expect = 2.0
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 21/173 (12%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASA---TAVPSAASMTSTRAASASSVHVPVS 429
S+ S P L T+ + + + +S T +P + T+T A+ SS P S
Sbjct: 2681 SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSS 2740
Query: 430 ALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPP 489
ALG + P V + GR+++ A + S +L ++ P
Sbjct: 2741 ALGT----------THTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEP 2790
Query: 490 MSSVVVEKHHP-VTVQTIPQATAAKYPRTIHPESSTSAS-RSLGTRS-AHTQS 539
+ H P T T +T A + HP S T+ S S GT + HT++
Sbjct: 2791 STGT---SHTPAATTGTTQHSTPAL--SSPHPSSRTTESPPSPGTTTPGHTRA 2838
Score = 31.2 bits (69), Expect = 2.6
Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 13/169 (7%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASA---TAVPSAASMTSTRAASASSVHVPVS 429
S+ S P L T+ + + + +S T +P + T+T A+ S+ P S
Sbjct: 2124 SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSNTVTPSS 2183
Query: 430 ALGAGSA-----ATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISS-SLAI 483
ALG A + +P + A + T+ I G + ++S +LA
Sbjct: 2184 ALGTTHTPPVPNTMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAA 2243
Query: 484 MGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGT 532
+ S+ + HP + T + P T P +T+ SR+ T
Sbjct: 2244 TTGTTQHSTPALSSPHPSSRTT----ESPPSPGTTTPGHTTATSRTTAT 2288
Score = 31.2 bits (69), Expect = 2.6
Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASA---TAVPSAASMTSTRAASASSVHVPVS 429
S+ S P L T+ + + + +S T +P + T+T A+ SS P S
Sbjct: 3381 SSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSS 3440
Query: 430 ALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPP 489
ALG + P V + GR++ A + S L ++ P
Sbjct: 3441 ALGT----------THTPPVPNTTATTHGRSLPPSSPHTVRTAWTSATSGILGTTHITEP 3490
Query: 490 MSSVVVEKHHP-VTVQTIPQATAAKYPRTIHPESSTSAS 527
+ V H P T T +T A + HP S T+ S
Sbjct: 3491 ST---VTSHTPAATTSTTQHSTPAL--SSPHPSSRTTES 3524
Score = 30.8 bits (68), Expect = 3.4
Identities = 42/175 (24%), Positives = 67/175 (38%), Gaps = 20/175 (11%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASA---TAVPSAASMTSTRAASASSVHVPVS 429
S+ S P L T+ + + + +S T +P + T+T A+ SS P S
Sbjct: 3938 SSSTQTSGTPPSLITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPSS 3997
Query: 430 ALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPP 489
ALG + P V + GR+++ A + S +L ++ P
Sbjct: 3998 ALGT----------THTPPVPNTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEP 4047
Query: 490 MSSVVVEKHHP-VTVQTIPQATAAKYPRTIHPESSTSAS-RSLGTRSAHTQSLTS 542
+ H P T T +T A + HP S T+ S S GT + + TS
Sbjct: 4048 STGT---SHTPAATTGTTQHSTPAL--SSPHPSSRTTESPPSPGTTTPGHTTATS 4097
Score = 30.0 bits (66), Expect = 5.7
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 10/158 (6%)
Query: 386 PVTSPLLPSPPAAVGGA----SATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAAS 441
P + P +++G S T P+A T+T +++ +VH + L + T A+
Sbjct: 2535 PTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTS-TVLTTTATTTGAT 2593
Query: 442 EEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPV 501
+ P T + +T TG A+ + + + V ++ + V
Sbjct: 2594 GSVATPS-STPGTAHTTKVLTTTTTGFT--ATPSSSPGTARTLPVWISTTTTPTTRGSTV 2650
Query: 502 TVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQS 539
T +IP T P + ++T A+ S+ T S+ TQ+
