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Search of human proteins with 148839382
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148839382 ring finger protein 169 [Homo sapiens]
(708 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148839382 ring finger protein 169 [Homo sapiens] 1405 0.0
gi|31377566 ring finger protein 168 [Homo sapiens] 99 1e-20
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 52 1e-06
gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens] 50 6e-06
gi|15208660 tripartite motif protein 21 [Homo sapiens] 50 9e-06
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 49 2e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 48 3e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 48 3e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 6e-05
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 46 1e-04
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 46 1e-04
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 45 2e-04
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 45 2e-04
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 45 3e-04
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 45 3e-04
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 45 3e-04
gi|30425428 deltex homolog 3 [Homo sapiens] 45 3e-04
gi|254028232 MAP/microtubule affinity-regulating kinase 2 isofor... 44 5e-04
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 44 5e-04
gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens] 44 7e-04
gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens] 44 7e-04
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 43 9e-04
gi|147902746 MEX3A protein [Homo sapiens] 42 0.002
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 42 0.002
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 42 0.002
gi|254028237 MAP/microtubule affinity-regulating kinase 2 isofor... 42 0.003
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 42 0.003
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 42 0.003
>gi|148839382 ring finger protein 169 [Homo sapiens]
Length = 708
Score = 1405 bits (3637), Expect = 0.0
Identities = 708/708 (100%), Positives = 708/708 (100%)
Query: 1 MAAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLP 60
MAAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLP
Sbjct: 1 MAAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLP 60
Query: 61 PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD 120
PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD
Sbjct: 61 PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD 120
Query: 121 DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKP 180
DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKP
Sbjct: 121 DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKP 180
Query: 181 GELREEYESLRKLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLE 240
GELREEYESLRKLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLE
Sbjct: 181 GELREEYESLRKLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLE 240
Query: 241 RCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQER 300
RCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQER
Sbjct: 241 RCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQER 300
Query: 301 AKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLSSLASL 360
AKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLSSLASL
Sbjct: 301 AKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLSSLASL 360
