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Search of human proteins with 149193331
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149193331 tripartite motif protein 15 [Homo sapiens]
(465 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149193331 tripartite motif protein 15 [Homo sapiens] 946 0.0
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 387 e-107
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 281 9e-76
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 278 6e-75
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 255 7e-68
gi|5730009 ret finger protein [Homo sapiens] 249 3e-66
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 249 5e-66
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 234 1e-61
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 222 6e-58
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 207 1e-53
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 205 8e-53
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 205 8e-53
gi|15208660 tripartite motif protein 21 [Homo sapiens] 204 1e-52
gi|4557743 Mediterranean fever protein [Homo sapiens] 201 9e-52
gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens] 199 4e-51
gi|37622899 ring finger protein 137 [Homo sapiens] 195 8e-50
gi|44680130 tripartite motif-containing 7 isoform 2 [Homo sapiens] 185 7e-47
gi|44680128 tripartite motif-containing 7 isoform 3 [Homo sapiens] 182 6e-46
gi|44680126 tripartite motif-containing 7 isoform 3 [Homo sapiens] 182 6e-46
gi|44680124 tripartite motif-containing 7 isoform 3 [Homo sapiens] 182 6e-46
gi|22749269 ring finger protein 129 [Homo sapiens] 173 3e-43
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 172 4e-43
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 172 4e-43
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 161 1e-39
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 161 1e-39
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 161 1e-39
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 157 2e-38
gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens] 154 1e-37
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 152 8e-37
gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens] 151 1e-36
>gi|149193331 tripartite motif protein 15 [Homo sapiens]
Length = 465
Score = 946 bits (2445), Expect = 0.0
Identities = 465/465 (100%), Positives = 465/465 (100%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC
Sbjct: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
Query: 61 QEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLD 120
QEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLD
Sbjct: 61 QEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLD 120
Query: 121 EAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQEL 180
EAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQEL
Sbjct: 121 EAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQEL 180
Query: 181 EQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRV 240
EQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRV
Sbjct: 181 EQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRV 240
Query: 241 NQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDP 300
NQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDP
Sbjct: 241 NQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDP 300
Query: 301 QTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDG 360
QTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDG
Sbjct: 301 QTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDG 360
Query: 361 GGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVALD 420
GGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVALD
Sbjct: 361 GGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVALD 420
Query: 421 YEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTLKG 465
YEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTLKG
Sbjct: 421 YEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTLKG 465
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 387 bits (994), Expect = e-107
Identities = 203/464 (43%), Positives = 284/464 (61%), Gaps = 16/464 (3%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEE------------ 63
C +C G L + VTI CGH FCR CL ++ + CPLC+E
Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPNWQL 75
Query: 64 ----EQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFL 119
E E LG E C+EHGEKIYFFCE+D LCV CRE H HT+ FL
Sbjct: 76 ANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHATHTMRFL 135
Query: 120 DEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQE 179
++A PYR+++ L+ L ER+EI++++ +E++++QVLLTQ+ +K+ QV + F L++
Sbjct: 136 EDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISEFAHLRKF 195
Query: 180 LEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVR 239
LE+Q+ +LLA+L + I ++RDE+ V+ E+ R A ++ELEEK ++PA ELL D+R
Sbjct: 196 LEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEEKNERPARELLTDIR 255
Query: 240 VNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLD 299
RCE + P A+SP+L ++IRDF ++ L L M+MF E L L+ + I+LD
Sbjct: 256 STLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEKLCFELDYEPAHISLD 315
Query: 300 PQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGD 359
PQT+ L+LSED + +++ + ++ PD+P RFD VL G + GRH W V + L
Sbjct: 316 PQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGITGGRHTWVVSIDLAH 375
Query: 360 GGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVAL 419
GG CTVGV E V+RKGE+ L E+GVWAV ++ A S T L L E PR VRV+L
Sbjct: 376 GGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPTRLTLKEQPRQVRVSL 435
Query: 420 DYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTL 463
DYE G VT NA T+EPI+TFTASF+ KV PFF +W +GS +L
Sbjct: 436 DYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSSFSL 479
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 281 bits (719), Expect = 9e-76
Identities = 178/542 (32%), Positives = 272/542 (50%), Gaps = 82/542 (15%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
M + L+ + E C++C L D VTI CGH FCR C + + SG +CPLC
Sbjct: 1 MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPI----SGSRPVCPLC 56
Query: 61 QEEEQAETPMAPVPLGPLGETY-----------------------CEEHGEKIYFFCEND 97
++ + E L L E CE H EK++++CE+D
Sbjct: 57 KKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDD 116
Query: 98 AEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQV 157
+ LCV CRE H+ HT +++A QP+R+++ + L L +RD+I+ + + + +
Sbjct: 117 GKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILA 176
Query: 158 LLTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLG 217
L +++ ++ + FE+ Q L ++ LL +L +LEQ++ + R+++ ++ E+ RL
Sbjct: 177 ALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLA 236
