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Search of human proteins with 150170658
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150170658 hypothetical protein LOC137392 [Homo sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150170658 hypothetical protein LOC137392 [Homo sapiens] 563 e-161
gi|38348294 hypothetical protein LOC339145 [Homo sapiens] 241 7e-64
gi|23111038 sorting nexin 2 [Homo sapiens] 44 2e-04
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 44 2e-04
gi|8923904 bridging integrator 3 [Homo sapiens] 39 0.004
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 39 0.007
gi|196115290 glial fibrillary acidic protein isoform 2 [Homo sap... 37 0.020
gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens] 37 0.020
gi|58530840 desmoplakin isoform I [Homo sapiens] 37 0.020
gi|156104874 envoplakin [Homo sapiens] 35 0.059
gi|22748643 chromatin modifying protein 4C [Homo sapiens] 35 0.077
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.077
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 35 0.10
gi|42794779 myosin 18A isoform b [Homo sapiens] 35 0.10
gi|194272228 leucine rich repeat containing 48 isoform b [Homo s... 34 0.17
gi|194272226 leucine rich repeat containing 48 isoform b [Homo s... 34 0.17
gi|194272224 leucine rich repeat containing 48 isoform a [Homo s... 34 0.17
gi|194272222 leucine rich repeat containing 48 isoform a [Homo s... 34 0.17
gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens] 34 0.17
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 33 0.22
gi|170650672 Leber congenital amaurosis 5 [Homo sapiens] 33 0.22
gi|170650670 Leber congenital amaurosis 5 [Homo sapiens] 33 0.22
gi|40807469 TRAF interacting protein [Homo sapiens] 33 0.29
gi|33946313 ninein isoform 4 [Homo sapiens] 33 0.29
gi|33946321 ninein isoform 5 [Homo sapiens] 33 0.29
gi|148536871 ninein isoform 1 [Homo sapiens] 33 0.29
gi|148536869 ninein isoform 2 [Homo sapiens] 33 0.29
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 33 0.29
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 33 0.29
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 33 0.38
>gi|150170658 hypothetical protein LOC137392 [Homo sapiens]
Length = 289
Score = 563 bits (1452), Expect = e-161
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MMRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAA 60
MMRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAA
Sbjct: 1 MMRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAA 60
Query: 61 TETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTAR 120
TETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTAR
Sbjct: 61 TETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTAR 120
Query: 121 NREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKDI 180
NREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKDI
Sbjct: 121 NREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKDI 180
Query: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRAN 240
KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRAN
Sbjct: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRAN 240
Query: 241 SKSPLQRSLSAKCVSGTGQVSTCRLRKDQQAEDDEDDELDVTEEENFLK 289
SKSPLQRSLSAKCVSGTGQVSTCRLRKDQQAEDDEDDELDVTEEENFLK
Sbjct: 241 SKSPLQRSLSAKCVSGTGQVSTCRLRKDQQAEDDEDDELDVTEEENFLK 289
>gi|38348294 hypothetical protein LOC339145 [Homo sapiens]
Length = 304
Score = 241 bits (614), Expect = 7e-64
Identities = 125/265 (47%), Positives = 181/265 (68%), Gaps = 6/265 (2%)
Query: 8 NRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLK 67
