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Search of human proteins with 150170694
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150170694 hypothetical protein LOC400451 [Homo sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150170694 hypothetical protein LOC400451 [Homo sapiens] 311 2e-85
gi|38348322 family with sequence similarity 174, member A [Homo ... 70 8e-13
gi|82546824 forkhead box K1 [Homo sapiens] 44 8e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 38 0.003
gi|171543895 ataxin 2 [Homo sapiens] 36 0.012
gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.021
gi|189339239 hypothetical protein LOC55009 [Homo sapiens] 35 0.021
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 35 0.027
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.027
gi|16753207 ubiquilin 2 [Homo sapiens] 35 0.035
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 35 0.035
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 35 0.035
gi|239741968 PREDICTED: hypothetical protein [Homo sapiens] 34 0.046
gi|38788260 bromodomain PHD finger transcription factor isoform ... 34 0.046
gi|38788274 bromodomain PHD finger transcription factor isoform ... 34 0.046
gi|5031805 insulin receptor substrate 1 [Homo sapiens] 34 0.060
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 34 0.060
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 34 0.060
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 34 0.060
gi|87299628 biorientation of chromosomes in cell division 1-like... 34 0.060
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 34 0.060
gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo ... 33 0.079
gi|239740786 PREDICTED: hypothetical protein [Homo sapiens] 33 0.079
gi|239740731 PREDICTED: hypothetical protein [Homo sapiens] 33 0.079
gi|55925576 insulin-like growth factor binding protein 2, 36kDa ... 33 0.10
gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens] 33 0.10
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 33 0.10
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 33 0.10
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 33 0.10
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 33 0.10
>gi|150170694 hypothetical protein LOC400451 [Homo sapiens]
Length = 159
Score = 311 bits (796), Expect = 2e-85
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MRAVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSG 60
MRAVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSG
Sbjct: 1 MRAVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSG 60
Query: 61 AAGGSGSSSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRL 120
AAGGSGSSSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRL
Sbjct: 61 AAGGSGSSSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRL 120
Query: 121 KKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVFDIKYR 159
KKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVFDIKYR
Sbjct: 121 KKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVFDIKYR 159
>gi|38348322 family with sequence similarity 174, member A [Homo
sapiens]
Length = 190
Score = 70.1 bits (170), Expect = 8e-13
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 6 LPAPLLPLLLLALLAAPAA----RASRAESVSAPWPEPERESRPPPGPGPGNTTRFG-SG 60
L A +L LLLL L+ P A A A + P P P PPGP P G +
Sbjct: 13 LLASVLLLLLLPELSGPLAVLLQAAEAAPGLGPPDPRPRTLPPLPPGPTPAQQPGRGLAE 72
Query: 61 AAGGSGSSSSNSS---------------GDALV---TRISILLRDLPTLKAAVIVAFAFT 102
AAG GS N S G+ V +S D P + A+ V +
Sbjct: 73 AAGPRGSEGGNGSNPVAGLETDDHGGKAGEGSVGGGLAVSPNPGDKPMTQRALTVLMVVS 132
Query: 103 TLLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPLNEEDDEDEDSTVFDIKY 158
++ ++R R +R +KTR+Y ++ T E +E+ PL E+DDED+D+T+FD +
Sbjct: 133 GAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPL-EQDDEDDDNTLFDANH 187
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 43.5 bits (101), Expect = 8e-05
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 15 LLALLAAP------AARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSS 68
LLAL +AP AA A+ A +AP P P + +PPPGP P GA G+GSS
Sbjct: 13 LLALRSAPCSPVLCAAAAAAAFPAAAPPPAPA-QPQPPPGPPPPPPPPLPPGAIAGAGSS 71
Query: 69 --SSNSSGDALV 78
SS SGD+ V
Sbjct: 72 GGSSGVSGDSAV 83
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 8 APLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGS--GAAGGS 65
AP P+L A AA A+ + + P P P PPP PG GS G++G S
Sbjct: 19 APCSPVLCAAAAAAAFPAAAPPPAPAQPQPPPGPPPPPPPPLPPGAIAGAGSSGGSSGVS 78