Sbjct: 2651 TPSSIPGTTHT--PTVLTTTTTTVATGSMATPSSSTQT 2686
Score = 29.6 bits (65), Expect = 7.5
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Query: 393 PSPPAAVGGASATAVPSAA------SMTSTRAASASSVHVPVSALGAGSAATAASEEMYV 446
PS PA A+ ++ P + T+T AS S P S L +
Sbjct: 1889 PSTPATSSTATPSSTPGTTWILTKPTTTATTTASTGSTATPTSTLRTAPPPKVLTTTATT 1948
Query: 447 PRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPVTVQTI 506
P V +S + TA + ++S+ + S ++ T+
Sbjct: 1949 PTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATM 2008
Query: 507 PQATAAKYPRTIHPES--STSASRSLGTRSAHTQSLT--SVHSIKV 548
AT + P T H + + +A+ + T S T S T + H+ KV
Sbjct: 2009 STATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKV 2054
Score = 29.6 bits (65), Expect = 7.5
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 14/160 (8%)
Query: 386 PVTSPLLPSPPAAVGGA----SATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAAS 441
P + + P +++G A S T P+A T+T +++ +VH + L + T A+
Sbjct: 3235 PTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTS-TVLTTTTTTTRAT 3293
Query: 442 EEMYVPRVV--TSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHH 499
+ P T+ K T T T + ++ + I + P + +
Sbjct: 3294 GSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTT-----RGS 3348
Query: 500 PVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQS 539
VT +IP T + ++T A+ S+ T S+ TQ+
Sbjct: 3349 TVTPSSIPGTTHT--ATVLTTTTTTVATGSMATPSSSTQT 3386
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/171 (24%), Positives = 54/171 (31%), Gaps = 20/171 (11%)
Query: 365 PGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSV 424
P +G A P PP P P PSPPAA G A P A + ++S
Sbjct: 85 PRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSF 144
Query: 425 HVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIM 484
V L G+ A S P + +AG NR++ S
Sbjct: 145 TVHPRGLHRGAGARLLSNGHSAP------EPRAG--------------PANRLAGSPPGS 184
Query: 485 GVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSA 535
G P HP P AT A P + P S + T +
Sbjct: 185 GQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQCVSAATSTNDS 235
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 39.3 bits (90), Expect = 0.009
Identities = 42/171 (24%), Positives = 54/171 (31%), Gaps = 20/171 (11%)
Query: 365 PGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSV 424
P +G A P PP P P PSPPAA G A P A + ++S
Sbjct: 85 PRRRGSPERARPPPPPPPPAPPRPPPAAPSPPAAPGPRGGGASPGARRSDFLQKTGSNSF 144
Query: 425 HVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIM 484
V L G+ A S P + +AG NR++ S
Sbjct: 145 TVHPRGLHRGAGARLLSNGHSAP------EPRAG--------------PANRLAGSPPGS 184
Query: 485 GVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSA 535
G P HP P AT A P + P S + T +
Sbjct: 185 GQWKPKVESGDPSLHPPPSPGTPSATPASPPASATPSQRQCVSAATSTNDS 235
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 38.9 bits (89), Expect = 0.012
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 380 APPMPLPVTSP-------LLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
+PP L +P PS P A G A +A PS +S +S+ +ASASS +A
Sbjct: 85 SPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAA 144
Query: 433 AGSAATAA 440
A +AA ++
Sbjct: 145 AAAAAASS 152
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 38.9 bits (89), Expect = 0.012