Query: 218 AQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEM 277
+ ELE K QQPA+EL+QD R +R K F + I+ + KK +F K+L+L
Sbjct: 237 LVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRG 296
Query: 278 MRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPA 337
+R F L LE + +TLDPQ+AS L LSED K V YT KS P +FD P
Sbjct: 297 LREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPG 356
Query: 338 VLGFPGFSSGRHRWQVDLQ---------------------------LGDG---------- 360
VLG GF+ G+ W+V+++ GDG
Sbjct: 357 VLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDE 416
Query: 361 ------------------GGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSP 402
C VGVA + V+RKG++ L EDGVWA+ +S WA+TSP
Sbjct: 417 ESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSP 476
Query: 403 GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLT 462
+L + PR V +ALDYE G VT NA++QE I+TFTA+F+ ++ PF + G+ L
Sbjct: 477 EAELFPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLL 536
Query: 463 LK 464
L+
Sbjct: 537 LR 538
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 278 bits (712), Expect = 6e-75
Identities = 146/365 (40%), Positives = 216/365 (59%), Gaps = 17/365 (4%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEE------------ 63
C +C G L + VTI CGH FCR CL ++ + CPLC+E
Sbjct: 16 CPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPNWQL 75
Query: 64 ----EQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFL 119
E E LG E C+EHGEKIYFFCE+D LCV CRE H HT+ FL
Sbjct: 76 ANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHATHTMRFL 135
Query: 120 DEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQE 179
++A PYR+++ L+ L ER+EI++++ +E++++QVLLTQ+ +K+ QV + F L++
Sbjct: 136 EDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISEFAHLRKF 195
Query: 180 LEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVR 239
LE+Q+ +LLA+L + I ++RDE+ V+ E+ R A ++ELEEK ++PA ELL D+R
Sbjct: 196 LEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEEKNERPARELLTDIR 255
Query: 240 VNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLD 299
RCE + P A+SP+L ++IRDF ++ L L M+MF E L L+ + I+LD
Sbjct: 256 STLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEKLCFELDYEPAHISLD 315
Query: 300 PQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQL-G 358
PQT+ L+LSED + +++ + ++ PD+P RFD VL G + GRH W ++ G
Sbjct: 316 PQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGITGGRHTWVWMARVPG 375
Query: 359 DGGGC 363
D G C
Sbjct: 376 DSGCC 380
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 255 bits (651), Expect = 7e-68
Identities = 159/484 (32%), Positives = 249/484 (51%), Gaps = 39/484 (8%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCL------PALSQMGAQSSGKI--LLCPLCQE----- 62
C++C + V++ CGH+FCR C+ P +GA + L CP C+E
Sbjct: 29 CSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFPLPCPQCREPARPS 88
Query: 63 EEQAETPMAPV---------PLGPLGE------------TYCEEHGEKIYFFCENDAEFL 101
+ + +A V P GE C +HGE +C++D +
Sbjct: 89 QLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAI 148
Query: 102 CVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQ 161
CV C H+ H V LDEA+Q ++ L SRL L E ++ E + E ++ + LL Q
Sbjct: 149 CVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLKQ 208
Query: 162 IESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVK 221
+ +++ +V F+ L+ L +Q LL RL EL +++ ++++E + ++ E+T+L
Sbjct: 209 MAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEITQLSKLSS 268
Query: 222 ELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMF 281
+++E Q+P + LQ+ + SRC P +S ++ K+ + K L M++ F
Sbjct: 269 QIQETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGMLKKF 328
Query: 282 SENLAHHLEIDSGV-ITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLG 340
E+L LE + V +TLDP TA+ L+LS D K VR + + LP+ P RFD VL
Sbjct: 329 KEDLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPCRFDTNTRVLA 388
Query: 341 FPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWAST 400
GFSSGRH W+V ++G G GVA E VRRKG + E+GVWA+ ++ Q WA T
Sbjct: 389 SCGFSSGRHHWEV--EVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQLNGGQYWAVT 446
Query: 401 SP-GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGS 459
SP + L + R VRVALD E G V+ + + ++TF +F +VFP F+V G+
Sbjct: 447 SPERSPLSCGHLSR-VRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGT 505
Query: 460 CLTL 463
L +
Sbjct: 506 YLRI 509
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 249 bits (637), Expect = 3e-66
Identities = 159/471 (33%), Positives = 253/471 (53%), Gaps = 34/471 (7%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQE-----EEQAETPM 70
C +C + + + CGH C CL G + + CP C+E + +
Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACLARC--WGTAETN--VSCPQCRETFPQRHMRPNRHL 71
Query: 71 APV-----------PLGPLGET-YCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGF 118
A V P GP GE CE+H E + +CE D +CV C H+ H+V
Sbjct: 72 ANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHRGHSVLP 131
Query: 119 LDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQ 178
L+EA++ ++++++++L+ L +D + + Q +Q LL+ + ++ ++ FE+L
Sbjct: 132 LEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWEFEQLYH 191
Query: 179 ELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDV 238
L++ LLARL EL+ I+ + IT+ S ++ L + + +LEEK QQP ELLQD+
Sbjct: 192 SLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQQQPTRELLQDI 251
Query: 239 RVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLE-------- 290
SR E P PDL +KI F +K L L E ++ F+E + +E
Sbjct: 252 GDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQSDMEKIQELREA 311
Query: 291 -IDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRH 349
+ S +TLDP TA SL+LS++ + VRY+ ++ LPD+P RF+ P VLG P F +GRH
Sbjct: 312 QLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRH 371
Query: 350 RWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISH-QQCWASTSPGTDLPL 408
W+V ++GD T+GV + V RKG + + ++G WAV + + ++ WA TSP T LPL
Sbjct: 372 YWEV--EVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWALTSPMTALPL 429
Query: 409 SEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFT-ASFSGKVFPFFAVWKKG 458
+ V + LDY+AG+V+ +N + FTF+ A+F G V P+F++ G
Sbjct: 430 RTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG 480
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 249 bits (635), Expect = 5e-66
Identities = 150/455 (32%), Positives = 241/455 (52%), Gaps = 34/455 (7%)
Query: 15 ACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVP 74
+C++C L++ V I CGH FC+ C+ + + CP+C++ + +
Sbjct: 28 SCSVCLEYLKEPVIIECGHNFCKACITRWWE----DLERDFPCPVCRKTSRYRSLRPNRQ 83
Query: 75 LGPL---------------GETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFL 119
LG + E+ C +H E + FC D E +C+ C TH+AHTV L