+R++Q + ++ V+N EK+FG+ C + AAY RKTARLRDKAD LV ++ +A +E P L+
Sbjct: 6 SRDSQVRVMENTVANTEKYFGQFCSLLAAYTRKTARLRDKADQLVKQLIDFANSENPELR 65
Query: 68 LGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQL 127
+ FA++ AK+QDYRQA+VERLE KVV PLK YG +K R ++K +N E KQL
Sbjct: 66 ATMRGFAEDLAKVQDYRQAQVERLETKVVNPLKLYGAQIKQTRAEIKKFKHVQNHEIKQL 125
Query: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKDIKTIFSEF 187
+LE+ RQ++PSD+ +ISQAET +QRAA+D+SRT+ LEET++ F+RQK+KD++ F +F
Sbjct: 126 EKLEKLRQKSPSDQQMISQAETRVQRAAVDSSRTTLQLEETVDGFQRQKLKDLQKFFCDF 185
Query: 188 ITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYA--PDYSSRLDIVRANSKSPL 245
+TIEM+FH KA+EVY++A+Q ++ D + DL FR + Y +RL AN+ SP
Sbjct: 186 VTIEMVFHAKAVEVYSSAFQTLEKYDLERDLLDFRAKMQGVYGHYDTRL---LANT-SPP 241
Query: 246 QRSLSAKCVSGTGQVSTCRLRKDQQ 270
L + GT QV R +D +
Sbjct: 242 PSVLQSLASQGTLQVQLSRANEDPE 266
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 43.5 bits (101), Expect = 2e-04
Identities = 41/190 (21%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 3 RRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKAD--LLVNEINAYAA 60
++ EN + Q ++L +V + H EL AA+ + A L + D L ++ A
Sbjct: 310 QQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAE 369
Query: 61 TETPHLKLGLMNFADEFAKLQDYRQ--AEVERLEAKVVEPLKTYGTIVKMKRDDLKATLT 118
E K+ ++ FA + + ++ RL A V+ + + K +D + TL
Sbjct: 370 VEE---KIDQLHQEQAFADFYMFSELLSDYIRLIA-AVKGVFDHRMKCWQKWEDAQITLL 425
Query: 119 ARNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMK 178
+ REA+ + + ++ I + E ++Q+ D + S+ + + + FE++++K
Sbjct: 426 -KKREAEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVK 484
Query: 179 DIKTIFSEFI 188
D KT+ +++
Sbjct: 485 DFKTVIIKYL 494
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 17/190 (8%)
Query: 2 MRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRK---TARLRDKADLLVNEINAY 58
+R+T E N ++L+T+ SNVE++ + + + ++ T +R ++ + E
Sbjct: 941 LRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKE---- 996
Query: 59 AATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLT 118
+A L+ LM E +LQD ++ +E +E ++ E KT ++ ++ L+ T
Sbjct: 997 SAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRAST 1056
Query: 119 A------RNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMD----ASRTSRHLEET 168
A R+ ++ ++ Q ++ A+ E +AA + + +HLEET
Sbjct: 1057 ALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEET 1116
Query: 169 INNFERQKMK 178
E Q ++
Sbjct: 1117 TQKAESQLLE 1126
Score = 35.0 bits (79), Expect = 0.077
Identities = 61/327 (18%), Positives = 125/327 (38%), Gaps = 53/327 (16%)
Query: 1 MMRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAA 60
M+R E +Q+Q V +E L + A K+ L+ + LL ++ + A
Sbjct: 1278 MLREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVKRWKA 1337
Query: 61 TETPHLKLGLMNFADEFAKLQDYRQA----------EVERLEAKV-------------VE 97
+ +E+ KL ++ E+ RL+A++ ++
Sbjct: 1338 RNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQ 1397
Query: 98 PLKTYGTIVKMKRDDLKATLTAR----NREAKQLTQLERTRQRNPSDRHVISQAETELQR 153
LK V+ +++ ++ L A+ + K +TQ+++ +R + + + ++
Sbjct: 1398 SLKEDLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDKVME 1457
Query: 154 AAMDASRTSRHLEETINNFERQKMKDI--------KTIFSEFITIEMLFHGKALEVYTAA 205
+ A + H E+ ++ E Q++K+ K++ S+ ++ K E
Sbjct: 1458 TS--AQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKETEARNLQ 1515
Query: 206 YQNIQNIDE----DEDL-------EVFRNSLYAPDYSSRLDIVRANSKSPLQRSLSAKCV 254
Q +Q E +DL E R + + +R IV A SK + +
Sbjct: 1516 EQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAKSKIAHLAGVKDQLT 1575
Query: 255 SGTGQVSTCRLRKDQQAEDDEDDELDV 281
+ L++ A D + DELDV
Sbjct: 1576 KENEE-----LKQRNGALDQQKDELDV 1597