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 370 KEHSAHLDPSAPPMPLPVT--SPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVP 427
K+ A PP+ PV + L A GG SA A P ++ S ASS
Sbjct: 191 KDLGAPASKLPPPLSAPVAGLAALKAHAKEACGGPSAMATPE--NLASLMKGMASSP--- 245
Query: 428 VSALGAGSAATAASEEMYVPRVVTSAQQKAGR-TITARITGRCDFASKNRISSSLAIMGV 486
G G + +S Y+ R+ S Q A R + A+ T +C ++ + +G+
Sbjct: 246 ----GRGGISWQSSIVHYMNRMTQSQAQAASRLALKAQATNKCGLGLDLKVRTQKGELGM 301
Query: 487 SPPMSSV 493
SPP S +
Sbjct: 302 SPPGSKI 308
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 38.5 bits (88), Expect = 0.016
Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 354 DSTNNKKEEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAA-- 411
DS N+ E+ G++ + APP P+ V SP LPSPP ++ + P++A
Sbjct: 287 DSKNSDSEDSSEGLEDRPLPVLSLAPAPP-PVAVASPSLPSPPVSLDPCAPAPAPASALQ 345
Query: 412 --SMTSTRAASASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRC 469
+ S + S + S GAG + A+ ++ +A A + + G+
Sbjct: 346 KPKIWSLAETATSPDNPRRSPPGAGGSPPGAAVAPSALQLSPAAAAAAAHRLVSAPLGKF 405
Query: 470 DFASKNRISS--------SLAIMGVSPP-MSSVVVEKHHPVTVQTIPQATAAKYPRTIHP 520
+ L+++G +PP + + HP A AA + R P
Sbjct: 406 PAWTNRPFPGPPPGPRLHPLSLLGSAPPHLLGLPGAAGHP--------AAAAAFARPAEP 457
Query: 521 ESSTSASRSL 530
E T +L
Sbjct: 458 EGGTDRCSAL 467
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 38.5 bits (88), Expect = 0.016
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 57/238 (23%)
Query: 129 ENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAH--LKQLCNQI 186
++LQ+++ VL S LK NI ++K + E+E AH LK+ I
Sbjct: 1445 DDLQRLQEVLQSESDQLKENIKEIVAK-----------HLETEEELKVAHCCLKEQEETI 1493
Query: 187 NELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVRARQDVYEGKL 246
NEL+ +++ K+ IS++ + +K++ Q++YE +
Sbjct: 1494 NELR-------VNLSEKETEISTIQKQLEAINDKLQ-------------NKIQEIYEKE- 1532
Query: 247 ADQYYQRTLLKKVWKVWRSVVQ-KQWKDVVERACQARAEEVCIQISNDYEAKVAMLSGAL 305
++ +K++ +V V + KQ+K+ +A++ +Q E+K+ L+ L
Sbjct: 1533 -----EQFNIKQISEVQEKVNELKQFKE------HRKAKDSALQ---SIESKMLELTNRL 1578
Query: 306 ENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRNDAGIDSTNNKKEEY 363
+ ++ EIQ M EKE + + AL +E + +N + ++++EY
Sbjct: 1579 QESQEEIQIMIKEKEEMKRVQE--------ALQIERDQLKENTKEIVAKMKESQEKEY 1628
>gi|51468067 Sp5 transcription factor [Homo sapiens]
Length = 398
Score = 38.5 bits (88), Expect = 0.016
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 20/117 (17%)
Query: 372 HSAHLDPSAPPMPLPVTSPLLPSP----------PAAVGGASATAVPSAASMTSTRAASA 421
+S L P PP P P L P+P P A G A+ VP + ++ A +
Sbjct: 159 YSNLLPPPPPPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSG-LSGACAGAP 217
Query: 422 SSVHVPVSALGAGSAATAASEEM---------YVPRVVTSAQQKAGRTITARITGRC 469
+ P SA A +AA A + Y ++ Q KA TAR RC
Sbjct: 218 HAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRRC 274
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 38.5 bits (88), Expect = 0.016
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 374 AHLDPSAPP---MPLPVTSPLLPSPPAAVGGASATAVPSAASMT--STRAASASSVHVPV 428
A +PS PP MP PV P++P PP + V + SMT + + S+ +P
Sbjct: 681 ASFNPSQPPPGFMPPPVPPPVVP-PPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPG 739
Query: 429 SALGAGSAATA--ASEEMYVPRVVTSAQQKAGRTITARITGRCDFAS--KNRISSSLAIM 484
++ + A +A A P ++K I +I+ + S N ISS+ AI+
Sbjct: 740 GSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAIL 799
Query: 485 GVSPP 489