Sbjct: 84 LGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPL 143
Query: 120 DEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQE 179
D+A Q Y+++L+ LE L + EI K E++K L +ES++ Q+ FE L +
Sbjct: 144 DDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRR 203
Query: 180 LEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVR 239
L++++ +LL+RL E EQ I + E + ++ L E+E KC Q E+L+DV+
Sbjct: 204 LDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVK 263
Query: 240 VNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLD 299
+CE + ++S +L K +F R+ L ++++ + +TLD
Sbjct: 264 STLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLIAD-----------VTLD 312
Query: 300 PQTASRSLVLSEDRKSVRYTRQK-KSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLG 358
P+TA +LVLSEDRKSV++ + + LPD+P RF P VL GF+SGRH W+V ++G
Sbjct: 313 PETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEV--EVG 370
Query: 359 DGGGCTVGVAGEGVRRKGEMGLSAEDGVWAV-IISHQQCWASTSPGTDLPLSEIPRGVRV 417
D VGV + V RKGE+ E G W V + + + A+T+P T L + P+ V +
Sbjct: 371 DKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGI 430
Query: 418 ALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFF 452
LDYEAG ++ +N + I+TFT +F+ K++P F
Sbjct: 431 FLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLF 465
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 234 bits (598), Expect = 1e-61
Identities = 151/485 (31%), Positives = 242/485 (49%), Gaps = 64/485 (13%)
Query: 15 ACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVP 74
+C++C L++ V I CGH FC+ C+ + + CP+C++ + +
Sbjct: 28 SCSVCLEYLKEPVIIECGHNFCKACITRWWE----DLERDFPCPVCRKTSRYRSLRPNRQ 83
Query: 75 LGPL---------------GETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFL 119
LG + E+ C +H E + FC D E +C+ C TH+AHTV L
Sbjct: 84 LGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTHRAHTVVPL 143
Query: 120 DEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQE 179
D+A Q Y+++L+ LE L + EI K E++K L +ES++ Q+ FE L +
Sbjct: 144 DDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILREFEELHRR 203
Query: 180 LEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVR 239
L++++ +LL+RL E EQ I + E + ++ L E+E KC Q E+L+DV+
Sbjct: 204 LDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSGFEMLKDVK 263
Query: 240 VNQ------------------------------SRCEMKTFVSPEAISPDLVKKIRDFHR 269
+RCE + ++S +L K +F R
Sbjct: 264 STLEKNIPRKFGGSLSTICPRDHKALLGLVKEINRCEKVKTMEVTSVSIELEKNFSNFPR 323
Query: 270 KILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQK-KSLPDS 328
+ L ++++ + +TLDP+TA +LVLSEDRKSV++ + + LPD+
Sbjct: 324 QYFALRKILKQLIAD-----------VTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDT 372
Query: 329 PLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWA 388
P RF P VL GF+SGRH W+V++ GD VGV + V RKGE+ E G W
Sbjct: 373 PRRFTFYPCVLATEGFTSGRHYWEVEV--GDKTHWAVGVCRDSVSRKGELTPLPETGYWR 430
Query: 389 VIISHQQCWASTS-PGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGK 447
V + + +A+T+ P T L + P+ V + LDYEAG ++ +N + I+TFT +F+ K
Sbjct: 431 VRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEK 490
Query: 448 VFPFF 452
++P F
Sbjct: 491 LWPLF 495
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 222 bits (565), Expect = 6e-58
Identities = 145/468 (30%), Positives = 235/468 (50%), Gaps = 26/468 (5%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSS--GKILLCP 58
M +T S K + E C++C + + V+I CGH++C LC+ + +Q + CP
Sbjct: 1 MASTTSTKKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCP 60
Query: 59 LCQEEEQAETPMAPVPLGPLGETY--------CEEHGEKIYFFCENDAEFLCVFCREGPT 110
C+ ++ LG L E CEEHGE+ + FCE++ + +C C P
Sbjct: 61 QCRAPFHMDSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFCEDEGQLICWRCERAPQ 120
Query: 111 HQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVE 170
H+ HT +++ Q Y+++L+ + L D + K ++ +++ ++ ++
Sbjct: 121 HKGHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRITKWKEKVQIQRQKIR 180
Query: 171 TAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQP 230
+ F+ LQ L ++ L RL + EQQ +Y + + L + + ELEEKCQ
Sbjct: 181 SDFKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNELKSHILELEEKCQGS 240
Query: 231 ASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLE 290
A +LLQ+V SR + EA+S +L + + + + +M+R +H +
Sbjct: 241 AQKLLQNVNDTLSRSWAVKLETSEAVSLEL-HTMCNVSKLYFDVKKMLR------SHQVS 293
Query: 291 IDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHR 350
+TLDP TA L+LSEDR+ V +++ S RF P VLG GF+SGR
Sbjct: 294 -----VTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVLGCEGFTSGRRY 348
Query: 351 WQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCW-ASTSPGTDLPLS 409
++VD +G+G G +GV E V+R M + G W + + ++ + A TSP T L L
Sbjct: 349 FEVD--VGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALTSPPTSLHLH 406
Query: 410 EIPRGVRVALDYEAGQVTLHNAQTQEPIFTF-TASFSGKVFPFFAVWK 456
E P V + LDYEAG V+ +N T IFTF ASFS + P+F V++
Sbjct: 407 EQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQ 454
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 207 bits (528), Expect = 1e-53
Identities = 148/466 (31%), Positives = 218/466 (46%), Gaps = 39/466 (8%)
Query: 3 ATPSLKV-VHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQ 61
A P L + E C +C D V CGH FCR C+ + Q G CP C+
Sbjct: 2 AAPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECI---RRCWGQPEGPYA-CPECR 57
Query: 62 E-------------EEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREG 108
E + AE P P+ + C H E + FC ++ LC C
Sbjct: 58 ELSPQRNLRPNRPLAKMAEMARRLHPPSPVPQGVCPAHREPLAAFCGDELRLLCAACERS 117
Query: 109 PTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQ 168
H AH V L +A + + +L LE L + + + Q D+ + +ES++
Sbjct: 118 GEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQN 177
Query: 169 VETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQ 228
V FERL++ L ++ LL RL E E ++ E + ++ L + ELE +CQ
Sbjct: 178 VLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQ 237
Query: 229 QPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHH 288
PA LLQD++ R + PE + +L R + L E +R F
Sbjct: 238 LPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCR-----VPGLVETLRRF------- 285
Query: 289 LEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGR 348
G +TLDP TA+ L+LSEDR+SV+ +++LPDSP RFD P VLG F+SGR
Sbjct: 286 ----RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGR 341
Query: 349 HRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPL 408
H W+V ++GD +GV E V RK + LSA +G W ++ + ++S PL
Sbjct: 342 HYWEV--EVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFLGS--YYNSSERALAPL 397
Query: 409 SEIPRGVRVALDYEAGQVTLHNAQTQEPIFTF-TASFSGKVFPFFA 453
+ PR V + LDYEAG ++ ++A +F F FSG + P F+
Sbjct: 398 RDPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFS 443
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 205 bits (521), Expect = 8e-53