Query: 361 HKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQK 420
HKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQK
Sbjct: 361 HKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQK 420
Query: 421 QTSYEASPRILKKWEQIFQERQIKKTLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAV 480
QTSYEASPRILKKWEQIFQERQIKKTLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAV
Sbjct: 421 QTSYEASPRILKKWEQIFQERQIKKTLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAV 480
Query: 481 NTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELKGGGSG 540
NTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELKGGGSG
Sbjct: 481 NTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELKGGGSG 540
Query: 541 TSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFD 600
TSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFD
Sbjct: 541 TSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFD 600
Query: 601 LTNGVLVESLSEEPLPSLRRGRKRHCKTKHLEQNGSLKKLRQTSGEVGLAPTDPVLREME 660
LTNGVLVESLSEEPLPSLRRGRKRHCKTKHLEQNGSLKKLRQTSGEVGLAPTDPVLREME
Sbjct: 601 LTNGVLVESLSEEPLPSLRRGRKRHCKTKHLEQNGSLKKLRQTSGEVGLAPTDPVLREME 660
Query: 661 QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSNMAGAK 708
QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSNMAGAK
Sbjct: 661 QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSNMAGAK 708
>gi|31377566 ring finger protein 168 [Homo sapiens]
Length = 571
Score = 99.4 bits (246), Expect = 1e-20
Identities = 111/429 (25%), Positives = 167/429 (38%), Gaps = 55/429 (12%)
Query: 61 PRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARD 120
P E C C+E E LPC H+LC+ C Q + A CP CR R W R R
Sbjct: 9 PSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRR 68
Query: 121 DGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKP 180
+ + E L ++ P C+ R G E E A +P + LSKP
Sbjct: 69 NSLVNVE-LWTIIQKHYPRECKLRASG--------QESEEVADDYQPVRL------LSKP 113
Query: 181 GELREEYES-----LRKLREEKLQEEKPSEDQIHKLLPEDTETGKRK-------MDEQKK 228
GELR EYE + R + +E K SE+ I +LL E+ E KR+ M+EQ K
Sbjct: 114 GELRREYEEEISKVAAERRASEEEENKASEEYIQRLLAEEEEEEKRQAEKRRRAMEEQLK 173
Query: 229 RDEPLVLKTNLE---RCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNS 285
DE L K +++ C +S S SR T +S SKN + + L
Sbjct: 174 SDEELARKLSIDINNFCEGSISASPLN--SRKSDPVTPKSEKKSKNKQRNTGDIQKYLTP 231
Query: 286 KVE-RSQSCSDTAQERAKSRV---------RAVPGNKAKVTTMTPASNPIIGVLLSTQNN 335
K + S S S+ QE K V ++ G ++ M P +P I + + Q
Sbjct: 232 KSQFGSASHSEAVQEVRKDSVSKDIDSSDRKSPTGQDTEIEDM-PTLSPQISLGVGEQ-- 288
Query: 336 RCVSAPDLTIEKRLPFSSLSSLASLHKPERSVSPESNDSISEELNHFKPIVCSPCT---- 391
D +IE +P+ H+ P ++ L+H +P P +
Sbjct: 289 ----GADSSIESPMPWLCACGAEWYHEGNVKTRPSNHGKELCVLSHERPKTRVPYSKETA 344
Query: 392 --PPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKKTLSK 449
P R G + + ++ N + +++ S I K+ Q +K
Sbjct: 345 VMPCGRTESGCAPTSGVTQTNGNNTGETENEESCLLISKEISKRKNQESSFEAVKDPCFS 404
Query: 450 ATLTSLAPE 458
A ++PE
Sbjct: 405 AKRRKVSPE 413
Score = 45.4 bits (106), Expect = 2e-04
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 661 QKLQQEEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSN 703
++ +QEE+DR LALQLQ+ D E+ +R+KGS D+Y LR+++
Sbjct: 438 ERHKQEEQDRLLALQLQKEVDKEQMVPNRQKGSPDEYHLRATS 480
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 52.4 bits (124), Expect = 1e-06
Identities = 79/333 (23%), Positives = 117/333 (35%), Gaps = 63/333 (18%)
Query: 40 GPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAA 99