G PP
Sbjct: 800 GGQPP 804
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 37.7 bits (86), Expect = 0.027
Identities = 43/180 (23%), Positives = 56/180 (31%), Gaps = 20/180 (11%)
Query: 370 KEHSAHLDPSAPPMPLPVTSPLLPSP---PAAVGGASATA-------VPSAASMTSTRAA 419
K+ + L+P PP P PV P P+P P GA + A P + T
Sbjct: 1097 KDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGAPKSPGTTRKDNI 1156
Query: 420 SASSVHVPVSALGAGSAATAASEEMYVPRV-VTSAQQKAGRTITARITGRCDFASKNRIS 478
S G G A + + PR V SA Q R R+T +
Sbjct: 1157 GRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSK 1216
Query: 479 SS------LAIMGVSPPMSSV---VVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRS 529
S L PP SS+ P+ P + P P SRS
Sbjct: 1217 GSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRS 1276
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 37.7 bits (86), Expect = 0.027
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 383 MPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAASE 442
M P +P SP AS T PS AS+T T ++AS + P A G+ A+ +
Sbjct: 1 MAPPTRTPSRASPTRTPSTASLTGTPSRASLTGT-PSTASLMGTPSRASLTGTPPRASLK 59
Query: 443 EMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHPVT 502
G T A + AS R+ SS +++ +P M+S+
Sbjct: 60 ---------------GTTSMASLMVSPSRASLTRMQSS-SLLTRTPSMASLKRMPPRASR 103
Query: 503 VQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLT 541
+T+P+A+ + P T S S + T S + S+T
Sbjct: 104 TRTLPRASLMRRPSTASLTRSPSRASLTTTPSRASLSMT 142
Score = 36.2 bits (82), Expect = 0.080
Identities = 48/172 (27%), Positives = 61/172 (35%), Gaps = 15/172 (8%)
Query: 381 PPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAA 440
P P P SP AS T PS AS+T +++AS P A G+ +T A
Sbjct: 344 PSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGL-SSTASPTGTPPRASPTGTPST-A 401
Query: 441 SEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHP 500
S PR G IT AS R + G +PP +S
Sbjct: 402 SLTRKPPRA-----SPTGMLSRTSITKMDSTASPTRTPPRASPTG-TPPRASPTGTPSRA 455
Query: 501 VTVQTIPQATAAKYPRTIHPESSTSA-------SRSLGTRSAHTQSLTSVHS 545
T A+ P T P S S SR+ TR+ SLT + S
Sbjct: 456 SPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPSRASLTKMES 507
Score = 34.3 bits (77), Expect = 0.30
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 380 APPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTS-------TRAAS-ASSVHVPVSAL 431
+P P SP SP + AS T PS AS+T TR S AS P +A
Sbjct: 469 SPSTASPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTAS 528
Query: 432 GAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRIS----SSLAIMGVS 487
GS +TA + +T +A T R R + +R S S ++
Sbjct: 529 PTGSPSTALAMGSPSRAALTRTPSRASLT---RTPSRASLTTPSRASLTRTPSTVLLTRM 585
Query: 488 PPMSS 492
PP +S
Sbjct: 586 PPSAS 590
Score = 33.5 bits (75), Expect = 0.52
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 373 SAHLDPS-APPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSAL 431
S + PS A + +P + L +PP A S T PS AS+T T AS +P
Sbjct: 138 SLSMTPSTAAALTMPSRASLTRTPPRA----SLTMTPSTASLTRT-PPRASPTGMPSRTS 192
Query: 432 GAGSAATAASEEMYVPRVVTSAQQKAGRTIT---ARITGRCDFASKNRISSSLAIMGVSP 488
G +TA+ +M +T +A T T A TG AS + + S+ A++ +P
Sbjct: 193 PTGMPSTASLTKMDSTASITRTLSRASPTGTPPRASPTGSPPRASLSMMPST-ALLIRTP 251
Query: 489 PMSS 492
P +S
Sbjct: 252 PRAS 255
Score = 31.2 bits (69), Expect = 2.6