Identities = 131/457 (28%), Positives = 221/457 (48%), Gaps = 38/457 (8%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVPL 75
C++C L D VTI CGH FCR C+ Q ++ CP+C+ + Q + L
Sbjct: 16 CSICLDYLSDPVTIECGHNFCRSCI----QQSWLDLQELFPCPVCRHQCQEGHFRSNTQL 71
Query: 76 GPLGE------------------TYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVG 117
G + E T CE+H + + FC+ D LC C + P HQ H V
Sbjct: 72 GRMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCTQPPDHQGHHVR 131
Query: 118 FLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ 177
+++A YR R S ++ L + +++ + + +K L +E+++ ++ + FE L
Sbjct: 132 PIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQRQELSSEFEHLN 191
Query: 178 QELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQD 237
Q L++++ +L+RL E E+ ++ IT S L +Q+ ++ E + ELL
Sbjct: 192 QFLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVVELSELSELELLSQ 251
Query: 238 VRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVIT 297
+++ E + SP S L + F + L +++ F I
Sbjct: 252 IKIFY---ESENESSPSIFSIHLKRDGCSFPPQYSALQRIIKKFKVE-----------II 297
Query: 298 LDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQL 357
LDP+TA +L++SED+K VR+T++K+ +P P RF P VLGFP F SGRH W++ ++
Sbjct: 298 LDPETAHPNLIVSEDKKRVRFTKRKQKVPGFPKRFTVKPVVLGFPYFHSGRHFWEI--EV 355
Query: 358 GDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRV 417
GD +G+ + + K SA+ W + + A + T L L R + +
Sbjct: 356 GDKSEWAIGICKDSLPTKARRPSSAQQECWRIELQDDGYHAPGAFPTPLLLEVKARAIGI 415
Query: 418 ALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAV 454
LDYE G+++ +N + I TFT +F+G + P+F V
Sbjct: 416 FLDYEMGEISFYNMAEKSHICTFTDTFTGPLRPYFYV 452
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 205 bits (521), Expect = 8e-53
Identities = 144/471 (30%), Positives = 226/471 (47%), Gaps = 38/471 (8%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
M P + + E C +C L++ V++ CGH+FC C+ + + G + CP C
Sbjct: 1 MAWAPPGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQC 60
Query: 61 QEEEQAETPMAPVPLGPLGETY-------------CEEHGEKIYFFCENDAEFLCVFCRE 107
+ + L L E+ C HGE + FCE D LC C
Sbjct: 61 RGPFRPSGFRPNRQLAGLVESVRRLGLGAGPGARRCARHGEDLSRFCEEDEAALCWVCDA 120
Query: 108 GPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQE---DQKLQVLLTQIES 164
GP H+ H L EA Y+ +L+ LE + R E+ED QE +K + ++E
Sbjct: 121 GPEHRTHRTAPLQEAAGSYQVKLQMALELM---RKELEDALTQEANVGKKTVIWKEKVEM 177
Query: 165 KKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELE 224
++ + FE+ + L Q+ L RL E+ + E +++ ++ L EL+
Sbjct: 178 QRQRFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKELADELQ 237
Query: 225 EKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSEN 284
E+CQ+PA LL+ VR SR + T + E I +L R+ E++R F
Sbjct: 238 ERCQRPALGLLEGVRGVLSRSKAVTRLEAENIPMELKTACCIPGRR-----ELLRKF--- 289
Query: 285 LAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGF 344
++D + LDP TA SL+L+ D +SV+ + +P++P RFD P +LG F
Sbjct: 290 -----QVD---VKLDPATAHPSLLLTADLRSVQDGEPWRDVPNNPERFDTWPCILGLQSF 341
Query: 345 SSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAV-IISHQQCWASTSPG 403
SSGRH W+V +G+G +GV + + RKGE S E+GVWA+ ++ + SP
Sbjct: 342 SSGRHYWEV--LVGEGAEWGLGVCQDTLPRKGETTPSPENGVWALWLLKGNEYMVLASPS 399
Query: 404 TDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAV 454
L E PR + + LDYEAG+++ +N I+TF FSG + P+F +
Sbjct: 400 VPLLQLESPRCIGIFLDYEAGEISFYNVTDGSYIYTFNQLFSGLLRPYFFI 450
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 204 bits (519), Expect = 1e-52
Identities = 144/479 (30%), Positives = 235/479 (49%), Gaps = 58/479 (12%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
M + L ++ E C +C P + V+I CGH+FC+ C+ + + G +CP+C
Sbjct: 1 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGS------VCPVC 54
Query: 61 QEEEQAETPMAPVPL----------------GPLGETYCEEHGEKIYFFCENDAEFLCVF 104
++ + L G GE C HGE+++ FCE D + LC
Sbjct: 55 RQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGER-CAVHGERLHLFCEKDGKALCWV 113
Query: 105 CREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIES 164
C + H+ H + L+EA Q Y+++L+ L L +++ E + ++++ + + +
Sbjct: 114 CAQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKL------EVEIAIKRADW 167
Query: 165 KKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQ----- 219
KK VET R+ E QQ+ L+ + Q++ K+ E + + E+ +L Q
Sbjct: 168 KK-TVETQKSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQ 226
Query: 220 --VKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEM 277
+ EL+ +C A ELLQ+V + R E + SP+L R + +P +
Sbjct: 227 ELISELDRRCHSSALELLQEVIIVLERSESWNLKDLDITSPEL--------RSVCHVPGL 278
Query: 278 MRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPA 337
+M H ITLDP TA+ L+LSEDR+ VR ++S+P + RFD P
Sbjct: 279 KKMLRTCAVH--------ITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPM 330
Query: 338 VLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCW 397
VLG F SG+H W+VD+ + +GV + VRRKG LS++ G W + + ++Q +
Sbjct: 331 VLGAQHFHSGKHYWEVDVTGKE--AWDLGVCRDSVRRKGHFLLSSKSGFWTIWLWNKQKY 388
Query: 398 -ASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQ-EPIFTFT-ASFSGKVFPFFA 453
A T P T L L P V + LDYEAG V+ +N I++F+ +F+G + PFF+
Sbjct: 389 EAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFFS 447
>gi|4557743 Mediterranean fever protein [Homo sapiens]
Length = 781
Score = 201 bits (512), Expect = 9e-52
Identities = 137/425 (32%), Positives = 219/425 (51%), Gaps = 31/425 (7%)
Query: 47 GAQSSGKILLCPLCQEEEQAETP--MAPVPLGPLGETYCEEHGEKIYF-FCENDAEFLCV 103
G++S G CP CQ+ + ++P ++P PL C+ H +++ FCE+ E +C+
Sbjct: 346 GSRSPG----CPRCQDSHERKSPGSLSPQPL-----PQCKRHLKQVQLLFCEDHDEPICL 396
Query: 104 FCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIE 163
C HQ H V ++E ++ +++ +LE L R E+ + ++K L Q E
Sbjct: 397 ICSLSQEHQGHRVRPIEEVALEHKKKIQKQLEHLKKLRKSGEEQRSYGEEKAVSFLKQTE 456
Query: 164 SKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKEL 223
+ K +V+ E++ LEQQ +A L ++ Q + + R Y T+VS+++ L A + EL
Sbjct: 457 ALKQRVQRKLEQVYYFLEQQEHFFVASLEDVGQMVGQIRKAYDTRVSQDIALLDALIGEL 516
Query: 224 EEKCQQPASELLQDVRVNQSRCEMKTFVSPE--AISPDLVKKIRDFHRKILTLPEMMRMF 281
E K Q ELLQD+ R KT PE ++ +KI+ H+K + + + F
Sbjct: 517 EAKECQSEWELLQDIGDILHRA--KTVPVPEKWTTPQEIKQKIQLLHQKSEFVEKSTKYF 574
Query: 282 SENLAHHLEI-----------DSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPL 330
SE L +E+ + + LD +TA +L+ S+D KSVR + + LPD P
Sbjct: 575 SETLRSEMEMFNVPELIGAQAHAVNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQ 634
Query: 331 RFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVI 390
RFD VLG P F SGR W+V ++GD +G + RKG M LS E+G W VI
Sbjct: 635 RFDSCIIVLGSPSFLSGRRYWEV--EVGDKTAWILGACKTSISRKGNMTLSPENGYWVVI 692
Query: 391 -ISHQQCWASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTF-TASFSGKV 448
+ + AS+ P T L + E P+ V + +DY G ++ +N + I+TF + SFSG +
