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Search of human proteins with 149944433
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149944433 hampin [Homo sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149944433 hampin [Homo sapiens] 721 0.0
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 50 3e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 7e-05
gi|32698714 hypothetical protein LOC284058 [Homo sapiens] 44 3e-04
gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [H... 40 0.003
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 39 0.005
gi|40217794 hypothetical protein LOC151050 [Homo sapiens] 39 0.005
gi|18034775 PHD finger protein 20 [Homo sapiens] 39 0.007
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 39 0.007
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.009
gi|149944516 tet oncogene family member 3 [Homo sapiens] 38 0.012
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 38 0.012
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 38 0.012
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 38 0.016
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 37 0.027
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 36 0.045
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 36 0.045
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.059
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.059
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 36 0.059
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 36 0.059
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 36 0.059
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 36 0.059
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 36 0.059
gi|41281808 harmonin isoform b3 [Homo sapiens] 35 0.077
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.077
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.10
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 35 0.10
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens] 35 0.10
gi|7706589 GNAS complex locus NESP55 [Homo sapiens] 35 0.13
>gi|149944433 hampin [Homo sapiens]
Length = 351
Score = 721 bits (1861), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCG 60
MERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCG
Sbjct: 1 MERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCG 60
Query: 61 RSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRS 120
RSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRS
Sbjct: 61 RSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRS 120
Query: 121 QETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSP 180
QETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSP
Sbjct: 121 QETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSP 180
Query: 181 LPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVF 240
LPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVF
Sbjct: 181 LPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVF 240
Query: 241 SKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVES 300
SKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVES
Sbjct: 241 SKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSFFPEPDDVES 300
Query: 301 LMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK 351
LMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK
Sbjct: 301 LMITPFLPVVAFGRPLPKLTPQNFELPWLDERSRCRLEIQKKQTPHRTCRK 351
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.1 bits (118), Expect = 3e-06
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 22/168 (13%)
Query: 36 KIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKK---LAPEFSKVK 92
K K P S +S + PPK S S + H SP + TP ++ +P+ ++
Sbjct: 805 KAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQS 864
Query: 93 TKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKA 152
+ S + P L R S +P + +SS TPPR S P + S PK KA
Sbjct: 865 VTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSS--TPPRQS-PSRSSSPQPKVKA 921
Query: 153 FSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESS---PKKEETVARC 197
S + R H SP P R +S P++ +V+ C
Sbjct: 922 IISPRQ-------------RSHSGSSSPSPSRVTSRTTPRRSRSVSPC 956
Score = 37.7 bits (86), Expect = 0.016
Identities = 42/166 (25%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Query: 40 ECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKT-----PVKKLAPEFSKV--K 92
+ PE + P+ G S KG + SP GS+ ++ P + A S+ +
Sbjct: 1619 DSSPEPKAPAPRALPRRSRSGSSSKG-RGPSPEGSSSTESSPEHPPKSRTARRGSRSSPE 1677
Query: 93 TKTPKHSPIKEEPCGSLSETVCKREL--RSQETPEKPRSSVDTPPRLSTPQKGPSTHPKE 150
KT +P + S E K L RS+ P + TPPR S P E
Sbjct: 1678 PKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAE 1737
Query: 151 KAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAR 196
K+ SS T+ R P P P L+ S + R
Sbjct: 1738 KSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Score = 31.6 bits (70), Expect = 1.1
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 8/111 (7%)
Query: 53 PPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSET 112
PPKP+S R + +P ++K + E S + + K S K+ SE+
Sbjct: 167 PPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKH----RSES 222
Query: 113 VCKRELRSQETPEKPRSSVDTP---PRLSTP-QKGPSTHPKEKAFSSEIED 159
K+ TP+ R S D R +TP K H A S+ D
Sbjct: 223 ESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSD 273
Score = 28.9 bits (63), Expect = 7.2
Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 53 PPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSET 112
PP+ S RS + S +++ +P S+V ++T PC ++
Sbjct: 904 PPRQ-SPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESR 962
Query: 113 VCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKA 152
+ R S + + +TPPR S S +PK KA
Sbjct: 963 LLPRYSHSGSSSPDTKVKPETPPRQS-HSGSISPYPKVKA 1001
Score = 28.5 bits (62), Expect = 9.4
Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 14/253 (5%)
Query: 46 SETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPI-KEE 104
SE + PK + SP + + TP ++ + S V KT +P+ +
Sbjct: 1478 SECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRS 1537
Query: 105 PCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTP--QKGPSTHPKEKAFSSEIEDLPY 162
GS E K QE E SS D+ + TP Q+ S E S +
Sbjct: 1538 RSGSSQELDVKPSASPQERSESD-SSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRS 1596
Query: 163 LSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEP 222
S + + + P +SSP+ + R L S +G +S PS P
Sbjct: 1597 RSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPS-------P 1649
Query: 223 LRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRL--QLRMYKKKG 280
+ E+ S ++R ++ + K + R +R R R L + R+ ++
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRR-RSSRSSPELTRKARLSRRSR 1708
Query: 281 IQESEPEVTSFFP 293
S PE S P
Sbjct: 1709 SASSSPETRSRTP 1721
Score = 28.5 bits (62), Expect = 9.4
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 99 SPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPP---RLSTPQKGPSTHPKEKAFSS 155
SP+ S + V +R RS+ + RS TPP R S + P T + ++ +S
Sbjct: 1916 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTS 1975
Query: 156 EIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVAR 196
I S T R + SP+ R S + R