Query: 66 GSSSSNSSGDALVTRISILLRDLP 89
G S+ + ALV + +R P
Sbjct: 79 GDSAVAGAAPALVAAAAASVRQSP 102
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 38.1 bits (87), Expect = 0.003
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 6 LPAPLLPLLLLALLAAPAAR------ASRAESVSAPWPEPERESRP-PPGPGPGNTTRFG 58
+PAP P L A+PA A A++V+ P P ++P PP P G
Sbjct: 343 VPAPAAPPSALGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGG 402
Query: 59 SGAAGGSGSSSSNSSGDA 76
SG G S SS+S++ G A
Sbjct: 403 SGGGGSSSSSNSSAGGGA 420
Score = 26.6 bits (57), Expect = 9.6
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 39 PERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVTRISILLRDLPT 90
P PPP + +GA G + S +NS G +L+ + + PT
Sbjct: 458 PSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPSSPT 509
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 36.2 bits (82), Expect = 0.012
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 19 LAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSG 74
L PA R+ R +AP P P + PPPGPGP + + +A S+ N G
Sbjct: 31 LQRPARRSGRGGGGAAPGPYPSA-APPPPGPGPPPSRQSSPPSASDCFGSNGNGGG 85
Score = 26.6 bits (57), Expect = 9.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 38 EPERESRPPPGPG----PGNTTRFGSGAAGGSGSSSSNSSGDA 76
+ +++ +PPP PG + S AA S SSSS SS A
Sbjct: 182 QQQQQQQPPPAAANVRKPGGSGLLASPAAAPSPSSSSVSSSSA 224
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 35.4 bits (80), Expect = 0.021
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 3 AVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAA 62
A P PAP P A A PAA A+RA P P P PGPGPG G GAA
Sbjct: 148 AGPEPAPAGP----AKPAGPAALAARAGPGPGPGPGPG------PGPGPGKPA--GPGAA 195
Query: 63 GG-SGSSSSNSSGDALVTRISIL 84
+GS++ +S A +S++
Sbjct: 196 QTLNGSAALLNSHHAAAPAVSLV 218
Score = 28.9 bits (63), Expect = 1.9
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 4 VPLPAPLLPLLLLAL-----LAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFG 58
+PLP P P ++ AAP A A+ + +AP P + PPP P P R
Sbjct: 226 LPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPP-AAPAPAAPAAAPPPPPPAPATLARPP 284
Query: 59 SGAAG 63
AG
Sbjct: 285 GHPAG 289
>gi|189339239 hypothetical protein LOC55009 [Homo sapiens]
Length = 132
Score = 35.4 bits (80), Expect = 0.021
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 28/150 (18%)
Query: 6 LPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGS 65
L PLL LLL LLAA A A P R ++ P P T GA S
Sbjct: 6 LQPPLLLLLLALLLAALPCGAEEA--------SPLRPAQVTLSPPPAVTNGSQPGAPHNS 57
Query: 66 GSSSSNSSGDALVTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRLKKTRK 125
+ + + +TR + V F L L+R FR K + R+
Sbjct: 58 THTRPPGASGSALTR-------------SFYVILGFCGLTALYFLIRAFRLKK--PQRRR 102
Query: 126 YDIITTPAERVEMAPLNEEDDEDEDSTVFD 155
Y ++ + EMA L D DE+ TVF+
Sbjct: 103 YGLLANTEDPTEMASL----DSDEE-TVFE 127
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 35.0 bits (79), Expect = 0.027
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 7 PAPLLPLLLLALLAAPAAR-ASRAESVSAP--WPEPERESRPPPGPGPGNTTRFGSGAAG 63
PAP P + P R A ES AP WP + ES+P GPG G G+G G
Sbjct: 1031 PAP--PAAAATAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGAG-----GAGGTG 1083
Query: 64 GSGSSS 69
G+G +
Sbjct: 1084 GAGGGA 1089
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.0 bits (79), Expect = 0.027
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 3 AVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPG---PGPGNTTRFGS 59
+ P P P +P L A A P A A E+ EPE ++ PP P PG
Sbjct: 516 STPAPPPAVPKELPAPPAPPPASAPTPET------EPEEPAQAPPAQSTPTPGVAAAPTL 569
Query: 60 GAAGGSGSSSSNSSGDA 76
+ GGS SS+S+ S +A
Sbjct: 570 VSGGGSTSSTSSGSFEA 586
Score = 28.1 bits (61), Expect = 3.3
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 31 SVSAPWPEPERESRPP-PGPGPGNTTRFGSGAAGGSGSSSSNSSGD 75
S S+ P ER++R P PG G++ G GG G + GD
Sbjct: 1384 SFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGD 1429
Score = 27.7 bits (60), Expect = 4.3
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 22 PAARASRAESVSAPWPEPERESRPPPGPGPG 52
P R WP P+ SRPP PG
Sbjct: 1419 PGGRTGPGRGDKRSWPSPKNRSRPPEERPPG 1449
>gi|16753207 ubiquilin 2 [Homo sapiens]
Length = 624
Score = 34.7 bits (78), Expect = 0.035
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 26/123 (21%)
Query: 24 ARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVTRISI 83
+R + + PW PPP TT + GSG+SSSN++G+
Sbjct: 308 SRTENRDPLPNPWA-------PPPATQSSATTSTTTSTGSGSGNSSSNATGN-------- 352