GP +G L L+ L E+ C+ CLE E ++ CGHS CR C R +
Sbjct: 9 GPGTGAEALALAAEL--------QGEATCSICLELFREPVSVECGHSFCRACIGRCWERP 60
Query: 100 GPGCPRCRARGPGWARRRARDDGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQE 159
G G R P + +C ++P + RP R A A R
Sbjct: 61 GAGSVGAATRAPPFPL------------PCPQCREPARPSQLRPNRQLAAVATLLRRFSL 108
Query: 160 PRAAPAEPDFIFRA-------------PIKLSKPGE----------LREEYESLRKLREE 196
P AAP E A P KL + RE E +E
Sbjct: 109 PAAAPGEHGSQAAAARAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDE 168
Query: 197 KLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVL-------KTNLERCPARLSDS 249
+QE K + ++L ++ E + +KK + L+ K E R
Sbjct: 169 AVQEAKELLESRLRVLKKELEDCEVFRSTEKKESKELLKQMAAEQEKVGAEFQALRAFLV 228
Query: 250 ENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQ----------E 299
E E G++ + R V++ + +LA L ++ + S +TAQ +
Sbjct: 229 EQEGRLLGRLEELSRE--VAQKQNENLAQLGVEITQLSKLSSQIQETAQKPDLDFLQEFK 286
Query: 300 RAKSRVRAVPGNKAKVTTMTPASNPIIGVLLST 332
SR VPG K T + N + V L T
Sbjct: 287 STLSRCSNVPGPK-PTTVSSEMKNKVWNVSLKT 318
>gi|16076875 tripartite motif-containing 7 isoform 4 [Homo sapiens]
Length = 221
Score = 50.4 bits (119), Expect = 6e-06
Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 20/127 (15%)
Query: 40 GPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAA 99
GP +G L L+ L E+ C+ CLE E ++ CGHS CR C R +
Sbjct: 9 GPGTGAEALALAAEL--------QGEATCSICLELFREPVSVECGHSFCRACIGRCWERP 60
Query: 100 GPGCPRCRARGPGWARRRARDDGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQE 159
G G R P + +C ++P + RP R A A R
Sbjct: 61 GAGSVGAATRAPPFPL------------PCPQCREPARPSQLRPNRQLAAVATLLRRFSL 108
Query: 160 PRAAPAE 166
P AAP E
Sbjct: 109 PAAAPGE 115
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 49.7 bits (117), Expect = 9e-06
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 37/282 (13%)
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARDDGQ 123
EE C CL+P E ++ CGHS C+ C + G CP CR R + + R + Q
Sbjct: 12 EEVTCPICLDPFVEPVSIECGHSFCQECISQVGKGGGSVCPVCRQR---FLLKNLRPNRQ 68
Query: 124 ADS------EVLGECARRSQPERCRP---------RRDGGA---AAAGPRPEQEPRAAPA 165
+ E+ E +Q ERC +DG A A R ++ P
Sbjct: 69 LANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVCAQSRKHRDHAMVPL 128
Query: 166 E---PDFIFRAPIKLSKPGELREEYESLRKLREE----KLQEEKPSEDQIHKLLPEDTET 218
E ++ + + L GELR + E KL E + +K E Q ++ E +
Sbjct: 129 EEAAQEYQEKLQVAL---GELRRKQELAEKLEVEIAIKRADWKKTVETQKSRIHAEFVQQ 185
Query: 219 GKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAF 278
K + E+++R + K E+ L + E + + Q Q S + +S +L
Sbjct: 186 -KNFLVEEEQRQLQELEKDEREQLRI-LGEKEAKLAQQSQALQELISELDRRCHSSALEL 243
Query: 279 LAGKLNSKVERSQSCSDTAQERAKSRVRA---VPGNKAKVTT 317
L ++ +ERS+S + + +R+ VPG K + T
Sbjct: 244 LQ-EVIIVLERSESWNLKDLDITSPELRSVCHVPGLKKMLRT 284
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 51 SPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADA-AGPGCPRCRAR 109
SP + P EE CA C +P +A L CGH+ CRGC R + P CP C+ R
Sbjct: 4 SPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 48.1 bits (113), Expect = 3e-05
Identities = 67/212 (31%), Positives = 73/212 (34%), Gaps = 48/212 (22%)
Query: 2 AAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPP 61
AA S RA AA A S+ RR R A GAPG P V +PP PP PP
Sbjct: 24 AALAISGRADEEGAAGAGSKLWRRPR----GAVSAGAPG---SPLYRVSAPPPAPPPPPP 76
Query: 62 --------RPEESGCAGCLEPPG--------EAAALPCGHSLCRGCAQRAADAAGPG--- 102
RP G PG A G C A AA GP
Sbjct: 77 PGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQ 136