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 381 PPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAGSAATAA 440
PP P +P SP AS T PS AS T + ++AS P A + + A+
Sbjct: 443 PPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGS-PSTASPTGSPSRASLTRTPSRAS 501
Query: 441 SEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMSSVVVEKHHP 500
+M +T +A T T AS S+ MG SP +++
Sbjct: 502 LTKMESTASITRTPSRASPTWTP------STASPTGSPSTALAMG-SPSRAALT------ 548
Query: 501 VTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLT 541
+ A RT S T+ SR+ TR+ T LT
Sbjct: 549 ------RTPSRASLTRTPSRASLTTPSRASLTRTPSTVLLT 583
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 37.4 bits (85), Expect = 0.036
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 376 LDPSAP-PMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALGAG 434
+DP+ P P PLP +S S A V G+ P+ +S + +++ + PV++ G
Sbjct: 651 VDPAPPCPRPLPTSST---SSLAPVSGSGPGPSPARSSPVNRPSSATNKALSPVTSRTPG 707
Query: 435 SAATAASEEMYVPRVVTSAQQKAGRTITARIT 466
A+A ++ + TS+Q + T+T +IT
Sbjct: 708 VVASAPTKPQSPAQNATSSQDSSQDTLTEQIT 739
Score = 33.1 bits (74), Expect = 0.68
Identities = 46/197 (23%), Positives = 69/197 (35%), Gaps = 19/197 (9%)
Query: 360 KEEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPP---AAVGGASATAVPSAAS---- 412
KE+ Q K + PP P P P P PP G+ A P A
Sbjct: 2487 KEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAVQPQPQ 2546
Query: 413 ---MTSTRAASASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITG-- 467
T + A + P G +A A + + V +G I I G
Sbjct: 2547 PQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVNTIAGVP 2606
Query: 468 RCDFASKN-RISSSLAIMGVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSA 526
F S N R++S +A ++ P S + V T P A P T P+ S
Sbjct: 2607 AATFQSINKRLASPVAPGALTTPGGSAPAQ-----VVHTQPPPRAVGSPATATPD-LVSM 2660
Query: 527 SRSLGTRSAHTQSLTSV 543
+ + G R+ + + ++V
Sbjct: 2661 ATTQGVRAVTSVTASAV 2677
Score = 29.6 bits (65), Expect = 7.5
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 362 EYGPGVQGKE---HSAHLDPSAPPMPLPVT--SPLLPSPPAAVGGASATAVPSAASMTST 416
+YG +G+ S H +A P PL PP A A+ A +AA ++
Sbjct: 1431 QYGQKPEGRTVAFPSTHPPRTAAPTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTS 1490
Query: 417 RAASASSVHVPVSALGAGSAATAAS 441
+A++++ H P SA ++TAAS
Sbjct: 1491 QASASAPRHQPASA-----SSTAAS 1510
Score = 29.3 bits (64), Expect = 9.8
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 365 PGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSV 424
PG +G+E AH P+ PP SP P P+A A + + + A+ +V
Sbjct: 21 PGSEGEEQPAH--PNPPP------SPAAPFAPSASPSAPQSPSYQIQQLMNRSPATGQNV 72
Query: 425 HVPVSALG 432
++ + ++G
Sbjct: 73 NITLQSVG 80
>gi|89026265 PREDICTED: mucin 12 [Homo sapiens]
Length = 978
Score = 37.0 bits (84), Expect = 0.047
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 382 PMPLPVTSPLLPSPPAAVGGASATAVP--SAASMTSTRAASASSVHV-PVSALGAGSAAT 438
P P TS + + G S+T SA+S T R+ +++VH PV+ S A
Sbjct: 179 PAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPAR 238
Query: 439 AASEEMYVPRVVTSAQQKAGRTI----TARITGRCDFASKNRISSSLAIMGVSPPMSSVV 494
+ + + + + +T+ ++ +GR + ++R S S +S P S+
Sbjct: 239 STTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSE---ESRTSHSSTTHTISSPPSTTS 295
Query: 495 VEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTS 542
P + + P + A T PESST++ RS + ++H+ T+
Sbjct: 296 ALVEEPTSYHSSPGSIAT----THFPESSTTSGRSEESTASHSSPDTN 339