Query: 84 LLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRSGKRLKKTRKYDIITTPAERVEMAPLNE 143
T+ AA VA F+T + LL ++ + + ++ ++++ P R M L++
Sbjct: 353 ------TVAAANYVASIFSTPGMQSLLQQITENPQLIQ-----NMLSAPYMRSMMQSLSQ 401
Query: 144 EDD 146
D
Sbjct: 402 NPD 404
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 34.7 bits (78), Expect = 0.035
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 2 RAVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGA 61
RA P+PAP L L A + AS S + P PE E RPP P + F G+
Sbjct: 919 RASPVPAPSSGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSKGS 978
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
sapiens]
Length = 735
Score = 34.7 bits (78), Expect = 0.035
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 37 PEPERESRPP----PGPGPGNTTRFGSGAAGGSGSS----SSNSSGDALVTRISILLRDL 88
P PE + RPP PGP PG+ G G + +S +S + R+SI ++ L
Sbjct: 114 PIPEEDPRPPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPARRLSIKMKKL 173
Query: 89 PTLK 92
P L+
Sbjct: 174 PELR 177
>gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 34.3 bits (77), Expect = 0.046
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 3 AVPLPAPLLPLLLLALLAAPAARASRAESVSAPWPEPERESR---PPPGPGPGNTTRFGS 59
A P PA LLPL + A AA R R E+ + P P R R P PG P G
Sbjct: 176 ASPAPARLLPLAVGASAAAGDTR--RTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGG 233
Query: 60 GAAGGSGSSSSNSSG 74
AGG+ + +G
Sbjct: 234 RRAGGARAGQGAHTG 248
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 34.3 bits (77), Expect = 0.046
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 20 AAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVT 79
AA A A + S R PPP P P +T+ G G GG G + G +
Sbjct: 53 AAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLA 112
Query: 80 RISILLR 86
R + R
Sbjct: 113 RTTAARR 119
Score = 26.6 bits (57), Expect = 9.6
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 19 LAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGG 64
L++P +S P P P S P G G R G G GG
Sbjct: 64 LSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGG 109
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 34.3 bits (77), Expect = 0.046
Identities = 20/67 (29%), Positives = 26/67 (38%)
Query: 20 AAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVT 79
AA A A + S R PPP P P +T+ G G GG G + G +
Sbjct: 53 AAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLA 112
Query: 80 RISILLR 86
R + R
Sbjct: 113 RTTAARR 119
Score = 26.6 bits (57), Expect = 9.6
Identities = 15/46 (32%), Positives = 18/46 (39%)
Query: 19 LAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGG 64
L++P +S P P P S P G G R G G GG
Sbjct: 64 LSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGG 109
>gi|5031805 insulin receptor substrate 1 [Homo sapiens]
Length = 1242
Score = 33.9 bits (76), Expect = 0.060
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 40 ERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGD 75
E S P GNT FG+GAA G G SS+SS D
Sbjct: 1102 ETFSSTPSATRVGNTVPFGAGAAVGGGGGSSSSSED 1137
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 33.9 bits (76), Expect = 0.060
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 21 APAARA---SRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGAAGG 64
AP AR RAE S R +RPPP PGPG +R A G
Sbjct: 215 APPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAG 261
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 33.9 bits (76), Expect = 0.060
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 22 PAARASRAESVSAPWPEPERESRPP---PGP-GPGNTTRFGSGAAGGSGSSSSNSSGDAL 77
PA A + AP R+SRP PGP GPG +R GSG + ++ S L
Sbjct: 6 PAGSPLSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARERSRVQTL 65
Query: 78 VTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRS 116
L R LP++ ++ LL + + RS
Sbjct: 66 RHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRS 104
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 33.9 bits (76), Expect = 0.060
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 22 PAARASRAESVSAPWPEPERESRPP---PGP-GPGNTTRFGSGAAGGSGSSSSNSSGDAL 77
PA A + AP R+SRP PGP GPG +R GSG + ++ S L
Sbjct: 6 PAGSPLSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAARERSRVQTL 65
Query: 78 VTRISILLRDLPTLKAAVIVAFAFTTLLIACLLLRVFRS 116
L R LP++ ++ LL + + RS
Sbjct: 66 RHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRS 104
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.9 bits (76), Expect = 0.060