Query: 103 -CPRCRARGPGWAR-RRARDDGQADSEVLG----ECARRSQPERCRPRRDGGAAAAGPRP 156
P R PG A RA G+ SE G ECARR P G A+G
Sbjct: 137 VPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRV------PLHHGPPGASGVGS 190
Query: 157 E--------QEPRAAPAEPDF--IFRAPIKLS 178
E Q P P P + R P+ LS
Sbjct: 191 ERDRKFQLHQTPARGPPFPGISGMTRGPVVLS 222
Score = 45.4 bits (106), Expect = 2e-04
Identities = 53/168 (31%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 4 AGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRP 63
AG + R +AAA + ++RG R A +T +PGPA SPP P P
Sbjct: 111 AGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPA--------SPPRASPGGRPGS 162
Query: 64 EESGCAG--CLE-------PPGEAAALPCGHSLCRGCAQRAADAAGPGCPRC--RARGP- 111
E G +G C PPG + G R A GP P RGP
Sbjct: 163 EARGRSGAECARRVPLHHGPPGASGV---GSERDRKFQLHQTPARGPPFPGISGMTRGPV 219
Query: 112 ---GWARRRARDDGQADSEVLGECARRSQPERC--RPRRDGGAAAAGP 154
G R+ G + S LGE A +P R RPR G A GP
Sbjct: 220 VLSGVNRQHRWPPGASPSRSLGE-AGGERPARALRRPRAPGRAGGGGP 266
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 48.1 bits (113), Expect = 3e-05
Identities = 67/212 (31%), Positives = 73/212 (34%), Gaps = 48/212 (22%)
Query: 2 AAAGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPP 61
AA S RA AA A S+ RR R A GAPG P V +PP PP PP
Sbjct: 24 AALAISGRADEEGAAGAGSKLWRRPR----GAVSAGAPG---SPLYRVSAPPPAPPPPPP 76
Query: 62 --------RPEESGCAGCLEPPG--------EAAALPCGHSLCRGCAQRAADAAGPG--- 102
RP G PG A G C A AA GP
Sbjct: 77 PGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQ 136
Query: 103 -CPRCRARGPGWAR-RRARDDGQADSEVLG----ECARRSQPERCRPRRDGGAAAAGPRP 156
P R PG A RA G+ SE G ECARR P G A+G
Sbjct: 137 VPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRV------PLHHGPPGASGVGS 190
Query: 157 E--------QEPRAAPAEPDF--IFRAPIKLS 178
E Q P P P + R P+ LS
Sbjct: 191 ERDRKFQLHQTPARGPPFPGISGMTRGPVVLS 222
Score = 45.4 bits (106), Expect = 2e-04
Identities = 53/168 (31%), Positives = 65/168 (38%), Gaps = 29/168 (17%)
Query: 4 AGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRP 63
AG + R +AAA + ++RG R A +T +PGPA SPP P P
Sbjct: 111 AGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPA--------SPPRASPGGRPGS 162
Query: 64 EESGCAG--CLE-------PPGEAAALPCGHSLCRGCAQRAADAAGPGCPRC--RARGP- 111
E G +G C PPG + G R A GP P RGP
Sbjct: 163 EARGRSGAECARRVPLHHGPPGASGV---GSERDRKFQLHQTPARGPPFPGISGMTRGPV 219
Query: 112 ---GWARRRARDDGQADSEVLGECARRSQPERC--RPRRDGGAAAAGP 154
G R+ G + S LGE A +P R RPR G A GP
Sbjct: 220 VLSGVNRQHRWPPGASPSRSLGE-AGGERPARALRRPRAPGRAGGGGP 266
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.0 bits (110), Expect = 6e-05
Identities = 72/233 (30%), Positives = 89/233 (38%), Gaps = 53/233 (22%)
Query: 1 MAAAGPSTRASSAAAAAALS-------RRGRRGRCDETAAAKTGAP----------GP-- 41
+AAA P+ RA AAAAAA + + G R + AA AP GP
Sbjct: 140 VAAAAPA-RAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRR 198
Query: 42 ASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGP 101
A P++ PPL PP PP P + PP + P G A RA AA P
Sbjct: 199 APPPAVAAREPPLPPPPQPPAPPQQQ----QPPPPQPQPPP------EGGAVRAGGAARP 248
Query: 102 GCPRCRAR------GPGWARRRARDDGQADSEVLGECARRSQPERCRPRRDGGAAAAGPR 155
R R G G R R G + E A R + E R R A G R
Sbjct: 249 VSLREVVRYLGGSGGAGGRLTRGRVQGLLEE----EAAARGRLE--RTRLGALALPRGDR 302
Query: 156 PEQEPRAAPAEPDFIFRAPIKLSKPGELREEYESLRKLREEKLQEEKPSEDQI 208
P + P AA A P + + GE R L K EE E++ ED +
Sbjct: 303 PGRAPPAASARPS-------RSKRGGEER----VLEKEEEEDDDEDEDEEDDV 344
Score = 30.0 bits (66), Expect = 7.7