>gi|8923904 bridging integrator 3 [Homo sapiens]
Length = 253
Score = 39.3 bits (90), Expect = 0.004
Identities = 37/204 (18%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 2 MRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAAT 61
+ R E + +QL+ ++K + A + ++ DLL N +
Sbjct: 20 VERDFEREYGKLQQLEEQTRRLQKDMKKSTDADLAMSKSAVKI--SLDLLSNPL-----C 72
Query: 62 ETPHLKLGLMNFADEFAKLQD-YRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTAR 120
E L ++ D K D + Q +V +++ V+EPLK +G++ +K A
Sbjct: 73 EQDQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKKFGSVFPSLNMAVKRREQAL 132
Query: 121 NREAKQLTQLERTRQRNPSDRHV--ISQAETELQRAAMDASRTSRHLEETINNFERQKMK 178
+ ++E+ ++ + + + QA EL+ D +R L E + F ++
Sbjct: 133 QDYRRLQAKVEKYEEKEKTGPVLAKLHQAREELRPVREDFEAKNRQLLEEMPRFYGSRLD 192
Query: 179 DIKTIFSEFITIEMLFHGKALEVY 202
+ F I +++++ + +++
Sbjct: 193 YFQPSFESLIRAQVVYYSEMHKIF 216
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 38.5 bits (88), Expect = 0.007
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 2 MRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAAT 61
+ R LEN Q Q+ + ++ HF + C+ R ADL ++E+ +A
Sbjct: 405 LTRELENGEKQQLQMLDRLKEIQNHF-DTCE----------AERKHADLQISELTRHAED 453
Query: 62 ETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARN 121
T + L A L++ + E L+ K E ++ + K+K L+ L ++
Sbjct: 454 ATKQAERYLSELQQSEA-LKEEAEKRREDLKLKAQESIRQW----KLKHKKLERALEKQS 508
Query: 122 REAKQLT----QLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKM 177
+LT Q+ + + + + Q L++ D T R L+E + + +K+
Sbjct: 509 ETVDELTGKNNQILKEKDELKTQLYAALQQIENLRKELNDV-LTKRALQEEELHSKEEKL 567
Query: 178 KDIKT 182
+DIK+
Sbjct: 568 RDIKS 572
>gi|196115290 glial fibrillary acidic protein isoform 2 [Homo
sapiens]
Length = 431
Score = 37.0 bits (84), Expect = 0.020
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 29 ELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLMNFADEFAKLQDYRQAEV 88
EL FA+Y+ K L + L E+N A E KL D QAE+
Sbjct: 75 ELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEP--------------TKLADVYQAEL 120
Query: 89 ERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAE 148
L + ++ L ++++RD+L L ++ + T L + N + Q
Sbjct: 121 RELRLR-LDQLTANSARLEVERDNLAQDLATVRQKLQDETNLRLEAENNLA---AYRQEA 176
Query: 149 TELQRAAMDASRTSRHLEETINNFERQKMKDIKTI 183
E A +D R LEE I + ++++ +
Sbjct: 177 DEATLARLDLERKIESLEEEIRFLRKIHEEEVREL 211
>gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens]
Length = 432
Score = 37.0 bits (84), Expect = 0.020
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 18/155 (11%)
Query: 29 ELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLMNFADEFAKLQDYRQAEV 88
EL FA+Y+ K L + L E+N A E KL D QAE+
Sbjct: 75 ELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEP--------------TKLADVYQAEL 120
Query: 89 ERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAE 148
L + ++ L ++++RD+L L ++ + T L + N + Q
Sbjct: 121 RELRLR-LDQLTANSARLEVERDNLAQDLATVRQKLQDETNLRLEAENNLA---AYRQEA 176
Query: 149 TELQRAAMDASRTSRHLEETINNFERQKMKDIKTI 183
E A +D R LEE I + ++++ +
Sbjct: 177 DEATLARLDLERKIESLEEEIRFLRKIHEEEVREL 211
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 37.0 bits (84), Expect = 0.020
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 84 RQAEVERLEAKVVEPLKTYGTI-VKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRH 142
R+ ++E +E + V ++T ++ K DD T+ +N+E ++L QL + +DR
Sbjct: 1443 RKQQLE-VELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLI---DKETNDRK 1498
Query: 143 VISQAETELQRAAMDASRTSRHLEETINNFERQKMK 178
+ LQR D + + ETIN + Q+ +
Sbjct: 1499 CLEDENARLQRVQYDLQKANSSATETINKLKVQEQE 1534