Sbjct: 1976 PITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 2016
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.4 bits (106), Expect = 7e-05
Identities = 69/325 (21%), Positives = 120/325 (36%), Gaps = 55/325 (16%)
Query: 10 KDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRK 69
K EKE K ++ E+ ++ E+ K + + E + P K ++
Sbjct: 531 KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKE 590
Query: 70 SPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEE-------PCGSLSETVCKRELRSQE 122
E K+P K +P + K+ SP+KEE +++ K E +S E
Sbjct: 591 EAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE 650
Query: 123 -----------TPEKPRSSV----DTPPRLSTPQKGPSTHP-------KEKAFSSEIEDL 160
+PEK +S V +P + +P K + P KE+A S E
Sbjct: 651 KAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKS 710
Query: 161 PYLSTTEMYLCRWHQPPPSPLPLRE--------SSPKKEETVARCLMPSSVAGETSVLAV 212
P + P + P++E SP KEE + S +T +
Sbjct: 711 PVKEEAK-------SPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKS 763
Query: 213 PSWRDHSVEPLRDPN---PSDLLENLDDSVFSKRHAKLELDEKRR-------KRWDIQR- 261
P + + E R P P + + V S AK L E + K+ +++
Sbjct: 764 PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP 823
Query: 262 IREQRILQRLQLRMYKKKGIQESEP 286
++E+ Q ++++ KK +E P
Sbjct: 824 VKEEEKPQEVKVKEPPKKAEEEKAP 848
Score = 40.0 bits (92), Expect = 0.003
Identities = 56/257 (21%), Positives = 93/257 (36%), Gaps = 42/257 (16%)
Query: 9 KKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKR 68
K++ K + ++ +EE + EK K + + + +P K +
Sbjct: 771 KEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKK----------EEV 820
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
KSP E+ VK P + K P +P EE S E K+E + EK
Sbjct: 821 KSPVKEEEKPQEVKVKEPPKKAEEEKAPA-TPKTEEKKDSKKEEAPKKEAPKPKVEEKKE 879
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSP 188
+V+ P K +A E ED + T E + P+ + ++E +
Sbjct: 880 PAVEKP-----------KESKVEAKKEEAEDKKKVPTPE-------KEAPAKVEVKEDAK 921
Query: 189 KKEETV--------ARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLE---NLDD 237
KE+T A+ PS A + A P +D E + P E DD
Sbjct: 922 PKEKTEVAKKEPDDAKAKEPSKPAEKKE--AAPEKKDTKEEKAKKPEEKPKTEAKAKEDD 979
Query: 238 SVFSKRHAKLELDEKRR 254
SK +K + ++ +
Sbjct: 980 KTLSKEPSKPKAEKAEK 996
Score = 39.7 bits (91), Expect = 0.004
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 14/208 (6%)
Query: 26 EEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLA 85
E+ ++ + E+ K + + E + P K ++ E K+P K+ A
Sbjct: 513 EKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEA 572
Query: 86 PEFSKVKTKTPKHSPIKEE---PCGSLSETVCKRELRSQ-ETPEKPRSSV----DTPPRL 137
++VK+ SP KEE P + S K ++ + ++P + +S V +P +
Sbjct: 573 KSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEV 632
Query: 138 STPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARC 197
+P+K S KE+A S E P E + + SP+ SP+K ++ +
Sbjct: 633 KSPEKAKSP-TKEEAKSPEKAKSP-----EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKA 686
Query: 198 LMPSSVAGETSVLAVPSWRDHSVEPLRD 225
S ++ V + + P+++
Sbjct: 687 EAKSPEKAKSPVKEEAKSPEKAKSPVKE 714
Score = 37.7 bits (86), Expect = 0.016
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 26/206 (12%)
Query: 2 ERRMQLVKKDNEKER--HKLFQGYETEEREETELSEKIKLECQPELSETSQTLPP----- 54
E+ +V++ E+ + ++ + E E +EE E+ E + E E PP
Sbjct: 451 EKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAA 510
Query: 55 KPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEE-------PCG 107
P +S + KSP E K+P K+ A ++VK+ SP KEE
Sbjct: 511 SPEKEAKSPVKEEAKSP---AEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSP 567
Query: 108 SLSETVCKRELRSQETPEKP-RSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTT 166
E E++S E + P + +P +P+K S KE+A S P
Sbjct: 568 EKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSP-VKEEAKSPAEAKSPVKEEA 626
Query: 167 EMYLCRWHQPPPSPLPLRESSPKKEE 192
+ P P + SP KEE
Sbjct: 627 K-------SPAEVKSPEKAKSPTKEE 645
Score = 35.8 bits (81), Expect = 0.059
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 9 KKDNEKER--HKLFQGYETEEREE--TELSEKIKLECQPELSETSQTLPPKPFSCGRSGK 64
KKD++KE K + EE++E E ++ K+E + E +E + +P +
Sbjct: 856 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 915
Query: 65 GHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETP 124
+ P + KT V K P+ K K P K+E +T ++ + +E P
Sbjct: 916 VKEDAKP----KEKTEVAKKEPD--DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKP 969
Query: 125 EKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIED 159
+ + + LS P EK+ S++ +D
Sbjct: 970 KTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKD 1004
>gi|32698714 hypothetical protein LOC284058 [Homo sapiens]
Length = 1105
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/171 (23%), Positives = 63/171 (36%), Gaps = 38/171 (22%)
Query: 123 TPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPL- 181
T K ++ PP + P + SE+ ++ YL H PP SPL
Sbjct: 764 TAPKAERLLNPPPPVHDPNHSKMRLRDHSSERSEVLKHHTDMSSSSYLAATHHPPHSPLV 823
Query: 182 --------------------------PLRESSPKKEETVARCLMPSSVAGETSV------ 209
P+R + + ++P SVA T V
Sbjct: 824 RQLSTSSDSPAPASSSSQVTASTSQQPVRRRRGESSFDINNIVIPMSVAATTRVEKLQYK 883
Query: 210 -LAVPSWRDHSVEPLR--DPNPSDLLENLDDSVFSKRHAKLELDEKRRKRW 257
+ PSWR+ ++ L+ ++ +E+L D+ F+ HAK E E R RW
Sbjct: 884 EILTPSWREVDLQSLKGSPDEENEEIEDLSDAAFAALHAKCE--EMERARW 932
>gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [Homo
sapiens]
Length = 1447
Score = 40.0 bits (92), Expect = 0.003
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 17/173 (9%)
Query: 1 MERRMQLVKKDNEK-ERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSC 59
M+ +LV++ K + +G+ E +E + E+ +L+ +E Q PPK
Sbjct: 1231 MDDLTKLVQEQKPKGSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNSPPKKGKR 1290
Query: 60 GRS----GKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCK 115
GR G G ++ P T +K KK P + + + + S E+ S V +
Sbjct: 1291 GRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPPAPEEEEEEERQSGNTEQKSKSKQHRVSR 1350
Query: 116 RELR------------SQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSE 156
R + +Q TP+K R P S P+K ++A + E
Sbjct: 1351 RAQQRAESPESSAIESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATKE 1403
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 39.3 bits (90), Expect = 0.005
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 23/136 (16%)
Query: 13 EKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPF 72
+ ERH ER T LS K E P +S +S+T P S + H S
Sbjct: 1814 KSERHAPGSPSPKTERHST-LSSSAKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSS 1872
Query: 73 GSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVD 132
TE+ +PV TKT +HSP+ S T +R P P D
Sbjct: 1873 SKTEKHSPVSP--------STKTERHSPV--------SSTKTER-----HPPVSPSGKTD 1911
Query: 133 TPPRLSTPQKGPSTHP 148
P +S P HP
Sbjct: 1912 KRPPVS-PSGRTEKHP 1926
>gi|40217794 hypothetical protein LOC151050 [Homo sapiens]
Length = 987
Score = 39.3 bits (90), Expect = 0.005
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 210 LAVPSWRDHSVEPLRDPN-PSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRIL 268
+ PSWR ++PL + N + +E+L D VFS RH K E E+ + RW + EQ
Sbjct: 795 ILTPSWRMVVLQPLDEYNLGKEEIEDLSDEVFSLRHKKYE--EREQARWSLW---EQSKW 849
Query: 269 QRLQLRMYKK 278
R R Y K
Sbjct: 850 HRRNSRAYSK 859