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 37.0 bits (84), Expect = 0.047
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 382 PMPLPVTSPLLPSPPAAVGGASATAVP--SAASMTSTRAASASSVHV-PVSALGAGSAAT 438
P P TS + + G S+T SA+S T R+ +++VH PV+ S A
Sbjct: 1330 PAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPAR 1389
Query: 439 AASEEMYVPRVVTSAQQKAGRTI----TARITGRCDFASKNRISSSLAIMGVSPPMSSVV 494
+ + + + + +T+ ++ +GR + ++R S S +S P S+
Sbjct: 1390 STTSGLVEESTAYHSSPGSTQTMHFPESSTASGRSE---ESRTSHSSTTHTISSPPSTTS 1446
Query: 495 VEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTS 542
P + + P + A T PESST++ RS + ++H+ T+
Sbjct: 1447 ALVEEPTSYHSSPGSIAT----THFPESSTTSGRSEESTASHSSPDTN 1490
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 37.0 bits (84), Expect = 0.047
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 364 GPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASS 423
GPG E S+ + P+A SP PSP ++ GG +++ +A T+ AA+ S
Sbjct: 45 GPGTATAERSSGVAPAA--------SPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFS 96
Query: 424 VHVPVSALGAGSAATAA 440
V + GAG A+
Sbjct: 97 EQVGGGSGGAGRGGAAS 113
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 37.0 bits (84), Expect = 0.047
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 364 GPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASS 423
GPG E S+ + P+A SP PSP ++ GG +++ +A T+ AA+ S
Sbjct: 45 GPGTATAERSSGVAPAA--------SPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFS 96
Query: 424 VHVPVSALGAGSAATAA 440
V + GAG A+
Sbjct: 97 EQVGGGSGGAGRGGAAS 113
>gi|190341068 forkhead-associated (FHA) phosphopeptide binding domain
1 [Homo sapiens]
Length = 1412
Score = 37.0 bits (84), Expect = 0.047
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 106 SPATNSSHTD-AHEILVSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWH 164
+P T SS D A+E L+ D L + + + + V+ L T S +S R +
Sbjct: 978 APMTESSAKDMAYEHLIDDLLAAQKEILSQQEVIMKLRKDL-TEAHSRMSDLRGELNEKQ 1036
Query: 165 RMEMRKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIEL 223
+ME+ E++ ++Q +++ LKE + +KD + +L A+ +EK L
Sbjct: 1037 KMEL----EQNVVLVQQQSKELSVLKEKMAQMSSLVEKKDRELKALEEALRASQEKHRL 1091
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.0 bits (84), Expect = 0.047
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
SA L + P+P ++P+ S A V +++ VP A+ + A+++ S VP S
Sbjct: 1767 SAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVP-ASPLAPVSASASVSASVPASTSA 1825
Query: 433 AGSAATAASEEMYVPR-VVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPMS 491
A +++A P ++ S A TI A AS ++S+LA P
Sbjct: 1826 AAITSSSAPASAPAPTPILASVSTPASVTILAS-------ASIPILASALASTSAPTPAP 1878
Query: 492 SVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSAS 527
+ +T TIP A P P + SAS
Sbjct: 1879 AASSPAAPVITAPTIP----ASAPTASVPLAPASAS 1910
Score = 33.9 bits (76), Expect = 0.40
Identities = 43/166 (25%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 373 SAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPS---AASMTSTRAASASSVHVPVS 429
SA L PS TS LP+ V +++ VP+ A + ST A +S PVS
Sbjct: 1751 SAPLPPSTSASVPASTSAPLPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVS 1810
Query: 430 ALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPP 489
A + SA+ AS +TS+ A I + I +S +I P