>gi|156104874 envoplakin [Homo sapiens]
Length = 2033
Score = 35.4 bits (80), Expect = 0.059
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 85 QAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTAR-----NRE--AKQLTQLERTRQRN 137
Q +++ L+ + Y ++++++D + AR NRE A+Q + E R R
Sbjct: 1503 QVQIDVLQKAKSQEKTIYKEVIRVQKDRVLEDERARVWEMLNRERTARQAREEEARRLRE 1562
Query: 138 PSDR-----HVISQAETELQRAAMDASRTSRHLEETINNFERQKMK 178
DR S+ E+ELQRA A + L++ + ERQK +
Sbjct: 1563 RIDRAETLGRTWSREESELQRARDQADQECGRLQQELRALERQKQQ 1608
>gi|22748643 chromatin modifying protein 4C [Homo sapiens]
Length = 233
Score = 35.0 bits (79), Expect = 0.077
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 59 AATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLT 118
AA + L + K Q+Y + ++R A K +GT + KR L+A L
Sbjct: 18 AAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALA----KKHGT--QNKRAALQA-LK 70
Query: 119 ARNREAKQLTQLERTRQRNPSDRHVI--SQAETELQRAAMDASRTSRHLEETINNFERQK 176
+ R KQLTQ++ T R + S TE+ R A++ + + E N + K
Sbjct: 71 RKKRFEKQLTQIDGTLSTIEFQREALENSHTNTEVLRNMGFAAKAMKSVHE---NMDLNK 127
Query: 177 MKDIKTIFSEFITIEMLFHGKALEVYTAAYQNI---QNIDEDEDLEVFRNSLYAPDYSSR 233
+ D+ +E I A E+ A Q + + DEDE L L + + +
Sbjct: 128 IDDLMQEITEQQDI-------AQEISEAFSQRVGFGDDFDEDE-LMAELEELEQEELNKK 179
Query: 234 LDIVRANSKSPLQRSLSAKCVSGTGQVSTCRLRK---DQQAEDDEDD 277
+ +R + SL A+ G ST R + Q+AE+++DD
Sbjct: 180 MTNIRLPNVP--SSSLPAQPNRKPGMSSTARRSRAASSQRAEEEDDD 224
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.0 bits (79), Expect = 0.077
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 18/195 (9%)
Query: 7 ENRNA--QTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETP 64
EN+ A +T QL + ++K + ++V+ + L++ D +V + Y E
Sbjct: 2430 ENKKAVDKTNQLMETLKTIKKENIQQKAQLDSFVKSMSSLQNDRDRIVGD---YQQLEER 2486
Query: 65 HLKLGL------MNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLT 118
HL + L A E KL++ + ++ E K +++ R+DL +T
Sbjct: 2487 HLSIILEKDQLIQEAAAENNKLKEEIRGLRSHMDDLNSENAKLDAELIQY-REDLNQVIT 2545
Query: 119 ARNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMK 178
++ + KQL +++ + + +++ +L+ ++ + L + N + +K
Sbjct: 2546 IKDSQQKQLLEVQLQQNKELENKY------AKLEEKLKESEEANEDLRRSFNALQEEKQD 2599
Query: 179 DIKTIFSEFITIEML 193
K I S ++I L
Sbjct: 2600 LSKEIESLKVSISQL 2614
Score = 33.1 bits (74), Expect = 0.29
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 59 AATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLT 118
A E LKL L E A + Q E++++E + + P+K +K+ +D
Sbjct: 569 AQEEIAFLKLQLQGKRAEEADHEVLDQKEMKQMEGEGIAPIK-----MKVFLEDTGQDFP 623
Query: 119 ARNREAKQLTQLERTR-----QRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFE 173
E L +E+ + Q S+ ++ A EL+ D ++ + + I
Sbjct: 624 LMPNEESSLPAVEKEQASTEHQSRTSEEISLNDAGVELKSTKQDGDKSLSAVPD-IGQCH 682
Query: 174 RQKMKDIKTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDE 214
+ +++ +K S+ + +E+ FH KA E+Y +N+DE
Sbjct: 683 QDELERLK---SQILELELNFH-KAQEIYE------KNLDE 713
Score = 31.6 bits (70), Expect = 0.85
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 28/192 (14%)
Query: 10 NAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYA-----ATETP 64
N + K++Q N++ +L AA+ + + L+D D +++E + A ++
Sbjct: 2167 NKKDKEVQQLQENLDSTVTQL----AAFTKSMSSLQDDRDRVIDEAKKWERKFSDAIQSK 2222
Query: 65 HLKLGLMNFADEFAKLQDY-RQAEVERLEAKV-VEPLKTYGTIVKMK-------RDDLKA 115
++ L D + L+D RQ + E K+ + L+ I + K + +
Sbjct: 2223 EEEIRLKE--DNCSVLKDQLRQMSIHMEELKINISRLEHDKQIWESKAQTEVQLQQKVCD 2280
Query: 116 TLTARNREAKQLTQLERTRQRNPSDRHVISQAETELQR---AAMDASRTSRHLEETINNF 172
TL N+E L+QLE TR S ++ +++ E+EL+ D S + +E N