>gi|18034775 PHD finger protein 20 [Homo sapiens]
Length = 1012
Score = 38.9 bits (89), Expect = 0.007
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 10 KDNEKERHKLFQGY---ETEEREETELSEKIKLECQPELSETSQ-TLPPKPFSCGRSGKG 65
KD EK + K F+ + + +++++ + K + C E+S+TSQ PPK F+ R G
Sbjct: 523 KDKEKNKEKKFKEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFAVTRCGSS 582
Query: 66 HK 67
HK
Sbjct: 583 HK 584
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 23/154 (14%)
Query: 26 EEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLA 85
++ EE E EK K + E++E +T+ PK + K + S + K KK
Sbjct: 25 KQTEEKEKKEKPKSDKTEEIAEEEETVFPKAKQVKK--KAEPSEVDMNSPKSKKAKKKEE 82
Query: 86 PEFSKVKTKT----PKHSPIKEEPCGSLSETVCKRELRSQETPEKPR------------S 129
P + + KT K PI+++ S ++ V K E S+E + P+
Sbjct: 83 PSQNDISPKTKSLRKKKEPIEKKVVSSKTKKVTKNEEPSEEEIDAPKPKKMKKEKEMNGE 142
Query: 130 SVDTPPRLST--PQKGPSTHPKEKA---FSSEIE 158
+ + P+L P P +P E A +SEIE
Sbjct: 143 TREKSPKLKNGFPHPEPDCNPSEAASEESNSEIE 176
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.5 bits (88), Expect = 0.009
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 120 SQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFS---SEIEDLPYLSTTEMYLCRWHQP 176
S ETP + T + P++ P + +++++ SE+++ +L E+ QP
Sbjct: 421 SPETPSAGQQEAKTD-QADGPREPPQSARRKRSYKQAVSELDEEQHLEDEEL------QP 473
Query: 177 PPSPLPLRESSPKKEETVARCLMPS-SVAGETSVLAVPSWRDHSV--------EPLR-DP 226
P S P SSP V R L +L P+ SV PLR DP
Sbjct: 474 PRSKTP---SSPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDP 530
Query: 227 NPSDL--LENL--DDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQ 282
+ LENL + R K+E ++KRR+ +++ RE+R+ + LQ R ++ +
Sbjct: 531 KEKERQRLENLRRKEEAEQLRRQKVE-EDKRRRLEEVKLKREERLRKVLQARERVEQMKE 589
Query: 283 ESEPEVTSFFPEPDD 297
E + ++ F + D+
Sbjct: 590 EKKKQIEQKFAQIDE 604
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 38.1 bits (87), Expect = 0.012
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 25/115 (21%)
Query: 103 EEPCGSLSETVCKRELRSQETPEKPRSSVDTPP-------------RLSTPQKGPSTHPK 149
E+ GS S+ + R + P KP+ V+ P TP P TH K
Sbjct: 329 EQLLGSASDYIQSVFKRPEALPTKPKVKVEAPSSSPAPAPSPVLQREAPTPSSEPDTHQK 388
Query: 150 EKA------------FSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEE 192
+ F ++ D + + +E W PP SP+P P KE+
Sbjct: 389 AQTALQQHLHHKRSLFLEQVHDTSFPAPSEPSAPGWWPPPSSPVPRLPDRPPKEK 443
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 38.1 bits (87), Expect = 0.012
Identities = 62/314 (19%), Positives = 125/314 (39%), Gaps = 32/314 (10%)
Query: 2 ERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKL-ECQPELSETSQTLPPKPFSCG 60
E+R Q+ +KD EK K F+ + + E +K+ L EC ++ E + C
Sbjct: 800 EKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCH 859
Query: 61 RSGKGHKRKSPFGST-ERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELR 119
+ G+ K + T +R+ +K+ + K K + +H + E L E K+
Sbjct: 860 KEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERH--LAESKEKHLMEKKNKQSDN 917
Query: 120 SQETPEKPRSSVDTPPRLSTPQKG---------PSTHPKEKAFSSEIEDLPYLSTTEMYL 170
S+ + + + + L +K S H +E+ SS ++ + L
Sbjct: 918 SEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSL 977
Query: 171 CRWHQPPPSPLPLRESSPKKEETVAR---------------CLMPSSVAGETSVLAVPSW 215
+ P P + KK++ + R L S A + + P+
Sbjct: 978 KEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPAS 1037
Query: 216 RDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQR--LQL 273
+D + R N DL++ + + S + ++E K+ K I++ ++R+ R L+L
Sbjct: 1038 KDTRPKEKRLVN-DDLMQTSFERMLSLKDLEIEQWHKKHKE-KIKQKEKERLRNRNCLEL 1095
Query: 274 RMYKKKGIQESEPE 287
++ K+ + + E
Sbjct: 1096 KIKDKEKTKHTPTE 1109
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 38.1 bits (87), Expect = 0.012
Identities = 62/314 (19%), Positives = 125/314 (39%), Gaps = 32/314 (10%)
Query: 2 ERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKL-ECQPELSETSQTLPPKPFSCG 60
E+R Q+ +KD EK K F+ + + E +K+ L EC ++ E + C
Sbjct: 823 EKRSQIKEKDIEKMERKTFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCH 882
Query: 61 RSGKGHKRKSPFGST-ERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELR 119
+ G+ K + T +R+ +K+ + K K + +H + E L E K+
Sbjct: 883 KEGEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERH--LAESKEKHLMEKKNKQSDN 940
Query: 120 SQETPEKPRSSVDTPPRLSTPQKG---------PSTHPKEKAFSSEIEDLPYLSTTEMYL 170
S+ + + + + L +K S H +E+ SS ++ + L
Sbjct: 941 SEYSKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSL 1000
Query: 171 CRWHQPPPSPLPLRESSPKKEETVAR---------------CLMPSSVAGETSVLAVPSW 215
+ P P + KK++ + R L S A + + P+
Sbjct: 1001 KEKTKDEPLKTPDGKEKDKKDKDIDRYKERDKHKDKIQINSLLKLKSEADKPKPKSSPAS 1060
Query: 216 RDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQR--LQL 273
+D + R N DL++ + + S + ++E K+ K I++ ++R+ R L+L
Sbjct: 1061 KDTRPKEKRLVN-DDLMQTSFERMLSLKDLEIEQWHKKHKE-KIKQKEKERLRNRNCLEL 1118
Query: 274 RMYKKKGIQESEPE 287
++ K+ + + E
Sbjct: 1119 KIKDKEKTKHTPTE 1132
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 37.7 bits (86), Expect = 0.016
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 9 KKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKR 68
KK+ EK R KL G E+ ++ ++ K C+ S +S
Sbjct: 70 KKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSD----------------- 112
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
S S++ + KK K K ++ K S S S+ K++ +S++ EK +
Sbjct: 113 -SSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEK 171
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSE 156
S +K ++P +K SSE
Sbjct: 172 DV------RSLSKKRKKSYPDDKPLSSE 193
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 37.0 bits (84), Expect = 0.027
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 120 SQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFS---SEIEDLPYLSTTEMYLCRWHQP 176
S ETP + T + P++ P + +++++ SE+++ +L E+ QP
Sbjct: 421 SPETPSAGQQEAKTD-QADGPREPPQSARRKRSYKQAVSELDEEQHLEDEEL------QP 473
Query: 177 PPSPLPLRESSPKKEETVARCLMPS-SVAGETSVLAVPSWRDHSV--------EPLR-DP 226
P S P SSP V R L +L P+ SV PLR DP
Sbjct: 474 PRSKTP---SSPCPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDP 530
Query: 227 NPSDL------LENL--DDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKK 278
S + LENL + R K+E ++KRR+ +++ RE+R+ + LQ R +
Sbjct: 531 KCSFVEKERQRLENLRRKEEAEQLRRQKVE-EDKRRRLEEVKLKREERLRKVLQARERVE 589
Query: 279 KGIQESEPEVTSFFPEPDD 297
+ +E + ++ F + D+
Sbjct: 590 QMKEEKKKQIEQKFAQIDE 608
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 36.2 bits (82), Expect = 0.045
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 20/114 (17%)
Query: 121 QETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSP 180
Q P+ P S P + + PQ+ P + A +S+++ P + + +Q PSP
Sbjct: 206 QPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSP 265
Query: 181 LPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLEN 234
S P+K PS G +PS PL PNP L+ N
Sbjct: 266 TQQSSSPPQK---------PSQSPGH----GLPS-------PLTPPNPLQLVNN 299
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 36.2 bits (82), Expect = 0.045
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 114 CKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRW 173
C EL+ QE SV+ P LS P P T + SE+ D + T+
Sbjct: 808 CLEELQRQEP------SVEPPFALSPPSSSPDTGLSSVSSPSELSDGTFSVTSAYSSAPD 861
