Guide to the Human Genome
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Name: FAM174B Sequence: fasta or formatted (159aa) NCBI GI: 150170694
Description:

hypothetical protein LOC400451

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.6         20           2
 C cysteine            0.6          1           1
 D aspartate           5.0          8           2
 E glutamate           6.3         10           2
 F phenylalanine       3.1          5           1
 G glycine             6.3         10           2
 H histidine           0.0          0           0
 I isoleucine          4.4          7           2
 K lysine              3.8          6           2
 L leucine            13.2         21           4
 M methionine          1.3          2           1
 N asparagine          1.9          3           1
 P proline            10.1         16           3
 Q glutamine           0.0          0           0
 R arginine            8.8         14           1
 S serine              9.4         15           4
 T threonine           6.3         10           2
 V valine              5.0          8           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC400451 
FAM174A               0.157   family with sequence similarity 174, member A 
FOXK1                 0.066   forkhead box K1 
CNOT3                 0.045   CCR4-NOT transcription complex, subunit 3 
ATXN2                 0.038   ataxin 2 
TAF4                  0.035   TBP-associated factor 4 
C19orf24              0.035   hypothetical protein LOC55009 
GRIN2D                0.035   N-methyl-D-aspartate receptor subunit 2D precursor ...
BAT2                  0.035   HLA-B associated transcript-2 
UBQLN2                0.035   ubiquilin 2 
KIAA1522              0.035   hypothetical protein LOC57648 
SYDE1                 0.035   synapse defective 1, Rho GTPase, homolog 1 
LOC100132345          0.031   PREDICTED: hypothetical protein 
BPTF                  0.031   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.031   bromodomain PHD finger transcription factor isoform ...
IRS1                  0.031   insulin receptor substrate 1 
LOC100127891          0.031   PREDICTED: hypothetical protein 
LOC100129654          0.031   PREDICTED: similar to transcription factor 23 [Homo...
LOC100129654          0.031   PREDICTED: similar to transcription factor 23 [Homo...
BOD1L                 0.031   biorientation of chromosomes in cell division 1-like...
SOX3                  0.031   SRY (sex determining region Y)-box 3 
LOC100294312          0.028   PREDICTED: hypothetical protein XP_002344082 
LOC100294220          0.028   PREDICTED: hypothetical protein 
LOC100294184          0.028   PREDICTED: hypothetical protein 
IGFBP2                0.028   insulin-like growth factor binding protein 2, 36kDa ...
HTRA1                 0.028   HtrA serine peptidase 1 precursor 
SCAF1                 0.028   SR-related CTD-associated factor 1 
DMKN                  0.028   dermokine isoform 4 precursor 
DMKN                  0.028   dermokine isoform 5 precursor 
DMKN                  0.028   dermokine isoform 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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