Sbjct: 2281 TLQGENKEL--LSQLEETRHLYHSSQNELAKLESELKSLKDQLTDLSNSLEKCKEQKGNL 2338
Query: 173 E---RQKMKDIK 181
E RQ+ DI+
Sbjct: 2339 EGIIRQQEADIQ 2350
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 34.7 bits (78), Expect = 0.10
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 155 AMDASRTSRHLEETINNFERQKMKDIKTIFSEFITIEMLFHGKALEVYTAAYQNI----- 209
A + +++ HL E + E ++ I++ +S + MLF A Q +
Sbjct: 135 ARNIVQSTEHLHEDNGDVEVRRSCRIRSRYSG-VNQSMLFDKLITNTAEAVLQKMDDMKK 193
Query: 210 ---QNIDEDEDLEVFRNSLYAPDYSSRLDIVRANSKSPLQRSLSAKCVSGTGQVSTCRLR 266
Q + E EDL VF + S L++ + +QR+ + G V +
Sbjct: 194 MRRQRMRELEDLGVFNET-----EESNLNMYTRGKQKDIQRTDEETTDNQEGSVESSEEG 248
Query: 267 KDQQAEDDEDDELDVTEEEN 286
+DQ+ EDD +DE D ++++
Sbjct: 249 EDQEHEDDGEDEDDEDDDDD 268
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 34.7 bits (78), Expect = 0.10
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 82 DYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDR 141
++ + +V+RLE+ + LK + +RD + A NRE +Q +L+R + +
Sbjct: 1832 EFERTQVKRLES-LASRLKENMEKLTEERDQ---RIAAENREKEQNKRLQRQLRDTKEEM 1887
Query: 142 HVISQAETELQRAAMDASRTSRHLEETINNFE---RQKMKDIKTIFSEFITIEMLFHGKA 198
EL R +ASR LE + + E + D+K F K
Sbjct: 1888 -------GELARKEAEASRKKHELEMDLESLEAANQSLQADLKLAF------------KR 1928
Query: 199 LEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRANSKSPLQRSLS-AKCVSGT 257
+ AA ++ DE+EDL NS D S L+ KS L ++ +K S
Sbjct: 1929 IGDLQAAIEDEMESDENEDL---INSEGDSDVDSELEDRVDGVKSWLSKNKGPSKAASDD 1985
Query: 258 GQVSTC-------RLRKDQQAEDDEDDELDVTEEENF 287
G + + L D+ DDE D LD T +
Sbjct: 1986 GSLKSSSPTSYWKSLAPDR--SDDEHDPLDNTSRPRY 2020
>gi|194272228 leucine rich repeat containing 48 isoform b [Homo
sapiens]
Length = 457
Score = 33.9 bits (76), Expect = 0.17
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 71 MNFADEFAKLQDYRQAEVERLEAKVVEPLKT---YGTIVKMKRDDLKATLTARNREAKQL 127
+N + K Q+ R+ E++ V E ++ G K ++ + + RE +L
Sbjct: 285 VNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSSLSAIREELEL 344
Query: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKM-------KDI 180
+E+ +D + A L+ ++ LEETIN FER + +++
Sbjct: 345 PNIEKMILECSADISELFDALMTLEMQLVE------QLEETINMFERNIVDMVGLFIENV 398
Query: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDL 218
+++ ++ +E H K LE+ + + I D DEDL
Sbjct: 399 QSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDL 436
>gi|194272226 leucine rich repeat containing 48 isoform b [Homo
sapiens]
Length = 457
Score = 33.9 bits (76), Expect = 0.17
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 71 MNFADEFAKLQDYRQAEVERLEAKVVEPLKT---YGTIVKMKRDDLKATLTARNREAKQL 127
+N + K Q+ R+ E++ V E ++ G K ++ + + RE +L
Sbjct: 285 VNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSSLSAIREELEL 344
Query: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKM-------KDI 180
+E+ +D + A L+ ++ LEETIN FER + +++
Sbjct: 345 PNIEKMILECSADISELFDALMTLEMQLVE------QLEETINMFERNIVDMVGLFIENV 398
Query: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDL 218
+++ ++ +E H K LE+ + + I D DEDL
Sbjct: 399 QSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDL 436
>gi|194272224 leucine rich repeat containing 48 isoform a [Homo
sapiens]
Length = 523
Score = 33.9 bits (76), Expect = 0.17
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 71 MNFADEFAKLQDYRQAEVERLEAKVVEPLKT---YGTIVKMKRDDLKATLTARNREAKQL 127
+N + K Q+ R+ E++ V E ++ G K ++ + + RE +L
Sbjct: 285 VNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSSLSAIREELEL 344
Query: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKM-------KDI 180
+E+ +D + A L+ ++ LEETIN FER + +++
Sbjct: 345 PNIEKMILECSADISELFDALMTLEMQLVE------QLEETINMFERNIVDMVGLFIENV 398