Sbjct: 693 MMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPL 752
Query: 449 FPFFA 453
P F+
Sbjct: 753 QPIFS 757
>gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]
Length = 630
Score = 199 bits (506), Expect = 4e-51
Identities = 134/411 (32%), Positives = 208/411 (50%), Gaps = 39/411 (9%)
Query: 83 CEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERD 142
C +H E + FCE D E +CV CRE +H+ H+V L+E +Q Y+ +L+ +E L +
Sbjct: 227 CPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLE 286
Query: 143 EIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKER 202
++ +K +E++++ L +Q++S+ V + F RL + L +++ L RLRE+ +
Sbjct: 287 AVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRA 346
Query: 203 DEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVK 262
++++E+ +L + E +E+ QQ LLQD++ +RCE PE SPD +
Sbjct: 347 GAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQ 406
Query: 263 KIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQK 322
H ++R S +D +TLDP TA +L+LS DR+ VR ++
Sbjct: 407 P----HSHDFLTDAIVRKMSRMFCQAARVD---LTLDPDTAHPALMLSPDRRGVRLAERR 459
Query: 323 KSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRK---GEMG 379
+ + D P RF VLG GF SGRH W+V++ G G VG A E K G G
Sbjct: 460 QEVADHPKRFSADCCVLGAQGFRSGRHYWEVEV--GGRRGWAVGAARESTHHKEKVGPGG 517
Query: 380 LSAEDG-------------------------VWAVIISHQQCWA-STSPGTDLPLSEIPR 413
S G VW V + ++ A S++ T L SE PR
Sbjct: 518 SSVGSGDASSSRHHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPR 577
Query: 414 GVRVALDYEAGQVTLHNAQTQEPIFTFTASFSG-KVFPFFAVWKKGSCLTL 463
V LDYEAG++ +NA+T + TF+A+F G +VFPFF V KG+ + L
Sbjct: 578 RFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKL 628
Score = 38.1 bits (87), Expect = 0.017
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 4 TPS-LKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPAL 43
TP+ ++ + E C +C D V+I CGH FCR+C+ L
Sbjct: 7 TPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQL 47
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 195 bits (495), Expect = 8e-50
Identities = 140/487 (28%), Positives = 229/487 (47%), Gaps = 58/487 (11%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
M T ++ + E AC +C L + ++I CGH+FC CL L ++ +S CPLC
Sbjct: 1 MDPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC 60
Query: 61 QEEEQAETPMAPVPLGP---------------------LGETYCEEHGEKIYFFCENDAE 99
+ P+ P L P L CE HGEK+ FC+ D
Sbjct: 61 R------APVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVL 114
Query: 100 FLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLL 159
+C C + P H+AH+V +++ Y+ L LE L E++E ++ E ++
Sbjct: 115 IMCEACSQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWK 174
Query: 160 TQIESKKHQVETAFERLQQELEQQR----------CLLLARLRELEQQIWKERDEYITKV 209
Q+E++K + FE+ Q+ LE+++ LA L+ + ++ + +++
Sbjct: 175 IQVETRKQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSEL 234
Query: 210 SEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHR 269
++ L + EL+E+ Q+P +LQD++ +R + + PE IS +L R
Sbjct: 235 IQQSQVLWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPEPISLELKTDCR---- 290
Query: 270 KILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSP 329
+L L E+++ ++ + + LDP TA L++SEDRK V Y + LPD+P
Sbjct: 291 -VLGLREILKTYAAD-----------VRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNP 338
Query: 330 LRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAV 389
RF VLG SSGRH W+V ++GD +GV + V RK + LS G W +
Sbjct: 339 ERFYRYNIVLGSQCISSGRHYWEV--EVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVI 396
Query: 390 -IISHQQCWASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHN-AQTQEPIFTFTA-SFSG 446
+ + A T L L PR V + +DYEA ++ +N IFTF F G
Sbjct: 397 RLRKGNEYRAGTDEYPILSLPVPPRRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPG 456
Query: 447 KVFPFFA 453
++ P+F+
Sbjct: 457 RLLPYFS 463
>gi|44680130 tripartite motif-containing 7 isoform 2 [Homo sapiens]
Length = 329
Score = 185 bits (470), Expect = 7e-47
Identities = 113/314 (35%), Positives = 176/314 (56%), Gaps = 8/314 (2%)
Query: 155 LQVLLT---QIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSE 211
LQ+LL Q+ +++ +V F+ L+ L +Q LL RL EL +++ ++++E + ++
Sbjct: 17 LQLLLLGQKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGV 76
Query: 212 EVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKI 271
E+T+L +++E Q+P + LQ+ + SRC P +S ++ K+ + K
Sbjct: 77 EITQLSKLSSQIQETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNVSLKT 136
Query: 272 LTLPEMMRMFSENLAHHLEIDSGV-ITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPL 330
L M++ F E+L LE + V +TLDP TA+ L+LS D K VR + + LP+ P
Sbjct: 137 FVLKGMLKKFKEDLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPC 196
Query: 331 RFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVI 390
RFD VL GFSSGRH W+V ++G G GVA E VRRKG + E+GVWA+
Sbjct: 197 RFDTNTRVLASCGFSSGRHHWEV--EVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQ 254
Query: 391 ISHQQCWASTSP-GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVF 449
++ Q WA TSP + L + R VRVALD E G V+ + + ++TF +F +VF
Sbjct: 255 LNGGQYWAVTSPERSPLSCGHLSR-VRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVF 313
Query: 450 PFFAVWKKGSCLTL 463
P F+V G+ L +
Sbjct: 314 PLFSVCSTGTYLRI 327
>gi|44680128 tripartite motif-containing 7 isoform 3 [Homo sapiens]
Length = 303
Score = 182 bits (462), Expect = 6e-46
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 164 SKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKEL 223
+++ +V F+ L+ L +Q LL RL EL +++ ++++E + ++ E+T+L ++
Sbjct: 3 AEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEITQLSKLSSQI 62
Query: 224 EEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSE 283
+E Q+P + LQ+ + SRC P +S ++ K+ + K L M++ F E
Sbjct: 63 QETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGMLKKFKE 122
Query: 284 NLAHHLEIDSGV-ITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFP 342
+L LE + V +TLDP TA+ L+LS D K VR + + LP+ P RFD VL
Sbjct: 123 DLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPCRFDTNTRVLASC 182
Query: 343 GFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSP 402
GFSSGRH W+V ++G G GVA E VRRKG + E+GVWA+ ++ Q WA TSP
Sbjct: 183 GFSSGRHHWEV--EVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQLNGGQYWAVTSP 240
Query: 403 -GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCL 461
+ L + R VRVALD E G V+ + + ++TF +F +VFP F+V G+ L
Sbjct: 241 ERSPLSCGHLSR-VRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYL 299
Query: 462 TL 463
+
Sbjct: 300 RI 301
>gi|44680126 tripartite motif-containing 7 isoform 3 [Homo sapiens]
Length = 303
Score = 182 bits (462), Expect = 6e-46
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 164 SKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKEL 223
