Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIAA1267 Sequence: fasta or formatted (1105aa) NCBI GI: 32698714
Description:

hypothetical protein LOC284058

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         89           3
 C cysteine            1.3         14           1
 D aspartate           4.9         54           2
 E glutamate           6.4         71           4
 F phenylalanine       1.5         17           1
 G glycine             4.6         51           2
 H histidine           4.0         44           2
 I isoleucine          3.1         34           2
 K lysine              5.1         56           2
 L leucine            10.4        115           2
 M methionine          1.4         15           1
 N asparagine          3.5         39           2
 P proline             7.7         85           4
 Q glutamine           4.4         49           2
 R arginine            7.4         82           4
 S serine             13.2        146           4
 T threonine           6.4         71           3
 V valine              4.9         54           2
 W tryptophan          0.8          9           1
 Y tyrosine            0.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC284058 
LOC100294337          0.368   PREDICTED: hypothetical protein XP_002344104 isofor...
LOC100294337          0.368   PREDICTED: hypothetical protein XP_002344105 isofor...
LOC100294337          0.368   PREDICTED: hypothetical protein XP_002344106 isofor...
C2orf67               0.096   hypothetical protein LOC151050 
TNRC18                0.008   trinucleotide repeat containing 18 
LOC100170229          0.008   hypothetical protein LOC100170229 
RSPH4A                0.007   radial spoke head 4 homolog A isoform 2 
RSPH4A                0.007   radial spoke head 4 homolog A isoform 1 
MUC17                 0.007   mucin 17 
LOC100132247          0.007   hypothetical protein LOC100132247 
TTBK1                 0.007   tau tubulin kinase 1 
NFAT5                 0.007   nuclear factor of activated T-cells 5 isoform a [Hom...
NFAT5                 0.007   nuclear factor of activated T-cells 5 isoform c [Homo...
NFAT5                 0.007   nuclear factor of activated T-cells 5 isoform d [Ho...
NFAT5                 0.007   nuclear factor of activated T-cells 5 isoform b [Ho...
NFAT5                 0.007   nuclear factor of activated T-cells 5 isoform a [Hom...
RIMS1                 0.007   regulating synaptic membrane exocytosis 1 
MDC1                  0.006   mediator of DNA-damage checkpoint 1 
MDM2                  0.006   mouse double minute 2 homolog isoform MDM2g 
PHF1                  0.006   PHD finger protein 1 isoform b 
LRRC37A3              0.006   leucine rich repeat containing 37, member A3 
PER3                  0.006   period 3 
ARHGAP21              0.006   Rho GTPase activating protein 21 
SRRM2                 0.006   splicing coactivator subunit SRm300 
C12orf24              0.006   hypothetical protein LOC29902 
IWS1                  0.006   IWS1 homolog 
ZNF282                0.006   zinc finger protein 282 
LRRC37A2              0.006   c114 SLIT-like testicular protein 
LRRC37A               0.006   leucine rich repeat containing 37A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press