Query: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDL 218
+++ ++ +E H K LE+ + + I D DEDL
Sbjct: 399 QSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDL 436
>gi|194272222 leucine rich repeat containing 48 isoform a [Homo
sapiens]
Length = 523
Score = 33.9 bits (76), Expect = 0.17
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 71 MNFADEFAKLQDYRQAEVERLEAKVVEPLKT---YGTIVKMKRDDLKATLTARNREAKQL 127
+N + K Q+ R+ E++ V E ++ G K ++ + + RE +L
Sbjct: 285 VNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSSLSAIREELEL 344
Query: 128 TQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKM-------KDI 180
+E+ +D + A L+ ++ LEETIN FER + +++
Sbjct: 345 PNIEKMILECSADISELFDALMTLEMQLVE------QLEETINMFERNIVDMVGLFIENV 398
Query: 181 KTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDL 218
+++ ++ +E H K LE+ + + I D DEDL
Sbjct: 399 QSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDL 436
>gi|55769583 progesterone-induced blocking factor 1 [Homo sapiens]
Length = 757
Score = 33.9 bits (76), Expect = 0.17
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 43 RLRDKADLLVNEINAYAATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTY 102
+LR+KA + + + TE ++KL F ++ + +Y L V PL+
Sbjct: 144 QLREKAGDVRRNLRDFELTEEQYIKLKA--FPEDQLSIPEYVSVRFYEL----VNPLRKE 197
Query: 103 GTIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTS 162
+++K++ L L+ + KQLT+ DR S+ + QR A++ + T
Sbjct: 198 ICELQVKKNILAEELSTNKNQLKQLTETYE------EDRKNYSEVQIRCQRLALELADTK 251
Query: 163 RHLEE 167
+ +++
Sbjct: 252 QLIQQ 256
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 33.5 bits (75), Expect = 0.22
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 104 TIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSR 163
T++ M+R L+A AR+ E ++ QLE R+R DR A E +R + RT R
Sbjct: 1590 TMLIMQR--LEAERRARDEERRRQQQLEEMRKREAEDR-----ARQEEERRRQEEERTKR 1642
Query: 164 HLEETI 169
EE +
Sbjct: 1643 DAEEKV 1648
>gi|170650672 Leber congenital amaurosis 5 [Homo sapiens]
Length = 697
Score = 33.5 bits (75), Expect = 0.22
Identities = 57/285 (20%), Positives = 108/285 (37%), Gaps = 40/285 (14%)
Query: 3 RRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVR---KTARLRDKADLLVNEINAYA 59
+R L R + +LQ VS ++ EL + + R + + +K + NEI+
Sbjct: 102 KRILSARLLKINELQNEVSELQVKLAELLKENKSLKRLQYRQEKALNKFEDAENEISQLI 161
Query: 60 ATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTA 119
+ + K Q+ +A +R++ E +T ++ K+K L
Sbjct: 162 FRHNNEITA----LKERLRKSQEKERATEKRVKDTESELFRTKFSLQKLKEISEARHLPE 217
Query: 120 RNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKD 179
R+ AK+L AE +L S++LE + N+F+RQ + +
Sbjct: 218 RDDLAKKLVS-----------------AELKLDDTERRIKELSKNLELSTNSFQRQLLAE 260
Query: 180 IKTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRA 239
K + ++L + Y ++ + + D++ YS+RL
Sbjct: 261 RKRAYEAHDENKVL-----QKEVQRLYHKLKEKERELDIKNI--------YSNRLPKSSP 307
Query: 240 NSKSPLQRSLSAKCVSGTGQVSTCRLRKDQQAEDDEDDELDVTEE 284
N + L +A C S + T + Q ED + +E +T E
Sbjct: 308 NKEKELALRKNAACQSDFADLCT---KGVQTMEDFKPEEYPLTPE 349
>gi|170650670 Leber congenital amaurosis 5 [Homo sapiens]
Length = 697
Score = 33.5 bits (75), Expect = 0.22
Identities = 57/285 (20%), Positives = 108/285 (37%), Gaps = 40/285 (14%)
Query: 3 RRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVR---KTARLRDKADLLVNEINAYA 59
+R L R + +LQ VS ++ EL + + R + + +K + NEI+
Sbjct: 102 KRILSARLLKINELQNEVSELQVKLAELLKENKSLKRLQYRQEKALNKFEDAENEISQLI 161
Query: 60 ATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTA 119
+ + K Q+ +A +R++ E +T ++ K+K L
Sbjct: 162 FRHNNEITA----LKERLRKSQEKERATEKRVKDTESELFRTKFSLQKLKEISEARHLPE 217