Sbjct: 1811 ASASVSASVPASTS---AAAITSSSAPASAPAPTPILASVSTPASVTILASASI----PI 1863
Query: 490 MSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSA 535
++S + P A P S+ +AS L SA
Sbjct: 1864 LASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASA 1909
Score = 30.0 bits (66), Expect = 5.7
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 386 PVTSPLLPSPPAAVGGASATAVPSAASMTSTRAAS-----ASSVHVPVSALGAGSAATAA 440
PVTS +PP A G +S+ + PS A+ S +AS +SV S GAG+ T++
Sbjct: 2269 PVTST---APPIATGVSSSASGPSTANYNSFSSASMPQIPVASVTPTASLSGAGTYTTSS 2325
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 36.6 bits (83), Expect = 0.061
Identities = 60/295 (20%), Positives = 122/295 (41%), Gaps = 42/295 (14%)
Query: 117 HEILVSDFLVSDENLQKMENVLDLWSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHA 176
+E+ SD E ++ + L + G KT++ +L + R E R+++E+
Sbjct: 290 YEMSASDTRQRQEWTAAIQMAIRLQAEG-KTSLHKDLKQ--------KRREQREQRERRR 340
Query: 177 AHLKQLCNQINELKELQKTFEISIGRKDEVISSLSHAIGKQKEKIELMRTFFHWRIGHVR 236
A ++ ++ L++LQ+ E RK + + L A Q++ L++ R R
Sbjct: 341 AAKEE---ELLRLQQLQEEKE----RKLQELELLQEA---QRQAERLLQEEEERRRSQHR 390
Query: 237 ARQDVYEGKLADQYYQRTLLKKVWKVWRSV-------------VQKQWKDVVERACQARA 283
Q EG+L + R ++ ++ +Q++ ++ ++ +AR
Sbjct: 391 ELQQALEGQLREAEQARASMQAEMELKEEEAARQRQRIKELEEMQQRLQEALQLEVKARR 450
Query: 284 EEVCIQISN-----DYEAKVAMLSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALN 338
+E ++I+ + E K+ L E + I+R Q EKE + M + R +
Sbjct: 451 DEESVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQEKEELQQEMAQQ-SRSLQQAQ 509
Query: 339 LEAMTIFQNRN--DAGIDSTNNKKEEYGPGVQ--GKEHSAHLDPSAPPMPLPVTS 389
+ + QNR D +++ K + V+ + + + P P PVTS
Sbjct: 510 QQLEEVRQNRQRADEDVEAAQRKLRQASTNVKHWNVQMNRLMHPIEPGDKRPVTS 564
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 36.6 bits (83), Expect = 0.061
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 18/176 (10%)
Query: 376 LDPSAPPMPLPVTSPLL-----------PSPPAAVGGASATAVPSAASMTSTRAASASSV 424
++P PP+PLP S L P PP G A P A+++ + +A+ S +
Sbjct: 1818 VEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPG---PLAQPQASALATVKASIISEL 1874
Query: 425 HVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIM 484
+ G SAA A + R + + + + R + R+S
Sbjct: 1875 SSKLQQFGGSSAAGGA---LPWARGGSGGGGDSHHGGASYVPERTSSLQRQRLSDDSQSS 1931
Query: 485 GVSPPMSSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSL 540
+S P+SS+ P + +P T P +++ ++ S T + H Q +
Sbjct: 1932 LLSKPVSSLFQNWPKP-PLPPLPTGTGVSPTAAAAPGATSPSASSSSTSTRHLQGV 1986
Score = 33.5 bits (75), Expect = 0.52
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 381 PPMPLPVT----SPLLPSPPAAVGGASATAVPSAASMTS 415
PP PLP T +PL P PP AV A T +A+S+TS
Sbjct: 1588 PPHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTS 1626
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.125 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,692,978
Number of Sequences: 37866
Number of extensions: 955055
Number of successful extensions: 7441
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 6448
Number of HSP's gapped (non-prelim): 1175
length of query: 550
length of database: 18,247,518
effective HSP length: 107
effective length of query: 443
effective length of database: 14,195,856
effective search space: 6288764208
effective search space used: 6288764208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.