Query: 174 HQPPPSPLPLRE 185
PPP+PLP E
Sbjct: 862 GSPPPAPLPASE 873
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.059
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 19/174 (10%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
K P +T +K K+LAP +K T T P P G+ + TP++P
Sbjct: 584 KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-----------APTTPKEPA 632
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP--YLSTTEMYLCRWHQPPPSPLPLRES 186
+ P +TP+ T KE A ++ + P TT P+P +E+
Sbjct: 633 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 692
Query: 187 SP--KKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDS 238
+P KE P+ ET P P P+ + ++ D+S
Sbjct: 693 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVSTPTTTKEPTTIHKSPDES 742
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 47 ETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPC 106
E + T P +P K P +T + P P + TK P + KE
Sbjct: 223 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP--APTTTKEPAPTTPKEPAP 280
Query: 107 GSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTT 166
+ E + TP++P + P +TP++ T PKE ++ E P TT
Sbjct: 281 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP---TT 337
Query: 167 EMYLCRWHQPPPSPLPLRESSPKK 190
+ P +P ++PKK
Sbjct: 338 K------EPAPTTPKEPAPTAPKK 355
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E T + K E P E + T P +P T K P
Sbjct: 320 TTPKEPTPTTPK---EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 376
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSL--SETVCKRELRSQETP-----EKPRSSVDTPPRL 137
E S K P + K P + + T K + + P ++P + P
Sbjct: 377 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 436
Query: 138 STPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+TP+K T PKE A ++ E P + P +P ++PKK
Sbjct: 437 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 489
Score = 33.1 bits (74), Expect = 0.38
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 18/169 (10%)
Query: 30 ETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHK-----RKSPFGSTERKTPVKKL 84
+T ++ K+ P+++ T++ + P+P S + K T+ T K
Sbjct: 103 DTSTTQHNKVSTSPKIT-TAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQ 161
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTP---PRLSTPQ 141
K KT + K + S+ +T K + + KP +T P L+TP+
Sbjct: 162 TSTDGKEKTTSAKETQ-------SIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPK 214
Query: 142 KGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+ T PKE A ++ E P +T + +P P+ ++PK+
Sbjct: 215 EPTPTTPKEPASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKE 261
Score = 33.1 bits (74), Expect = 0.38
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 17/172 (9%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E + K P+ + T P P + + K +P T KK
Sbjct: 257 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP-------TTPKKP 309
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGP 144
AP K T P P E + + TP++P + P +TP++
Sbjct: 310 APTTPKEPAPTTPKEPTPTTP----KEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA 365
Query: 145 STHPKEKAFSSEIEDLPYL------STTEMYLCRWHQPPPSPLPLRESSPKK 190
T PKE A ++ E P +TT+ +P P+ ++PK+
Sbjct: 366 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 417
Score = 31.2 bits (69), Expect = 1.5
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 69 KSPFGSTERKTPV---KKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++T KKL P + T P P L+ T E + TPE
Sbjct: 472 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP-EELAPTT--PEEPTPTTPE 528
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRE 185
+P + +TP++ T PKE A ++ E P TT +P L+E
Sbjct: 529 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP---TTPKETAPTTPKGTAPTTLKE 585
Query: 186 SSPKKEETVA-RCLMPSSVAGETS 208
+P + A + L P++ TS
Sbjct: 586 PAPTTPKKPAPKELAPTTTKEPTS 609
Score = 30.4 bits (67), Expect = 2.5
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 69 KSPFGSTERK---TPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++ T K+ AP K T T +P K P E + TPE
Sbjct: 464 KKPAPTTPKEPAPTTPKETAPTTPKKLTPT---TPEKLAPTTPEKPAPTTPEELAPTTPE 520
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP 161
+P + P +TP+ PKE A ++ E P
Sbjct: 521 EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 556
Score = 29.6 bits (65), Expect = 4.2
Identities = 45/214 (21%), Positives = 69/214 (32%), Gaps = 25/214 (11%)
Query: 32 ELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKV 91
E S + E E ET+ T GK + + KT K LAP +
Sbjct: 139 ETSLTVNKETTVETKETTTTNK----QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVL 194
Query: 92 KTKTPKHSPIKE----------------EPCGSLSETVCKRELRSQETPEKPRSSVDTPP 135
TPK + EP + + ++S T K + T
Sbjct: 195 AKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 254
Query: 136 RLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVA 195
+TP++ T KE A ++ E P +T E P +P ++PKK
Sbjct: 255 APTTPKEPAPTTTKEPAPTTPKEPAP-TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 313
Query: 196 RCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPS 229
P A T P+ ++P P+
Sbjct: 314 ----PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 343
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.8 bits (81), Expect = 0.059
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 19/174 (10%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
K P +T +K K+LAP +K T T P P G+ + TP++P
Sbjct: 625 KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-----------APTTPKEPA 673
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP--YLSTTEMYLCRWHQPPPSPLPLRES 186
+ P +TP+ T KE A ++ + P TT P+P +E+
Sbjct: 674 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 733
Query: 187 SP--KKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDS 238
+P KE P+ ET P P P+ + ++ D+S
Sbjct: 734 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVSTPTTTKEPTTIHKSPDES 783
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 47 ETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPC 106
E + T P +P K P +T + P P + TK P + KE
Sbjct: 264 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP--APTTTKEPAPTTPKEPAP 321
Query: 107 GSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTT 166
+ E + TP++P + P +TP++ T PKE ++ E P TT
Sbjct: 322 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP---TT 378
Query: 167 EMYLCRWHQPPPSPLPLRESSPKK 190
+ P +P ++PKK
Sbjct: 379 K------EPAPTTPKEPAPTAPKK 396
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E T + K E P E + T P +P T K P
Sbjct: 361 TTPKEPTPTTPK---EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 417
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSL--SETVCKRELRSQETP-----EKPRSSVDTPPRL 137
E S K P + K P + + T K + + P ++P + P
Sbjct: 418 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 477
Query: 138 STPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+TP+K T PKE A ++ E P + P +P ++PKK
Sbjct: 478 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 530
Score = 33.1 bits (74), Expect = 0.38
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 18/169 (10%)
Query: 30 ETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHK-----RKSPFGSTERKTPVKKL 84
+T ++ K+ P+++ T++ + P+P S + K T+ T K