Identities = 47/167 (28%), Positives = 57/167 (34%), Gaps = 29/167 (17%)
Query: 7 STRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRP--- 63
S + S + AA + RRG T A AP A + PP PP PP P
Sbjct: 86 SYKGSISYRNAARVQPPRRGA---TPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAA 142
Query: 64 ------EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAAD-AAGPGCPRC-RARGPGWAR 115
+ A PP A P AQRAA AA P P A P
Sbjct: 143 AAPARAPRAAAAAATAPPSPGPAQPGPR------AQRAAPLAAPPPAPAAPPAVAPPAGP 196
Query: 116 RRARDDGQADSE---------VLGECARRSQPERCRPRRDGGAAAAG 153
RRA A E ++ P + +P +GGA AG
Sbjct: 197 RRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAG 243
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 45.8 bits (107), Expect = 1e-04
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARDDGQ 123
E+ CA CL + LPCGH+ C C + D G CP CR P A R
Sbjct: 8 EKLTCAICLGLYQDPVTLPCGHNFCGACIRDWWDRCGKACPECREPFPDGAELRRNVALS 67
Query: 124 ADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPR 161
EV+ R P RD G GP P+ R
Sbjct: 68 GVLEVV----------RAGPARDPG-PDPGPGPDPAAR 94
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 45.8 bits (107), Expect = 1e-04
Identities = 67/311 (21%), Positives = 109/311 (35%), Gaps = 52/311 (16%)
Query: 4 AGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRP 63
A P R S++ A+ + R T+ + +P P+ GP + PP PP P
Sbjct: 445 ASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTL-------PPKPPSP 497
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRARDDGQ 123
+ A P G + A+ + AAGP ++RRA ++ +
Sbjct: 498 RGT------------TASPKGRVRRKEEAKESPSAAGP-------EDKSQSKRRASNEKE 538
Query: 124 ADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIF-----RAPIKLS 178
+ + P P A P+ EQ P P + + P+ S
Sbjct: 539 S-----------AAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPS 587
Query: 179 KP-GELREEYESLRKLREEKLQ--EEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVL 235
KP + E+ R L E++ Q E++ E+Q +L E KR +EQ R+
Sbjct: 588 KPMAGTTDREEATRLLAEKRRQAREQREREEQERRL---QAERDKRMREEQLARE----A 640
Query: 236 KTNLERCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKLNSKVERSQSCSD 295
+ ER E E + Q Q + + ++ER +
Sbjct: 641 EARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQ 700
Query: 296 TAQERAKSRVR 306
QER + R R
Sbjct: 701 QEQERQERRKR 711
Score = 38.1 bits (87), Expect = 0.028
Identities = 53/229 (23%), Positives = 85/229 (37%), Gaps = 17/229 (7%)
Query: 9 RASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRPEESGC 68
+ S +AA + +R +E +A +P P+ PS P Q PP +
Sbjct: 515 KESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPP---QKEQPPAETPTDA 571
Query: 69 AGCLEPPGEAAAL----PCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARRRA-RDDGQ 123
A PP A + P + R A R R R R +A RD
Sbjct: 572 AVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRM 631
Query: 124 ADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPDFIFRAPIKLSKPGEL 183
+ ++ E R++ E RR+ A + EQE + + K
Sbjct: 632 REEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQ--------KEEAEARS 683
Query: 184 REEYESLRKLREEKLQEEKPSEDQIHKLLPEDTE-TGKRKMDEQKKRDE 231
REE E R RE+ Q+++ + K L E + T K ++ E K++ +
Sbjct: 684 REEAERQRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQD 732
Score = 32.0 bits (71), Expect = 2.0
Identities = 59/248 (23%), Positives = 81/248 (32%), Gaps = 46/248 (18%)
Query: 100 GPGCPRCRARGPGWARRRARDDGQADSEVLGECARRSQPERCRPR-------RDGGAAAA 152
G GC RGP W R A AR QP+R P R A+
Sbjct: 325 GRGCDP--GRGPTWGRAGA------------SLARGPQPDRTHPSAAVPVCPRSASASPL 370