+++ +V F+ L+ L +Q LL RL EL +++ ++++E + ++ E+T+L ++
Sbjct: 3 AEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEITQLSKLSSQI 62
Query: 224 EEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSE 283
+E Q+P + LQ+ + SRC P +S ++ K+ + K L M++ F E
Sbjct: 63 QETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGMLKKFKE 122
Query: 284 NLAHHLEIDSGV-ITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFP 342
+L LE + V +TLDP TA+ L+LS D K VR + + LP+ P RFD VL
Sbjct: 123 DLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPCRFDTNTRVLASC 182
Query: 343 GFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSP 402
GFSSGRH W+V ++G G GVA E VRRKG + E+GVWA+ ++ Q WA TSP
Sbjct: 183 GFSSGRHHWEV--EVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQLNGGQYWAVTSP 240
Query: 403 -GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCL 461
+ L + R VRVALD E G V+ + + ++TF +F +VFP F+V G+ L
Sbjct: 241 ERSPLSCGHLSR-VRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYL 299
Query: 462 TL 463
+
Sbjct: 300 RI 301
>gi|44680124 tripartite motif-containing 7 isoform 3 [Homo sapiens]
Length = 303
Score = 182 bits (462), Expect = 6e-46
Identities = 108/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 164 SKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKEL 223
+++ +V F+ L+ L +Q LL RL EL +++ ++++E + ++ E+T+L ++
Sbjct: 3 AEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQLGVEITQLSKLSSQI 62
Query: 224 EEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSE 283
+E Q+P + LQ+ + SRC P +S ++ K+ + K L M++ F E
Sbjct: 63 QETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTVSSEMKNKVWNVSLKTFVLKGMLKKFKE 122
Query: 284 NLAHHLEIDSGV-ITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFP 342
+L LE + V +TLDP TA+ L+LS D K VR + + LP+ P RFD VL
Sbjct: 123 DLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPCRFDTNTRVLASC 182
Query: 343 GFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSP 402
GFSSGRH W+V ++G G GVA E VRRKG + E+GVWA+ ++ Q WA TSP
Sbjct: 183 GFSSGRHHWEV--EVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQLNGGQYWAVTSP 240
Query: 403 -GTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCL 461
+ L + R VRVALD E G V+ + + ++TF +F +VFP F+V G+ L
Sbjct: 241 ERSPLSCGHLSR-VRVALDLEVGAVSFYAVEDMRHLYTFRVNFQERVFPLFSVCSTGTYL 299
Query: 462 TL 463
+
Sbjct: 300 RI 301
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 173 bits (439), Expect = 3e-43
Identities = 129/471 (27%), Positives = 221/471 (46%), Gaps = 38/471 (8%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLC 60
M +L + E +C +C L+D VTI CGH FCR CL + + CP+C
Sbjct: 1 MEFVTALVNLQEESSCPICLEYLKDPVTINCGHNFCRSCL----SVSWKDLDDTFPCPVC 56
Query: 61 QEEEQAETPMAPVPLGPLGE------------------TYCEEHGEKIYFFCENDAEFLC 102
+ ++ L L E CE+H + + FC D E LC
Sbjct: 57 RFCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILC 116
Query: 103 VFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQI 162
C HQ H + + +A +R+ L LE L + +E V + K L ++
Sbjct: 117 TQCSFSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKV 176
Query: 163 ESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKE 222
E K+ ++ + FE+++ L+ ++ ++L ++++ E I + +E + ++S+ V+ L ++E
Sbjct: 177 EYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLRE 236
Query: 223 LEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFS 282
+E K Q ELL + + + PE S L K + L +++ F
Sbjct: 237 VEGKSVQSNLELL--TQAKSMHHKYQNLKCPELFSFRLTKYGFSLPPQYSGLDRIIKPF- 293
Query: 283 ENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFP 342
++D + LD TA L++SEDRK+VRY R+K+++ P RF PAVLG
Sbjct: 294 -------QVD---VILDLNTAHPQLLVSEDRKAVRYERKKRNICYDPRRFYVCPAVLGSQ 343
Query: 343 GFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSP 402
FSSGRH W+V ++G+ +GV + + R + S G WA+ + + ++ P
Sbjct: 344 RFSSGRHYWEV--EVGNKPKWILGVCQDCLLRNWQDQPSVLGGFWAIGRYMKSGYVASGP 401
Query: 403 GTDLPLSEI-PRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFF 452
T L + P + + LDYE G ++ +N + ++TF F+ V+P+F
Sbjct: 402 KTTQLLPVVKPSKIGIFLDYELGDLSFYNMNDRSILYTFNDCFTEAVWPYF 452
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 172 bits (437), Expect = 4e-43
Identities = 132/481 (27%), Positives = 215/481 (44%), Gaps = 43/481 (8%)
Query: 4 TPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEE 63
+P L + E C +C L + ++I CGH+FC+ C+ + CP+CQ
Sbjct: 3 SPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTS 62
Query: 64 EQAET------------PMAPVPLGP---LGETYCEEHGEKIYFFCENDAEFLCVFCREG 108
Q + V LGP L C +HGEK+ FC+ D + +C C
Sbjct: 63 YQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERS 122
Query: 109 PTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQ 168
H+ H ++E Q Y+++ + L+ L E E E + +K Q+E ++ +
Sbjct: 123 QEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCR 182
Query: 169 VETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQ 228
++T F +L+ L++ L +L + E++ + +E + + L + +LE +CQ
Sbjct: 183 IQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQ 242
Query: 229 QPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHH 288
ELLQDV R E T PEA+ L R + P++ RM +
Sbjct: 243 GSTMELLQDVSDVTERSEFWTLRKPEALPTKL--------RSMFRAPDLKRML--RVCRE 292
Query: 289 L-EIDS--GVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFS 345
L ++ S +TL+P TA+ +LVL+++R+ VR+ K S P S L +VLG FS
Sbjct: 293 LTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGP-SCLEKHYDCSVLGSQHFS 351
Query: 346 SGRHRWQVDLQ---------LGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQ-- 394
SG+H W+VD+ + G T + G W + + H
Sbjct: 352 SGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHE 411
Query: 395 -QCWASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQE-PIFTFTA-SFSGKVFPF 451
+ + +SP L ++ PR V V LDYEAG V+ +N PI+TF+ F + P+
Sbjct: 412 YRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPY 471
Query: 452 F 452
F
Sbjct: 472 F 472
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 172 bits (437), Expect = 4e-43
Identities = 132/481 (27%), Positives = 215/481 (44%), Gaps = 43/481 (8%)
Query: 4 TPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEE 63
+P L + E C +C L + ++I CGH+FC+ C+ + CP+CQ
Sbjct: 31 SPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTS 90
Query: 64 EQAET------------PMAPVPLGP---LGETYCEEHGEKIYFFCENDAEFLCVFCREG 108
Q + V LGP L C +HGEK+ FC+ D + +C C
Sbjct: 91 YQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERS 150
Query: 109 PTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQ 168
H+ H ++E Q Y+++ + L+ L E E E + +K Q+E ++ +
Sbjct: 151 QEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCR 210
Query: 169 VETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQ 228
++T F +L+ L++ L +L + E++ + +E + + L + +LE +CQ
Sbjct: 211 IQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQ 270