Sbjct: 144 DTSTTQHNKVSTSPKIT-TAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQ 202
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTP---PRLSTPQ 141
K KT + K + S+ +T K + + KP +T P L+TP+
Sbjct: 203 TSTDGKEKTTSAKETQ-------SIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPK 255
Query: 142 KGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+ T PKE A ++ E P +T + +P P+ ++PK+
Sbjct: 256 EPTPTTPKEPASTTPKEPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKE 302
Score = 33.1 bits (74), Expect = 0.38
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 17/172 (9%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E + K P+ + T P P + + K +P T KK
Sbjct: 298 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP-------TTPKKP 350
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGP 144
AP K T P P E + + TP++P + P +TP++
Sbjct: 351 APTTPKEPAPTTPKEPTPTTP----KEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA 406
Query: 145 STHPKEKAFSSEIEDLPYL------STTEMYLCRWHQPPPSPLPLRESSPKK 190
T PKE A ++ E P +TT+ +P P+ ++PK+
Sbjct: 407 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Score = 31.2 bits (69), Expect = 1.5
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 69 KSPFGSTERKTPV---KKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++T KKL P + T P P L+ T E + TPE
Sbjct: 513 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP-EELAPTT--PEEPTPTTPE 569
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRE 185
+P + +TP++ T PKE A ++ E P TT +P L+E
Sbjct: 570 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP---TTPKETAPTTPKGTAPTTLKE 626
Query: 186 SSPKKEETVA-RCLMPSSVAGETS 208
+P + A + L P++ TS
Sbjct: 627 PAPTTPKKPAPKELAPTTTKEPTS 650
Score = 30.4 bits (67), Expect = 2.5
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 69 KSPFGSTERK---TPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++ T K+ AP K T T +P K P E + TPE
Sbjct: 505 KKPAPTTPKEPAPTTPKETAPTTPKKLTPT---TPEKLAPTTPEKPAPTTPEELAPTTPE 561
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP 161
+P + P +TP+ PKE A ++ E P
Sbjct: 562 EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 597
Score = 29.6 bits (65), Expect = 4.2
Identities = 45/214 (21%), Positives = 69/214 (32%), Gaps = 25/214 (11%)
Query: 32 ELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKV 91
E S + E E ET+ T GK + + KT K LAP +
Sbjct: 180 ETSLTVNKETTVETKETTTTNK----QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVL 235
Query: 92 KTKTPKHSPIKE----------------EPCGSLSETVCKRELRSQETPEKPRSSVDTPP 135
TPK + EP + + ++S T K + T
Sbjct: 236 AKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 295
Query: 136 RLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVA 195
+TP++ T KE A ++ E P +T E P +P ++PKK
Sbjct: 296 APTTPKEPAPTTTKEPAPTTPKEPAP-TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 354
Query: 196 RCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPS 229
P A T P+ ++P P+
Sbjct: 355 ----PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 384
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.8 bits (81), Expect = 0.059
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 19/174 (10%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
K P +T +K K+LAP +K T T P P G+ + TP++P
Sbjct: 677 KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-----------APTTPKEPA 725
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP--YLSTTEMYLCRWHQPPPSPLPLRES 186
+ P +TP+ T KE A ++ + P TT P+P +E+
Sbjct: 726 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 785
Query: 187 SP--KKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDS 238
+P KE P+ ET P P P+ + ++ D+S
Sbjct: 786 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVSTPTTTKEPTTIHKSPDES 835
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 47 ETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPC 106
E + T P +P K P +T + P P + TK P + KE
Sbjct: 316 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP--APTTTKEPAPTTPKEPAP 373
Query: 107 GSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTT 166
+ E + TP++P + P +TP++ T PKE ++ E P TT
Sbjct: 374 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP---TT 430
Query: 167 EMYLCRWHQPPPSPLPLRESSPKK 190
+ P +P ++PKK
Sbjct: 431 K------EPAPTTPKEPAPTAPKK 448
Score = 34.3 bits (77), Expect = 0.17
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 2 ERRMQLVKKDNEKERHK----------------LFQGYETEEREETELSEKIKLECQPEL 45
E + +L KDN+K R K L G +T ++ K+ P++
Sbjct: 152 ELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKI 211
Query: 46 SETSQTLPPKPFSCGRSGKGHK-----RKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSP 100
+ T++ + P+P S + K T+ T K K KT + K +
Sbjct: 212 T-TAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQ 270
Query: 101 IKEEPCGSLSETVCKRELRSQETPEKPRSSVDTP---PRLSTPQKGPSTHPKEKAFSSEI 157
S+ +T K + + KP +T P L+TP++ T PKE A ++
Sbjct: 271 -------SIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPK 323
Query: 158 EDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
E P +T + +P P+ ++PK+
Sbjct: 324 EPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKE 354
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E T + K E P E + T P +P T K P
Sbjct: 413 TTPKEPTPTTPK---EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSL--SETVCKRELRSQETP-----EKPRSSVDTPPRL 137
E S K P + K P + + T K + + P ++P + P
Sbjct: 470 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Query: 138 STPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+TP+K T PKE A ++ E P + P +P ++PKK
Sbjct: 530 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 582
Score = 33.1 bits (74), Expect = 0.38
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 17/172 (9%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E + K P+ + T P P + + K +P T KK
Sbjct: 350 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP-------TTPKKP 402
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGP 144
AP K T P P E + + TP++P + P +TP++
Sbjct: 403 APTTPKEPAPTTPKEPTPTTP----KEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA 458
Query: 145 STHPKEKAFSSEIEDLPYL------STTEMYLCRWHQPPPSPLPLRESSPKK 190
T PKE A ++ E P +TT+ +P P+ ++PK+
Sbjct: 459 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 510
Score = 31.2 bits (69), Expect = 1.5
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 69 KSPFGSTERKTPV---KKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++T KKL P + T P P L+ T E + TPE
Sbjct: 565 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP-EELAPTT--PEEPTPTTPE 621
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRE 185
+P + +TP++ T PKE A ++ E P TT +P L+E
Sbjct: 622 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP---TTPKETAPTTPKGTAPTTLKE 678
Query: 186 SSPKKEETVA-RCLMPSSVAGETS 208
+P + A + L P++ TS
Sbjct: 679 PAPTTPKKPAPKELAPTTTKEPTS 702
Score = 30.4 bits (67), Expect = 2.5
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 69 KSPFGSTERK---TPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++ T K+ AP K T T +P K P E + TPE
Sbjct: 557 KKPAPTTPKEPAPTTPKETAPTTPKKLTPT---TPEKLAPTTPEKPAPTTPEELAPTTPE 613
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP 161
+P + P +TP+ PKE A ++ E P
Sbjct: 614 EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 649
