RBMS1 36521

Name: RBMS1	Sequence: fasta or formatted (406aa)		NCBI GI: 8400718
Description: RNA binding motif, single stranded interacting protein 1 isoform a		Referenced in: RNA-binding Proteins
Other entries for this name: alt prot [403aa] RNA binding motif, single stranded interacting protein 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 33 3 C cysteine 1.0 4 1 D aspartate 3.0 12 1 E glutamate 3.4 14 2 F phenylalanine 2.2 9 1 G glycine 6.2 25 2 H histidine 2.2 9 1 I isoleucine 3.9 16 1 K lysine 5.4 22 2 L leucine 6.4 26 2 M methionine 4.2 17 1 N asparagine 4.2 17 3 P proline 9.4 38 2 Q glutamine 8.9 36 3 R arginine 2.5 10 1 S serine 10.3 42 5 T threonine 7.9 32 2 V valine 4.7 19 1 W tryptophan 1.0 4 1 Y tyrosine 5.2 21 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA binding motif, single stranded interacting protei... RBMS1 0.988 RNA binding motif, single stranded interacting protei... RBMS3 0.725 RNA binding motif, single stranded interacting prote... RBMS3 0.711 RNA binding motif, single stranded interacting prote... RBMS3 0.668 RNA binding motif, single stranded interacting prote... RBMS2 0.648 RNA binding motif, single stranded interacting protei... ELAVL2 0.126 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL4 0.114 ELAV-like 4 isoform 5 ELAVL4 0.114 ELAV-like 4 isoform 4 ELAVL4 0.113 ELAV-like 4 isoform 1 ELAVL4 0.113 ELAV-like 4 isoform 3 ELAVL4 0.113 ELAV-like 4 isoform 2 ELAVL3 0.106 ELAV-like protein 3 isoform 1 ELAVL3 0.106 ELAV-like protein 3 isoform 2 ELAVL1 0.097 ELAV-like 1 PABPC1 0.082 poly(A) binding protein, cytoplasmic 1 PABPC1L 0.076 poly(A)-binding protein, cytoplasmic 1-like PABPC3 0.070 poly(A) binding protein, cytoplasmic 3 BRUNOL5 0.067 bruno-like 5, RNA binding protein isoform 1 PABPC4 0.067 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.067 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.067 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC1L2B 0.065 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.065 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... PABPC5 0.063 poly(A) binding protein, cytoplasmic 5 PABPC4L 0.062 poly(A) binding protein, cytoplasmic 4-like TNRC4 0.060 trinucleotide repeat containing 4 BRUNOL4 0.052 bruno-like 4, RNA binding protein isoform 4 CUGBP2 0.049 CUG triplet repeat, RNA binding protein 2 isoform 3 ... BRUNOL6 0.049 bruno-like 6, RNA binding protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.