Query: 153 GPRPEQEP--RAAPAEPDFIFRAPIKLSKPGELREEYESLRKLREEKLQEEKPSEDQIHK 210
P R APA R P P +R E+ ++EK +E+ +E +
Sbjct: 371 TPCSVTRSVHRCAPAGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSA 430
Query: 211 LLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPA-RLSDSENEEPSRGQMTQTHR--SAF 267
L R+ +K++ P + L A LS PS T HR S
Sbjct: 431 L--------ARERSLKKRQSLPASPRARLSASTASELSPKSKARPS-SPSTSWHRPASPC 481
Query: 268 VSKNNSYSL-----------AFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVT 316
S ++L A G++ K E +S S E R K
Sbjct: 482 PSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAA 541
Query: 317 TMTPASNP 324
+PA +P
Sbjct: 542 PASPAPSP 549
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 45.4 bits (106), Expect = 2e-04
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 59 LPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPG--CPRCRA 108
L P EE C+ CLEP E PCGH+ C C G CP+CRA
Sbjct: 4 LCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRA 55
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 45.1 bits (105), Expect = 2e-04
Identities = 52/207 (25%), Positives = 78/207 (37%), Gaps = 32/207 (15%)
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRA-ADAAGP-GCPRCR------ARGPGWAR 115
EE C CL+ + ++ CGH+ CRGC R A GP CP CR A P WA
Sbjct: 8 EELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPNWAL 67
Query: 116 RRARDDGQ---ADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRA---APAEPDF 169
R + Q G C R +P R D R QE + AP + F
Sbjct: 68 ARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAMAPIDEAF 127
Query: 170 IFRAPIKLSKPGELREEYESLRKLREEKLQEEKPSEDQI--------------HKLLPED 215
L L + + + L++ +++ +D+I H L E+
Sbjct: 128 ESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKLHNFLVEE 187
Query: 216 TETGKRKM----DEQKKRDEPLVLKTN 238
+ +++ +E KK+ LK N
Sbjct: 188 EDLFLQRLNKEEEETKKKLNENTLKLN 214
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 44.7 bits (104), Expect = 3e-04
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRA-ADAAGP-GCPRCR------ARGPGWAR 115
EE C CL+ + ++ CGH+ CRGC R A GP CP CR A P WA
Sbjct: 8 EELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAALRPNWAL 67
Query: 116 RRARDDGQ---ADSEVLGECARRSQPER 140
R + Q G C R +P R
Sbjct: 68 ARLTEKTQRRRLGPVPPGLCGRHWEPLR 95
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 44.7 bits (104), Expect = 3e-04
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 28/130 (21%)
Query: 3 AAGPS----TRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPP 58
AAGP ASS +A AA S G A T AP PAS P+ P PP
Sbjct: 59 AAGPDDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPA---PGPSAGPPP 115
Query: 59 LPPRPEESGCAGCLEP-----PGEAAALPCGHSLCRGC---AQRAADAAGPG-------- 102
PP CA C + E LPC HS C C +R PG
Sbjct: 116 GPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDIQQ 175
Query: 103 -----CPRCR 107
CP CR
Sbjct: 176 VGVIRCPVCR 185
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 44.7 bits (104), Expect = 3e-04
Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 28/130 (21%)
Query: 3 AAGPS----TRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPP 58
AAGP ASS +A AA S G A T AP PAS P+ P PP
Sbjct: 59 AAGPDDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPA---PGPSAGPPP 115
Query: 59 LPPRPEESGCAGCLEP-----PGEAAALPCGHSLCRGC---AQRAADAAGPG-------- 102
PP CA C + E LPC HS C C +R PG
Sbjct: 116 GPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDIQQ 175
Query: 103 -----CPRCR 107
CP CR
Sbjct: 176 VGVIRCPVCR 185