Score = 29.6 bits (65), Expect = 4.2
Identities = 45/214 (21%), Positives = 69/214 (32%), Gaps = 25/214 (11%)
Query: 32 ELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKV 91
E S + E E ET+ T GK + + KT K LAP +
Sbjct: 232 ETSLTVNKETTVETKETTTTNK----QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVL 287
Query: 92 KTKTPKHSPIKE----------------EPCGSLSETVCKRELRSQETPEKPRSSVDTPP 135
TPK + EP + + ++S T K + T
Sbjct: 288 AKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 347
Query: 136 RLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVA 195
+TP++ T KE A ++ E P +T E P +P ++PKK
Sbjct: 348 APTTPKEPAPTTTKEPAPTTPKEPAP-TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 406
Query: 196 RCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPS 229
P A T P+ ++P P+
Sbjct: 407 ----PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 436
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.8 bits (81), Expect = 0.059
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 19/174 (10%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
K P +T +K K+LAP +K T T P P G+ + TP++P
Sbjct: 718 KEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGT-----------APTTPKEPA 766
Query: 129 SSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP--YLSTTEMYLCRWHQPPPSPLPLRES 186
+ P +TP+ T KE A ++ + P TT P+P +E+
Sbjct: 767 PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKET 826
Query: 187 SP--KKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDS 238
+P KE P+ ET P P P+ + ++ D+S
Sbjct: 827 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVSTPTTTKEPTTIHKSPDES 876
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/144 (23%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 47 ETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPC 106
E + T P +P K P +T + P P + TK P + KE
Sbjct: 357 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEP--APTTTKEPAPTTPKEPAP 414
Query: 107 GSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTT 166
+ E + TP++P + P +TP++ T PKE ++ E P TT
Sbjct: 415 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP---TT 471
Query: 167 EMYLCRWHQPPPSPLPLRESSPKK 190
+ P +P ++PKK
Sbjct: 472 K------EPAPTTPKEPAPTAPKK 489
Score = 34.3 bits (77), Expect = 0.17
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 2 ERRMQLVKKDNEKERHK----------------LFQGYETEEREETELSEKIKLECQPEL 45
E + +L KDN+K R K L G +T ++ K+ P++
Sbjct: 193 ELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKI 252
Query: 46 SETSQTLPPKPFSCGRSGKGHK-----RKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSP 100
+ T++ + P+P S + K T+ T K K KT + K +
Sbjct: 253 T-TAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQ 311
Query: 101 IKEEPCGSLSETVCKRELRSQETPEKPRSSVDTP---PRLSTPQKGPSTHPKEKAFSSEI 157
S+ +T K + + KP +T P L+TP++ T PKE A ++
Sbjct: 312 -------SIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPK 364
Query: 158 EDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
E P +T + +P P+ ++PK+
Sbjct: 365 EPTP--TTIKSAPTTPKEPAPTTTKSAPTTPKE 395
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E T + K E P E + T P +P T K P
Sbjct: 454 TTPKEPTPTTPK---EPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 510
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSL--SETVCKRELRSQETP-----EKPRSSVDTPPRL 137
E S K P + K P + + T K + + P ++P + P
Sbjct: 511 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Query: 138 STPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKK 190
+TP+K T PKE A ++ E P + P +P ++PKK
Sbjct: 571 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKK 623
Score = 33.1 bits (74), Expect = 0.38
Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 17/172 (9%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
T +E + K P+ + T P P + + K +P T KK
Sbjct: 391 TTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAP-------TTPKKP 443
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGP 144
AP K T P P E + + TP++P + P +TP++
Sbjct: 444 APTTPKEPAPTTPKEPTPTTP----KEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA 499
Query: 145 STHPKEKAFSSEIEDLPYL------STTEMYLCRWHQPPPSPLPLRESSPKK 190
T PKE A ++ E P +TT+ +P P+ ++PK+
Sbjct: 500 PTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 551
Score = 31.2 bits (69), Expect = 1.5
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 69 KSPFGSTERKTPV---KKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++T KKL P + T P P L+ T E + TPE
Sbjct: 606 KEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTP-EELAPTT--PEEPTPTTPE 662
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRE 185
+P + +TP++ T PKE A ++ E P TT +P L+E
Sbjct: 663 EPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP---TTPKETAPTTPKGTAPTTLKE 719
Query: 186 SSPKKEETVA-RCLMPSSVAGETS 208
+P + A + L P++ TS
Sbjct: 720 PAPTTPKKPAPKELAPTTTKEPTS 743
Score = 30.4 bits (67), Expect = 2.5
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 69 KSPFGSTERK---TPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPE 125
K P +T ++ T K+ AP K T T +P K P E + TPE
Sbjct: 598 KKPAPTTPKEPAPTTPKETAPTTPKKLTPT---TPEKLAPTTPEKPAPTTPEELAPTTPE 654
Query: 126 KPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP 161
+P + P +TP+ PKE A ++ E P
Sbjct: 655 EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 690
Score = 29.6 bits (65), Expect = 4.2
Identities = 45/214 (21%), Positives = 69/214 (32%), Gaps = 25/214 (11%)
Query: 32 ELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKV 91
E S + E E ET+ T GK + + KT K LAP +
Sbjct: 273 ETSLTVNKETTVETKETTTTNK----QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVL 328
Query: 92 KTKTPKHSPIKE----------------EPCGSLSETVCKRELRSQETPEKPRSSVDTPP 135
TPK + EP + + ++S T K + T
Sbjct: 329 AKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKS 388
Query: 136 RLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVA 195
+TP++ T KE A ++ E P +T E P +P ++PKK
Sbjct: 389 APTTPKEPAPTTTKEPAPTTPKEPAP-TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT 447
Query: 196 RCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPS 229
P A T P+ ++P P+
Sbjct: 448 ----PKEPAPTTPKEPTPTTPKEPAPTTKEPAPT 477
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 35.8 bits (81), Expect = 0.059
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 13/244 (5%)
Query: 46 SETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEF---SKVKTKTPKHS-PI 101
S +S T KP + K HK K S E K+ K+ + + SK +K PK + P+
Sbjct: 186 SSSSSTSFSKPH---KLMKEHKEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPL 242
Query: 102 KEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLP 161
KEE + + + P+ ++ + P K P E+ + + +
Sbjct: 243 KEEKIVPKMAFKEPKPMSKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELSAKKRKK-- 300
Query: 162 YLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVE 221
S++E + PP L L S+ KK+ + V E+ +
Sbjct: 301 --SSSEALFKSFSSAPP--LILTCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFD 356
Query: 222 PLRDPNPSDLLENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGI 281
+ DPN SD+ EN+ S++ + + + R+Q L+ + ++
Sbjct: 357 DIVDPNDSDVEENISSKSDSEQPSPASSSSSSSSSFTPSQTRQQGPLRSIMKDLHSDDNE 416
Query: 282 QESE 285
+ES+
Sbjct: 417 EESD 420