Query: 229 QPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHH 288
ELLQDV R E T PEA+ L R + P++ RM +
Sbjct: 271 GSTMELLQDVSDVTERSEFWTLRKPEALPTKL--------RSMFRAPDLKRML--RVCRE 320
Query: 289 L-EIDS--GVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFS 345
L ++ S +TL+P TA+ +LVL+++R+ VR+ K S P S L +VLG FS
Sbjct: 321 LTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGP-SCLEKHYDCSVLGSQHFS 379
Query: 346 SGRHRWQVDLQ---------LGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQ-- 394
SG+H W+VD+ + G T + G W + + H
Sbjct: 380 SGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHE 439
Query: 395 -QCWASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQE-PIFTFTA-SFSGKVFPF 451
+ + +SP L ++ PR V V LDYEAG V+ +N PI+TF+ F + P+
Sbjct: 440 YRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPY 499
Query: 452 F 452
F
Sbjct: 500 F 500
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 161 bits (408), Expect = 1e-39
Identities = 126/480 (26%), Positives = 211/480 (43%), Gaps = 48/480 (10%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLP-----ALSQMGAQSSGKIL 55
M A + + E C++C D V CGH FCR C+ A + G +
Sbjct: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
Query: 56 LCPLCQEEEQAET-----------PMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVF 104
CP C+E MA G + C+EH E + FC+ D +CV
Sbjct: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
Query: 105 CREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIES 164
CRE H+ H V +EA+Q Y+ +L +E L + +++ +E+Q L +++
Sbjct: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
Query: 165 KKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELE 224
++ ++ FE++ L ++ LL L E++ E + + + L + +LE
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
Query: 225 EKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSEN 284
E+ Q ++LQD++ SR + PE P + + +I E++R F E+
Sbjct: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQI----EVLRGFLED 296
Query: 285 LAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPL--------RFDGLP 336
+ D +A L+L E +RQ++ L SP RF P
Sbjct: 297 -----------VVPDATSAYPYLLLYE-------SRQRRYLGSSPEGSGFCSKDRFVAYP 338
Query: 337 AVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQC 396
+G FSSGRH W+V + + +GV + V RK + E+G W V +S
Sbjct: 339 CAVGQTAFSSGRHYWEVGMNITGDALWALGVCRDNVSRKDRVPKCPENGFWVVQLSKGTK 398
Query: 397 WAST-SPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFT-ASFSGKVFPFFAV 454
+ ST S T + L E P + + LD+EAG+V+ ++ + T++ A+F G + PFF +
Sbjct: 399 YLSTFSALTPVMLMEPPSHMGIFLDFEAGEVSFYSVSDGSHLHTYSQATFPGPLQPFFCL 458
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 161 bits (408), Expect = 1e-39
Identities = 126/480 (26%), Positives = 211/480 (43%), Gaps = 48/480 (10%)
Query: 1 MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLP-----ALSQMGAQSSGKIL 55
M A + + E C++C D V CGH FCR C+ A + G +
Sbjct: 1 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 60
Query: 56 LCPLCQEEEQAET-----------PMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVF 104
CP C+E MA G + C+EH E + FC+ D +CV
Sbjct: 61 PCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVV 120
Query: 105 CREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIES 164
CRE H+ H V +EA+Q Y+ +L +E L + +++ +E+Q L +++
Sbjct: 121 CRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKE 180
Query: 165 KKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELE 224
++ ++ FE++ L ++ LL L E++ E + + + L + +LE
Sbjct: 181 RRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLE 240
Query: 225 EKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSEN 284
E+ Q ++LQD++ SR + PE P + + +I E++R F E+
Sbjct: 241 ERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQI----EVLRGFLED 296
Query: 285 LAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPL--------RFDGLP 336
+ D +A L+L E +RQ++ L SP RF P
Sbjct: 297 -----------VVPDATSAYPYLLLYE-------SRQRRYLGSSPEGSGFCSKDRFVAYP 338
Query: 337 AVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQC 396
+G FSSGRH W+V + + +GV + V RK + E+G W V +S
Sbjct: 339 CAVGQTAFSSGRHYWEVGMNITGDALWALGVCRDNVSRKDRVPKCPENGFWVVQLSKGTK 398
Query: 397 WAST-SPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFT-ASFSGKVFPFFAV 454
+ ST S T + L E P + + LD+EAG+V+ ++ + T++ A+F G + PFF +
Sbjct: 399 YLSTFSALTPVMLMEPPSHMGIFLDFEAGEVSFYSVSDGSHLHTYSQATFPGPLQPFFCL 458
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 161 bits (407), Expect = 1e-39
Identities = 133/471 (28%), Positives = 220/471 (46%), Gaps = 40/471 (8%)
Query: 5 PSLKVVHELPA---CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCP--- 58
PS V+ ++ C LC D + + CGH FC C+ ++ A+ + CP
Sbjct: 27 PSKVVIQDITMELHCPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKET----FCPECK 82
Query: 59 -LCQEEEQAETPMAP-----VPLGPL--GETYCEEHGEKIYFFCENDAEFLCVFCREGPT 110
LCQ P+ + PL G C EHGE + F + D + +C C++
Sbjct: 83 MLCQYNNCTFNPVLDKLVEKIKKLPLLKGHPQCPEHGENLKLFSKPDGKLICFQCKDARL 142
Query: 111 HQAHTVGFLD--EAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKH- 167
+ FL +A+ + + L + L T E++ ++ + + + + E+K H
Sbjct: 143 SVGQSKEFLQISDAVHFFTEELAIQQGQLETTLKELQTLR---NMQKEAIAAHKENKLHL 199
Query: 168 --QVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEE 225
V F +L Q L + +L LRE + + +E + ++++ E+ + ++
Sbjct: 200 QQHVSMEFLKLHQFLHSKEKDILTELREEGKALNEEMELNLSQLQEQCLLAKDMLVSIQA 259
Query: 226 KCQQPAS-ELLQDVRVNQSRCE--MKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFS 282
K +Q S + L+D+ E MK + E IS L + + I + + R
Sbjct: 260 KTEQQNSFDFLKDITTLLHSLEQGMKVLATRELISRKL--NLGQYKGPIQYM--VWREMQ 315
Query: 283 ENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFP 342
+ L L +TLDP+TA +LVLS+ + SV + KK +PD P RFD AVLG
Sbjct: 316 DTLCPGLS----PLTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSR 371
Query: 343 GFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQ-QCWASTS 401
GF+SG+ W+V ++ TVGV E + RKG L+ E G W + + +Q A
Sbjct: 372 GFTSGKWYWEV--EVAKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDL 429
Query: 402 PGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFF 452
P L L+ V + LDYE GQ++ +NA+T I+TF+ +F K++P+F
Sbjct: 430 PSFSLTLTNNLDKVGIYLDYEGGQLSFYNAKTMTHIYTFSNTFMEKLYPYF 480
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 157 bits (397), Expect = 2e-38
Identities = 134/481 (27%), Positives = 209/481 (43%), Gaps = 67/481 (13%)
Query: 10 VHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETP 69
+ E C +C +D V+I CGH FCR CL G G CP C+ P
Sbjct: 6 IQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPG----GGPFPCPECRHPS---AP 58
Query: 70 MAPVP---------------LGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAH 114
A P LGP+ C H E + FCE+D +C+ CRE HQ H
Sbjct: 59 AALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTH 118