Query: 120 RNREAKQLTQLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFERQKMKD 179
R+ AK+L AE +L S++LE + N+F+RQ + +
Sbjct: 218 RDDLAKKLVS-----------------AELKLDDTERRIKELSKNLELSTNSFQRQLLAE 260
Query: 180 IKTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDEDEDLEVFRNSLYAPDYSSRLDIVRA 239
K + ++L + Y ++ + + D++ YS+RL
Sbjct: 261 RKRAYEAHDENKVL-----QKEVQRLYHKLKEKERELDIKNI--------YSNRLPKSSP 307
Query: 240 NSKSPLQRSLSAKCVSGTGQVSTCRLRKDQQAEDDEDDELDVTEE 284
N + L +A C S + T + Q ED + +E +T E
Sbjct: 308 NKEKELALRKNAACQSDFADLCT---KGVQTMEDFKPEEYPLTPE 349
>gi|40807469 TRAF interacting protein [Homo sapiens]
Length = 469
Score = 33.1 bits (74), Expect = 0.29
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 30/186 (16%)
Query: 2 MRRTLENRNAQTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAAT 61
+R TLE RNA LQ A+ E LC ++ + +D+ A
Sbjct: 107 LRDTLEERNATVVSLQQALGKAEM----LCSTLKKQMKYLEQQQDETK---------QAQ 153
Query: 62 ETPHLKLGLMNFADEFAKLQDYRQAEVERL------EAKVVEPLKTYGTIVKMKRDDLKA 115
E M ++ L ++ EVE + VE L Y +K + ++LK
Sbjct: 154 EEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKE 213
Query: 116 TLTARNREAKQLTQ-LERTRQRNPSDRHVISQAETELQRAAMDASRTSRH---------- 164
A A +L + L +R + + + QA+ EL+ A D +
Sbjct: 214 ARKASGEVADKLRKDLFSSRSKLQTVYSELDQAKLELKSAQKDLQSADKEIMSLKKKLTM 273
Query: 165 LEETIN 170
L+ET+N
Sbjct: 274 LQETLN 279
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 33.1 bits (74), Expect = 0.29
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 12 QTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLM 71
+ ++LQT V N + EL + + L K +N TE KL L
Sbjct: 1861 ENERLQTMVQNTK---AELTHSREKVRQLESNLLPKHQKHLNPSGTMNPTEQE--KLSLK 1915
Query: 72 NFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLE 131
D+F K Q +V ++ + + + L+T + ++ + LK + + ++ L
Sbjct: 1916 RECDQFQKEQSPANRKVSQMNS-LEQELET----IHLENEGLKKKQVKLDEQLMEMQHLR 1970
Query: 132 RTRQRNPS----DRHVISQAET---------ELQRAAMDASRTSRHLEETINN 171
T +PS D ++ Q +LQR + A R ++HL+E + N
Sbjct: 1971 STATPSPSPHAWDLQLLQQQACPMVPREQFLQLQRQLLQAERINQHLQEELEN 2023
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 33.1 bits (74), Expect = 0.29
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 12 QTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLM 71
+ ++LQT V N + EL + + L K +N TE KL L
Sbjct: 1855 ENERLQTMVQNTK---AELTHSREKVRQLESNLLPKHQKHLNPSGTMNPTEQE--KLSLK 1909
Query: 72 NFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLE 131
D+F K Q +V ++ + + + L+T + ++ + LK + + ++ L
Sbjct: 1910 RECDQFQKEQSPANRKVSQMNS-LEQELET----IHLENEGLKKKQVKLDEQLMEMQHLR 1964
Query: 132 RTRQRNPS----DRHVISQAET---------ELQRAAMDASRTSRHLEETINN 171
T +PS D ++ Q +LQR + A R ++HL+E + N
Sbjct: 1965 STATPSPSPHAWDLQLLQQQACPMVPREQFLQLQRQLLQAERINQHLQEELEN 2017
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 33.1 bits (74), Expect = 0.29
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 12 QTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLM 71
+ ++LQT V N + EL + + L K +N TE KL L
Sbjct: 1855 ENERLQTMVQNTK---AELTHSREKVRQLESNLLPKHQKHLNPSGTMNPTEQE--KLSLK 1909
Query: 72 NFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLE 131
D+F K Q +V ++ + + + L+T + ++ + LK + + ++ L
Sbjct: 1910 RECDQFQKEQSPANRKVSQMNS-LEQELET----IHLENEGLKKKQVKLDEQLMEMQHLR 1964
Query: 132 RTRQRNPS----DRHVISQAET---------ELQRAAMDASRTSRHLEETINN 171
T +PS D ++ Q +LQR + A R ++HL+E + N
Sbjct: 1965 STATPSPSPHAWDLQLLQQQACPMVPREQFLQLQRQLLQAERINQHLQEELEN 2017
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 33.1 bits (74), Expect = 0.29