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 35.8 bits (81), Expect = 0.059
Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 35/117 (29%)
Query: 124 PEKPRSSVDTPPRLSTP----------QKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRW 173
P KPRS P L+ P P + P + + +++ P +S +
Sbjct: 674 PSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQ------ 727
Query: 174 HQPPPSPLPLRESSP---KKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPN 227
PPPSP P P KK E V PS + + EPL+DPN
Sbjct: 728 -SPPPSPPPSYHPPPPPTKKPEVVVEA---------------PSASETAEEPLQDPN 768
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 35.8 bits (81), Expect = 0.059
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 32/186 (17%)
Query: 9 KKDNEKERHKLFQGYETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKR 68
KK+ EKE+ + ++ R T + +P S++ + +S R +R
Sbjct: 266 KKEKEKEKTRPRSRSRSKSRSRTR--SRSPSHTRPRRRHRSRS---RSYSPRRRPSPRRR 320
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLS-ETVCKRELRSQETPEKP 127
SP R+TP +++ P ++++P + SLS + RS+ P+KP
Sbjct: 321 PSP----RRRTPPRRMPPPPRHRRSRSPVRR--RRRSSASLSGSSSSSSSSRSRSPPKKP 374
Query: 128 RSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESS 187
+PPR T + PS P + PP +P P S
Sbjct: 375 PKRTSSPPR-KTRRLSPSASPPRRRHRP-------------------SPPATPPPKTRHS 414
Query: 188 PKKEET 193
P +++
Sbjct: 415 PTPQQS 420
Score = 33.5 bits (75), Expect = 0.29
Identities = 43/182 (23%), Positives = 66/182 (36%), Gaps = 21/182 (11%)
Query: 62 SGKGHKRKSPFGSTERKTPVKKLAPEFSKVKT-------KTPKHSPIKEEPCGSLSETVC 114
S +G +R+SP R+ AP + +T +TP P + P
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 600
Query: 115 KRELRSQETPEKPRSSVDTPP-RLSTPQKGP------STHPKEKAFSSEIEDLPYLSTTE 167
+R P++ +S PP R ++P P S PK+++ P LS+
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 168 MYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPN 227
+ P S R P K + + P A +TS P R S P R +
Sbjct: 661 R---KGSSPSRSTREARSPQPNKRHSPS----PRPRAPQTSSSPPPVRRGASSSPQRRQS 713
Query: 228 PS 229
PS
Sbjct: 714 PS 715
>gi|41281808 harmonin isoform b3 [Homo sapiens]
Length = 899
Score = 35.4 bits (80), Expect = 0.077
Identities = 61/252 (24%), Positives = 91/252 (36%), Gaps = 65/252 (25%)
Query: 2 ERRMQLVKKDNEKERHKLFQGYETEEREETELSEKIKL----ECQPELSETSQ------- 50
+ + ++++K+ + + ++L Q ERE+ E SEKI+ CQ L + S
Sbjct: 451 KEKEEMLEKEKQLKINRLAQEVSETEREDLEESEKIQYWVERLCQTRLEQISSADNEISE 510
Query: 51 --TLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGS 108
T PP P R+ G T + + + KTP P+ P
Sbjct: 511 MTTGPPPPPPSVSPLAPPLRRFAGGLHLHTTDLDDIPLDMFYYPPKTPSALPVMPHP--- 567
Query: 109 LSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEM 168
P P V PP L P G A SS P++ T
Sbjct: 568 --------------PPSNPPHKVPAPPVL--PLSG-----HVSASSS-----PWVQRT-- 599
Query: 169 YLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSV----------AGETSVLAVPSW--R 216
PPP P+P S P ++ T R L PS++ G+T V W +
Sbjct: 600 -------PPPIPIPPPPSVPTQDLTPTRPL-PSALEEALSNHPFRTGDTG-NPVEDWEAK 650
Query: 217 DHSVEPLRDPNP 228
+HS +P P P
Sbjct: 651 NHSGKPTNSPVP 662
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.4 bits (80), Expect = 0.077
Identities = 51/187 (27%), Positives = 69/187 (36%), Gaps = 27/187 (14%)
Query: 29 EETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVK-KLAPE 87
EE LS + + +P LS P +P C + H G P + L+P+
Sbjct: 757 EEPHLSPQAE---EPHLSPQ----PEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQ 809
Query: 88 FSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR-SSVDTPPRLSTPQKGPST 146
T+ P SP+ EEPC S +S+E PR P L P P
Sbjct: 810 -----TEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRP 864
Query: 147 H--PKEKAFSSEIEDLPYLSTT----------EMYLCRWHQPPPSPLPLR-ESSPKKEET 193
P+E E+LP E L +PP SPLP SP E +
Sbjct: 865 EKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPS 924
Query: 194 VARCLMP 200
++ LMP
Sbjct: 925 LSPQLMP 931
Score = 30.8 bits (68), Expect = 1.9
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 8/120 (6%)
Query: 96 PKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTP-QKGP-STHPKEKAF 153
P+ SP+ P S + + S E P S + LS P ++ P S P+E
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503
Query: 154 SSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVP 213
S E P+ E L + PPSP SP E + P S E S L+ P
Sbjct: 504 SPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEAS------PLSPPFEESPLSPP 557
Score = 30.8 bits (68), Expect = 1.9
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 27/123 (21%)
Query: 176 PPPSPLPLRESSPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENL 235
PPPSPL +SP E V +P+ E V P+P L +
Sbjct: 4916 PPPSPLAPSPASPPTEPLVE---LPTEPLAEPPV----------------PSPLPLASSP 4956
Query: 236 DDSVFSKRHAKLELDEKRR----KRWDIQRIREQRILQRLQLRMYKKKGIQESEPEVTSF 291
+ + R E E R K+W + +R +R+ RL L + K G QE E EV F
Sbjct: 4957 ESARPKPRARPPEEGEDSRPPRLKKW--KGVRWKRL--RLLLTIQKGSGRQEDEREVAEF 5012
Query: 292 FPE 294
+
Sbjct: 5013 MEQ 5015
Score = 30.4 bits (67), Expect = 2.5
Identities = 69/281 (24%), Positives = 99/281 (35%), Gaps = 54/281 (19%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
+SP ++P PE S++ + P+ SP P S + + L S E P
Sbjct: 668 ESPLSPPPEESPTSP-PPEASRL-SPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPL 725
Query: 129 SSVDTPPRLSTPQKGP-----------STHPKEKAFSSEIEDLPYLSTTEMYLCRWHQP- 176
+ P+L +GP S P+E S + E+ P+LS C P
Sbjct: 726 LPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEE-PHLSPQPEEPCLCAVPE 784
Query: 177 PPSPLPLRES---SPKKEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNP--SDL 231
P P E SP+ EE L S E + VP EP P P S L
Sbjct: 785 EPHLSPQAEGPHLSPQPEE-----LHLSPQTEEPHLSPVPE------EPCLSPQPEESHL 833
Query: 232 LENLDDSVFSKRHAKLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQE----SEPE 287
++ S R + L + L++ L +K +E PE
Sbjct: 834 SPQSEEPCLSPRPEESHLSPE---------------LEKPPLSPRPEKPPEEPGQCPAPE 878
Query: 288 VTSFFPEPDDVESLMITPFLPVVAFGRP-LPKLTPQNFELP 327
FP P + ++P L A P P L+P ELP
Sbjct: 879 ELPLFPPPGEPS---LSPLLGEPALSEPGEPPLSPLPEELP 916
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.0 bits (79), Expect = 0.10
Identities = 71/340 (20%), Positives = 133/340 (39%), Gaps = 62/340 (18%)
Query: 23 YETEEREETELSEK---IKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKT 79
Y EE EE E+ + E P + +P KP + K P ++K
Sbjct: 9921 YLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVP--------EEKKPVPVPKKKE 9972
Query: 80 PVKKLAPEF-SKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETP-------EKPRSSV 131
PE K + K P P KE+P + V K+ + ++ P E P + V
Sbjct: 9973 APPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKV 10032
Query: 132 DTPPRLSTPQKG-PSTHPKE-KAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESSPK 189
P+ P+K P PK+ +A +++ ++P E + P+P+P + +P
Sbjct: 10033 PEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPE-------EKKPTPVPKKVEAPP 10085
Query: 190 KEETVARCLMPSSVAGETSVLAVPSWRDHSVEPLRDPNPSDLLENLDDSVFSKRHAKLEL 249
+ VP R+ P+ P ++L ++ + + E
Sbjct: 10086 PK--------------------VPKKREPVPVPVALPQEEEVL--FEEEIVPEEEVLPEE 10123
Query: 250 DEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESE--PEVTSFFPEPDDVESLMITPFL 307
+E + ++ E+ + + ++ +++ E E PE F PE + + + P +
Sbjct: 10124 EEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPE--VKPKV 10181