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 34 APWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALV 78
AP P P + PP P PG G+G AGG+G+ + + A++
Sbjct: 13 APPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAGAGDPQLVAMI 57
Score = 31.2 bits (69), Expect = 0.39
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 35 PWPEPERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVTRI 81
P P+P+ + PPP PGPG G GA GG+G + + + LV I
Sbjct: 17 PPPQPQPQPPPPP-PGPGA----GPGA-GGAGGAGAGAGDPQLVAMI 57
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 33.9 bits (76), Expect = 0.060
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 3 AVPLP-APLLPLLLLALLAAPAARASRAESVSAPWPEPERESRPPPGPGPGNTTRFGSGA 61
A P P AP P L LL APA + + P P + + PG + + A
Sbjct: 54 AAPAPGAPSPPATLAHLLPAPAMYSLLETELKNPVGTPTQAAGTGGPAAPGGAGKSSANA 113
Query: 62 AGGSGSSSSNSSG 74
AGG+ S +S G
Sbjct: 114 AGGANSGGGSSGG 126
>gi|239740906 PREDICTED: hypothetical protein XP_002344082 [Homo
sapiens]
Length = 138
Score = 33.5 bits (75), Expect = 0.079
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 10 LLPLLLLALLAAPAARASRAESVSAP---WPEPERESRP---PPGPGPGNTTRFGSGAAG 63
+ P + + AP + + AP WP+PERE +P PP PG G G++G
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 64 GSGSSSSNS 72
+ +S S
Sbjct: 61 PAPPPASPS 69
>gi|239740786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 33.5 bits (75), Expect = 0.079
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 10 LLPLLLLALLAAPAARASRAESVSAP---WPEPERESRP---PPGPGPGNTTRFGSGAAG 63
+ P + + AP + + AP WP+PERE +P PP PG G G++G
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 64 GSGSSSSNS 72
+ +S S
Sbjct: 61 PAPPPASPS 69
>gi|239740731 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 33.5 bits (75), Expect = 0.079
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 10 LLPLLLLALLAAPAARASRAESVSAP---WPEPERESRP---PPGPGPGNTTRFGSGAAG 63
+ P + + AP + + AP WP+PERE +P PP PG G G++G
Sbjct: 1 MTPQVAVLAAVAPVVASVYLPAPRAPFELWPDPEREGQPPHLPPTPGSLGLPGSGHGSSG 60
Query: 64 GSGSSSSNS 72
+ +S S
Sbjct: 61 PAPPPASPS 69
>gi|55925576 insulin-like growth factor binding protein 2, 36kDa
[Homo sapiens]
Length = 328
Score = 33.1 bits (74), Expect = 0.10
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 3 AVPLPAP----LLPLLLLALLAAPAARASRAESV-SAPWPEPERESR--PPPGPGPGNTT 55
A+PLP P LLPLLLL L A+ +RAE + P PER + PPP P
Sbjct: 9 ALPLPPPPLLPLLPLLLLLLGASGGGGGARAEVLFRCPPCTPERLAACGPPPVAPPAAVA 68
Query: 56 RFGSGA 61
GA
Sbjct: 69 AVAGGA 74
>gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens]
Length = 480
Score = 33.1 bits (74), Expect = 0.10
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 8 APLLPLLLLALLAAPA----ARASRAESVSAPWPEPERESRPPPGP 49
A LLPLLLL LLAAPA +RA R+ ++A P+ +R PP P
Sbjct: 6 AALLPLLLL-LLAAPASAQLSRAGRSAPLAAGCPDRCEPARCPPQP 50
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 33.1 bits (74), Expect = 0.10
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 39 PERESRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGDALVTRISILLRD 87
P +ES P GP P GSG++ S SSS +S L +++++L+R+
Sbjct: 797 PPKESAPSSGPPPKPPVSSGSGSS--SSSSSCSSRKVKLQSKVAVLIRE 843
Score = 26.6 bits (57), Expect = 9.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 21 APAARASRAESVSAPWPEPERESRPPPGPGP 51
AP S A S +P P S PPP P P
Sbjct: 185 APPPAPSSASSSPSPSPSSSSPSPPPPPPPP 215
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 33.1 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 43 SRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGD 75
+ PPP G ++ G G+ SGSS S S+GD
Sbjct: 230 TNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGD 262
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 33.1 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 43 SRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGD 75
+ PPP G ++ G G+ SGSS S S+GD
Sbjct: 230 TNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGD 262
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 33.1 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 43 SRPPPGPGPGNTTRFGSGAAGGSGSSSSNSSGD 75
+ PPP G ++ G G+ SGSS S S+GD
Sbjct: 230 TNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGD 262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,377,972
Number of Sequences: 37866
Number of extensions: 443098
Number of successful extensions: 7923
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 6066
Number of HSP's gapped (non-prelim): 1823
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.