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 12 QTKQLQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAATETPHLKLGLM 71
+ ++LQT V N + EL + + L K +N TE KL L
Sbjct: 1855 ENERLQTMVQNTK---AELTHSREKVRQLESNLLPKHQKHLNPSGTMNPTEQE--KLSLK 1909
Query: 72 NFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARNREAKQLTQLE 131
D+F K Q +V ++ + + + L+T + ++ + LK + + ++ L
Sbjct: 1910 RECDQFQKEQSPANRKVSQMNS-LEQELET----IHLENEGLKKKQVKLDEQLMEMQHLR 1964
Query: 132 RTRQRNPS----DRHVISQAET---------ELQRAAMDASRTSRHLEETINN 171
T +PS D ++ Q +LQR + A R ++HL+E + N
Sbjct: 1965 STATPSPSPHAWDLQLLQQQACPMVPREQFLQLQRQLLQAERINQHLQEELEN 2017
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 33.1 bits (74), Expect = 0.29
Identities = 44/253 (17%), Positives = 110/253 (43%), Gaps = 27/253 (10%)
Query: 43 RLRDKADLLVNEI----NAYAATETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEP 98
RL+ + NE+ +++ T+ LK L ++ QD Q E+ +++ ++
Sbjct: 340 RLQRELKCAQNEVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQD-EQNELLKMQLQLQTE 398
Query: 99 LKTYGTIVKMKRDDLKATLTARNREAKQLTQLERTRQRNPS---DRHVISQAETELQRAA 155
L+ +K+TL E + L +L++ ++ + ++ + + + +LQ
Sbjct: 399 LRQLKV--------MKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQEEL 450
Query: 156 MDASRTSRHLEETINNFERQKMKDIKTIFSEFITIEMLFHGKALEVYTAAYQNIQNIDED 215
+HL +T+ +F+ KD +T ++ ++ L+ E+ + Q +++D
Sbjct: 451 QCHEAELQHLRDTVASFKESNEKDTET-HAQLQEMKQLYQASKDELERQKHMYDQ-LEQD 508
Query: 216 -----EDLEVFRNSLYAPD----YSSRLDIVRANSKSPLQRSLSAKCVSGTGQVSTCRLR 266
+L+ + S P+ +++ D + + ++ +++ G Q+ C L
Sbjct: 509 LLLCQLELKELKASHPIPEDKGKCANKCDTLLSRLTELQEKYKASQKEMGQLQMEQCELL 568
Query: 267 KDQQAEDDEDDEL 279
+DQ+ +E +L
Sbjct: 569 EDQRRMQEEQGQL 581
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 33.1 bits (74), Expect = 0.29
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 16/199 (8%)
Query: 106 VKMKRDDLKATLTARNREAKQLTQLERTRQRNPSD-RHVISQAETELQRAAMDASRTSRH 164
V +RD L + + Q T+ ++ +R+ + H ISQ + E+Q+ +ASR R
Sbjct: 158 VTKERDQLLSEVVKLRESLAQTTEQQQETERSKEEAEHAISQFQQEIQQRQNEASREFRK 217
Query: 165 LEETINNFERQKMKDIKTIFSEFITIEMLFHGKALEVYTAAY----QNIQNIDEDEDLEV 220
+E + +Q D+ + +E ++ E+ Q I N ++LE
Sbjct: 218 -KEKLEKELKQIQADMDSRQTEIKALQQYVQKSKEELQKLEQQLKEQKILNERAAKELEQ 276
Query: 221 F--RNSLYAPDYSSRLDIVRANSKSPLQRSLSAKCVS--------GTGQVSTCRLRKDQQ 270
F RN+ + + S+ Q++L K G+++ R + ++
Sbjct: 277 FQMRNAKLQQENEQHSLVCEQLSQENQQKALELKAKEEEVHQMRLDIGKLNKIREQIHKK 336
Query: 271 AEDDEDDELDVTEEENFLK 289
ED + +V + + LK
Sbjct: 337 LHHTEDQKAEVEQHKETLK 355
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 32.7 bits (73), Expect = 0.38
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 34/188 (18%)
Query: 3 RRTLENRNAQTKQ-LQTAVSNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINAYAAT 61
+R LE R AQ ++ L+ SN+E + RKT L V+ +NA A
Sbjct: 1731 KRRLEARIAQLEEELEEEQSNME--------LLNDRFRKTT-------LQVDTLNAELAA 1775
Query: 62 ETPHLKLGLMNFADEFAKLQDYRQAEVERLEAKVVEPLKTYGTIVKMKRDDLKATLTARN 121
E A+ D + ++ER ++ L+ VK K KAT++A
Sbjct: 1776 ER------------SAAQKSDNARQQLERQNKELKAKLQELEGAVKSK---FKATISALE 1820
Query: 122 REAKQLT-QLERTRQRNPSDRHVISQAETELQRAAMDASRTSRHLEETINNFER--QKMK 178
+ QL QLE+ + + ++ + E +L+ M RH ++ E+ +MK
Sbjct: 1821 AKIGQLEEQLEQEAKERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMK 1880
Query: 179 DIKTIFSE 186
+K E
Sbjct: 1881 QLKRQLEE 1888
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,861,980
Number of Sequences: 37866
Number of extensions: 338721
Number of successful extensions: 2433
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 2271
Number of HSP's gapped (non-prelim): 282
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.