Query: 308 PVVAFGRPLP----KLTPQNFELPWLDERSRCRL-EIQKK 342
PV A P+P K+T + +P +E ++ E+ KK
Sbjct: 10182 PVPA---PVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKK 10218
Score = 34.7 bits (78), Expect = 0.13
Identities = 50/204 (24%), Positives = 77/204 (37%), Gaps = 36/204 (17%)
Query: 26 EEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLA 85
+E E ++ EK KL+ +P PP P + + K ++K P K
Sbjct: 10864 KEPEPEKVIEKPKLKPRP---------PPPPPAPPKEDVKEKIFQLKAIPKKKVPEKPQV 10914
Query: 86 PEF------------SKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDT 133
PE KV+ P+ P +E E V K LR + E+P+
Sbjct: 10915 PEKVELTPLKVPGGEKKVRKLLPERKPEPKE------EVVLKSVLRKRPEEEEPKVE--- 10965
Query: 134 PPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQ----PPPSPLPLRESSPK 189
P +L +K P E+E +P ++ E + + P PLP E PK
Sbjct: 10966 PKKLEKVKKPAVPEPPPPKPVEEVE-VPTVTKRERKIPEPTKVPEIKPAIPLPAPEPKPK 11024
Query: 190 KEETVARCLMPSSVAGETSVLAVP 213
E V + + P V E + +A P
Sbjct: 11025 PEAEV-KTIKPPPVEPEPTPIAAP 11047
Score = 32.3 bits (72), Expect = 0.65
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 71 PFGSTERKTPVKKLAPEFSK--VKTKTPKHSPIK--EEPCGSLSETVCKRELRSQETPEK 126
P + P KK PE V K P+ P+K E P + E K L + PE
Sbjct: 10687 PAAPPQVTVPPKKPVPEKKAPAVVAKKPELPPVKVPEVPKEVVPEK--KVPLVVPKKPEA 10744
Query: 127 PRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRES 186
P + V P+ P+K + K + +++ ++P E + P P+P R
Sbjct: 10745 PPAKVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLE-------EKPAVPVPERAE 10797
Query: 187 SPKKE 191
SP E
Sbjct: 10798 SPPPE 10802
Score = 32.0 bits (71), Expect = 0.85
Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 25/140 (17%)
Query: 25 TEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKL 84
TEE EE +SE+ E P + E + PP R + K+ P E TPV K
Sbjct: 10238 TEEPEEEPISEEEIPEEPPSIEEVEEVAPP------RVPEVIKKAVP----EAPTPVPK- 10286
Query: 85 APEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR----SSVDTPPRLSTP 140
K + P K+ P + V K+E + PE P+ V P + + P
Sbjct: 10287 -------KVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKEAVP 10339
Query: 141 QKGPSTHPKEK---AFSSEI 157
T +EK AF E+
Sbjct: 10340 PAKGRTVLEEKVSVAFRQEV 10359
Score = 31.2 bits (69), Expect = 1.5
Identities = 47/205 (22%), Positives = 72/205 (35%), Gaps = 40/205 (19%)
Query: 24 ETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRK----SPFGSTERKT 79
E E + E + EK+K PE PPKP KR+ P E K
Sbjct: 10959 EEEPKVEPKKLEKVKKPAVPEPP------PPKPVEEVEVPTVTKRERKIPEPTKVPEIKP 11012
Query: 80 PVKKLAPEFS---KVKTKTPKHSPIKEEPC-----------GSLSETVCKRELRSQE--- 122
+ APE + + KT K P++ EP G +E +E ++
Sbjct: 11013 AIPLPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGP 11072
Query: 123 ---TPEKPRSSVDTPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPS 179
P+K S ++ R P G P E F+ +++ +P E+
Sbjct: 11073 IKGVPKKTPSPIEAERRKLRPGSGGEKPPDEAPFTYQLKAVPLKFVKEI----------K 11122
Query: 180 PLPLRESSPKKEETVARCLMPSSVA 204
+ L ES + CL+ S A
Sbjct: 11123 DIILTESEFVGSSAIFECLVSPSTA 11147
Score = 29.3 bits (64), Expect = 5.5
Identities = 47/216 (21%), Positives = 74/216 (34%), Gaps = 40/216 (18%)
Query: 14 KERHKLFQGY-ETEEREETELSEKIKLECQPELSETS-----------QTLPPKPFSCGR 61
+E ++ +GY E EE E E+ ++ Q E+ E S + PP P +
Sbjct: 9124 QEYYEREEGYDEGEEEWEEAYQEREVIQVQKEVYEESHERKVPAKVPEKKAPPPPKVIKK 9183
Query: 62 SGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEE------PCGSLSETVCK 115
K+ E K V K+ K+ + P +P++EE P + V
Sbjct: 9184 PVIEKIEKTSRRMEEEKVQVTKVPEVSKKIVPQKPSRTPVQEEVIEVKVPAVHTKKMVIS 9243
Query: 116 RELRSQETPEKPRSSVDTP-----------------PRLSTPQKGPSTHPKEKAFSSEIE 158
E + + SV P R+ P K P EK E+
Sbjct: 9244 EEKMFFASHTEEEVSVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPEL--PEKPAPEEVA 9301
Query: 159 DLPYLSTTEMYLCRWHQPPPSPLPLRESS---PKKE 191
+P E + + P P+P + PKKE
Sbjct: 9302 PVPIPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKE 9337
Score = 28.5 bits (62), Expect = 9.4
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 47 ETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPC 106
+T +PPKP S + K+ + +P++ V+ TP SP++
Sbjct: 252 KTPPRIPPKPKSRSPTPPSIAAKAQLARQQSPSPIRHSPSPVRHVRAPTP--SPVRSVSP 309
Query: 107 GSLSETVCKRELRSQETPEKPR-SSVDTPPRLSTPQK 142
+ T R +RS K + S+V T P + P K
Sbjct: 310 AARISTSPIRSVRSPLLMRKTQASTVATGPEVPPPWK 346
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 35.0 bits (79), Expect = 0.10
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 44 ELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHS-PIK 102
++S+ + +PP+P + G K + +P +++ P + PE SK K P+ S P+K
Sbjct: 1297 QVSQPALVIPPQPPTTGPPRKEVPKTTPSEPKKKQPPPPESGPEQSKQKKVAPRPSIPVK 1356
Query: 103 EEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQKGPSTHPK 149
++P + + + P + + T LST G S+ K
Sbjct: 1357 QKP-----------KEKEKPPPVNKQENAGTLNILSTLSNGNSSKQK 1392
Score = 32.3 bits (72), Expect = 0.65
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 69 KSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPR 128
K+ S+++ TP + P K ++ P P+ EE + + E + TP +
Sbjct: 1235 KNVVDSSQKPTPSAREDPAPKKSSSEPPPRKPV-EEKSEEGNVSAPGPESKQATTPASRK 1293
Query: 129 SSVD-TPPRLSTPQKGPSTHPKEKAFSSEIEDLPYLSTTEMYLCRWHQPPPSPLPLRESS 187
SS + P L P + P+T P K ++P + +E + QPPP +S
Sbjct: 1294 SSKQVSQPALVIPPQPPTTGPPRK-------EVPKTTPSEP---KKKQPPPPESGPEQSK 1343
Query: 188 PKK 190
KK
Sbjct: 1344 QKK 1346
>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
Length = 4377
Score = 35.0 bits (79), Expect = 0.10
Identities = 53/232 (22%), Positives = 86/232 (37%), Gaps = 32/232 (13%)
Query: 8 VKKDNEKERHKLFQGYETEEREETELSEKIKLE-----CQP-ELSETSQTLPPKP--FSC 59
+ K+ + +H F E E+ +E+S+ K + C P E +ETS T P FS
Sbjct: 2999 MSKETVETQH--FNSIEDEKVTYSEISKVSKHQSYVGLCPPLEETETSPTKSPDSLEFSP 3056
Query: 60 GRSGK-----------GHKRKSPFGSTERKTPVKKLAPEFSKVKTKTPKHSPIKEEPCGS 108
G+ G ++ +P TE +K L S V+ I++
Sbjct: 3057 GKESPSSDVFDHSPIDGLEKLAPLAQTEGGKEIKTLPVYVSFVQVGKQYEKEIQQGGVKK 3116
Query: 109 LSETVCKR---------ELRSQETPEKPRSSV--DTPPRLSTPQKGPSTHPKEKAFSSEI 157
+ CK R Q+ P P+ S DT ++S + + SSE
Sbjct: 3117 IISQECKTVQETRGTFYTTRQQKQPPSPQGSPEDDTLEQVSFLDSSGKSPLTPETPSSEE 3176
Query: 158 EDLPYLSTTEMYLCRWHQPPPSPLPLRESSPKKEETVARCLMPSSVAGETSV 209
+ S T L + PSP+P ++EE + + ET+V
Sbjct: 3177 VSYEFTSKTPDSLIAYIPGKPSPIPEVSEESEEEEQAKSTSLKQTTVEETAV 3228
>gi|7706589 GNAS complex locus NESP55 [Homo sapiens]
Length = 245
Score = 34.7 bits (78), Expect = 0.13
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 26/130 (20%)
Query: 23 YETEEREETELSEKIKLECQPELSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVK 82
YETE E+E+ + E +P ET+ T P+ G + S FG +
Sbjct: 109 YETESETESEIESETDFETEP---ETAPTTEPETEPEDDRGPVVPKHSTFG--------Q 157
Query: 83 KLAPEFSKVKTKTPKHSPIKEEPCGSLSETVCKRELRSQETPEKPRSSVDTPPRLSTPQ- 141
L +K ++P SP + P S + P+ PR + P P+
Sbjct: 158 SLTQRLHALKLRSPDASPSRAPP--------------STQEPQSPREGEELKPEDKDPRD 203
Query: 142 KGPSTHPKEK 151
S PKE+
Sbjct: 204 PEESKEPKEE 213
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,849,756
Number of Sequences: 37866
Number of extensions: 931199
Number of successful extensions: 5536
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 5050
Number of HSP's gapped (non-prelim): 666
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.