Query: 115 TVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFE 174
+ +DEA + YR++L L + ++ ++ E + +I+S++ ++ T F
Sbjct: 119 AMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFS 178
Query: 175 RLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASEL 234
+L L ++ L L RL + E++ K+ +E K+++ + L + E+ EK Q P EL
Sbjct: 179 KLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPTLEL 238
Query: 235 LQDVRVNQSRCEMKTF-VSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDS 293
LQ+ + +R E++ S EA+ V +I + EM++ F
Sbjct: 239 LQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIP-------LMKEMLKRFQV---------- 281
Query: 294 GVITLDPQTASRSLVLSEDRKSVRYTRQKKSLP------------DSPL------RFDGL 335
+ L TA LV S++ + V+ T S P +P RF L
Sbjct: 282 -AVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHL 340
Query: 336 PAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGE---GVRRKGEMGLSAEDGVWAVIIS 392
P VLG F+SG+H W+V+ + D VGV E G+ + +M S + G+WA+ S
Sbjct: 341 PCVLGKNVFTSGKHYWEVESR--DSLEVAVGVCREDVMGITDRSKM--SPDVGIWAIYWS 396
Query: 393 HQQCWASTS-PGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPF 451
W PGT V V LD G V+ ++A + TF+ S ++ PF
Sbjct: 397 AAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPF 456
Query: 452 F 452
F
Sbjct: 457 F 457
>gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]
Length = 518
Score = 154 bits (390), Expect = 1e-37
Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 7/270 (2%)
Query: 83 CEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERD 142
C +H E + FCE D E +CV CRE +H+ H+V L+E +Q Y+ +L+ +E L +
Sbjct: 227 CPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLE 286
Query: 143 EIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKER 202
++ +K +E++++ L +Q++S+ V + F RL + L +++ L RLRE+ +
Sbjct: 287 AVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRA 346
Query: 203 DEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVK 262
++++E+ +L + E +E+ QQ LLQD++ +RCE PE SPD +
Sbjct: 347 GAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQ 406
Query: 263 KIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQK 322
H ++R S +D +TLDP TA +L+LS DR+ VR ++
Sbjct: 407 P----HSHDFLTDAIVRKMSRMFCQAARVD---LTLDPDTAHPALMLSPDRRGVRLAERR 459
Query: 323 KSLPDSPLRFDGLPAVLGFPGFSSGRHRWQ 352
+ + D P RF VLG GF SGRH W+
Sbjct: 460 QEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
Score = 38.1 bits (87), Expect = 0.017
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 4 TPS-LKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPAL 43
TP+ ++ + E C +C D V+I CGH FCR+C+ L
Sbjct: 7 TPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQL 47
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 152 bits (383), Expect = 8e-37
Identities = 126/466 (27%), Positives = 214/466 (45%), Gaps = 50/466 (10%)
Query: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAP-VP 74
C++C +D V++ C H FCR C+ Q + CP C+ AE +AP +
Sbjct: 11 CSICLSIYQDPVSLGCEHYFCRRCIT--EHWVRQEAQGARDCPECRRTF-AEPALAPSLK 67
Query: 75 LGPLGETY-----------------CEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVG 117
L + E Y C+ H +K+ FC D LC FC E H+ H V
Sbjct: 68 LANIVERYSSFPLDAILNARRAARPCQAH-DKVKLFCLTDRALLCFFCDEPALHEQHQVT 126
Query: 118 FLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQ 177
+D+A + L+ +L+AL +D + + + LQ+L Q+ K ++ +
Sbjct: 127 GIDDAFDELQRELKDQLQAL-------QDSEREHTEALQLLKRQLAETKSSTKSLRTTIG 179
Query: 178 QELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQD 237
+ E+ LL R + + +++ + +T + ++V R Q+++++E +++LQ+
Sbjct: 180 EAFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQE-----GAQILQE 234
Query: 238 VRVNQSRCEMKTFVSPEA-ISPDLVKKI-------RDFHRKILTLPEMMRMFSENLAHHL 289
+ + TF++ A +S L KI DF T P ++ ++L +
Sbjct: 235 ---RLAETDRHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIW-KSLFQDI 290
Query: 290 EIDSGVITLDPQTASRSLVLSEDRKSVRY-TRQKKSLPDSPLRFDGLPAVLGFPGFSSGR 348
+TLDP TA + L+LS+D V Y + L DSP RFD +VLG FSSG
Sbjct: 291 HPVPAALTLDPGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSSGV 350
Query: 349 HRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVII-SHQQCWASTSPGTDLP 407
H W+V + + +G+A E RKG + + G + +++ Q A T P T L
Sbjct: 351 HYWEV--VVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLN 408
Query: 408 LSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFA 453
+ + V V LDY+ G + +NA ++TF F GK+ +F+
Sbjct: 409 VRDKLDKVGVFLDYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFS 454
>gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]
Length = 450
Score = 151 bits (381), Expect = 1e-36
Identities = 119/450 (26%), Positives = 200/450 (44%), Gaps = 48/450 (10%)
Query: 31 CGHTFCRLCLP-----ALSQMGAQSSGKILLCPLCQEEEQAET-----------PMAPVP 74
CGH FCR C+ A + G + CP C+E MA
Sbjct: 4 CGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMAQQH 63
Query: 75 LGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRL 134
G + C+EH E + FC+ D +CV CRE H+ H V +EA+Q Y+ +L +
Sbjct: 64 PGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDM 123
Query: 135 EALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLARLREL 194
E L + +++ +E+Q L +++ ++ ++ FE++ L ++ LL L
Sbjct: 124 EYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETE 183
Query: 195 EQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPE 254
E++ E + + + L + +LEE+ Q ++LQD++ SR + PE
Sbjct: 184 EEETASRLRESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPE 243
Query: 255 AISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRK 314
P + + +I E++R F E+ + D +A L+L E
Sbjct: 244 VAPPTRPRTVCRVPGQI----EVLRGFLED-----------VVPDATSAYPYLLLYE--- 285
Query: 315 SVRYTRQKKSLPDSPL--------RFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVG 366
+RQ++ L SP RF P +G FSSGRH W+V + + +G
Sbjct: 286 ----SRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQTAFSSGRHYWEVGMNITGDALWALG 341
Query: 367 VAGEGVRRKGEMGLSAEDGVWAVIISHQQCWAST-SPGTDLPLSEIPRGVRVALDYEAGQ 425
V + V RK + E+G W V +S + ST S T + L E P + + LD+EAG+
Sbjct: 342 VCRDNVSRKDRVPKCPENGFWVVQLSKGTKYLSTFSALTPVMLMEPPSHMGIFLDFEAGE 401
Query: 426 VTLHNAQTQEPIFTFT-ASFSGKVFPFFAV 454
V+ ++ + T++ A+F G + PFF +
Sbjct: 402 VSFYSVSDGSHLHTYSQATFPGPLQPFFCL 431
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,440,501
Number of Sequences: 37866
Number of extensions: 941632
Number of successful extensions: 6532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 594
Number of HSP's that attempted gapping in prelim test: 4420
Number of HSP's gapped (non-prelim): 2034
length of query: 465
length of database: 18,247,518
effective HSP length: 106
effective length of query: 359
effective length of database: 14,233,722
effective search space: 5109906198
effective search space used: 5109906198
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.