>gi|30425428 deltex homolog 3 [Homo sapiens]
Length = 347
Score = 44.7 bits (104), Expect = 3e-04
Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 52 PPLLQPPLPPR------PEESGCAGCLEPPGEAAAL-PCGHSLCRGCAQRAADAAGPGCP 104
PP L PPLPPR +ES C CL A L C HS C GC RA CP
Sbjct: 142 PPPLPPPLPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFCEGCITRALQVK-KACP 200
Query: 105 RC 106
C
Sbjct: 201 MC 202
>gi|254028232 MAP/microtubule affinity-regulating kinase 2 isoform c
[Homo sapiens]
Length = 724
Score = 43.9 bits (102), Expect = 5e-04
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 47/239 (19%)
Query: 268 VSKNNSYSLAFLAGKL-NSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPII 326
+ +NSYS + N + E + A AK +PG + K TT TP++N +
Sbjct: 416 IPTSNSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLERKKTTPTPSTNSV- 474
Query: 327 GVLLSTQNNRCVSAP----------------DLTIEKRLPFSSLSS---LASLHKPERSV 367
LST NR ++P D T +R+P +S S+ +S P+R+
Sbjct: 475 ---LSTSTNRSRNSPLLERASLGQASIQNGKDSTAPQRVPVASPSAHNISSSGGAPDRTN 531
Query: 368 SPESNDSISE----ELNHFK-----PIVCSPCTPP-----KRLPDGRVLSPLIIKSTPRN 413
P S S +L + P +P +P +R G + S K RN
Sbjct: 532 FPRGVSSRSTFHAGQLRQVRDQQNLPYGVTPASPSGHSQGRRGASGSIFSKFTSKFVRRN 591
Query: 414 LNRSLQKQTSYEASPRIL-----KKWEQIFQE---RQIKKTLSKATLTSLAP-EMGEEL 463
LN K P ++ K ++ F+E R ++ T S T +S+ P EM E+
Sbjct: 592 LNEPESKDRVETLRPHVVGSGGNDKEKEEFREAKPRSLRFTWSMKTTSSMEPNEMMREI 650
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 43.9 bits (102), Expect = 5e-04
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 68 CAGCLEPPGEAAALPCGHSLCRGCA------QRAADAAGPG----CPRCRARGPGWARRR 117
C CLEP E LPCGH+ C C + A+ A GPG CP C+ P + R
Sbjct: 9 CPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQEPFPDGLQLR 68
Query: 118 ARDDGQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEPRAAPAEPD 168
SE+L + + S P G A A P P P A P+ P+
Sbjct: 69 ---KNHTLSELL-QLRQGSGP----GSGPGPAPALAPEP-SAPSALPSVPE 110
Score = 30.0 bits (66), Expect = 7.7
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 39 PGPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADA 98
PG GP+ + P LP PE S A C P A P C C + AA
Sbjct: 85 PGSGPGPAPALAPEPSAPSALPSVPEPS--APCAPEPWPAGEEPV---RCDACPEGAALP 139
Query: 99 AGPGCPRCRA 108
A C C A
Sbjct: 140 AALSCLSCLA 149
>gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens]
Length = 210
Score = 43.5 bits (101), Expect = 7e-04
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 68 CAGCLEPPGEAAALPCGHSLCRGCAQR---AADAAGPGCPRCR---ARGPGWARRRARDD 121
C G L+ P A LPCGHS CR C + A DA CP CR A+ P + D
Sbjct: 24 CQGLLDWP---ATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRKNTLLQD 80
Query: 122 -GQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEP 160
E S P C ++A RP + P
Sbjct: 81 LADKYRRAAREIQAGSDPAHCPCPGSSSLSSAAARPRRRP 120
>gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens]
Length = 432
Score = 43.5 bits (101), Expect = 7e-04
Identities = 32/100 (32%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 68 CAGCLEPPGEAAALPCGHSLCRGCAQR---AADAAGPGCPRCR---ARGPGWARRRARDD 121
C G L+ P A LPCGHS CR C + A DA CP CR A+ P + D
Sbjct: 24 CQGLLDWP---ATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRKNTLLQD 80
Query: 122 -GQADSEVLGECARRSQPERCRPRRDGGAAAAGPRPEQEP 160
E S P C ++A RP + P
Sbjct: 81 LADKYRRAAREIQAGSDPAHCPCPGSSSLSSAAARPRRRP 120
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 43.1 bits (100), Expect = 9e-04
Identities = 39/113 (34%), Positives = 44/113 (38%), Gaps = 8/113 (7%)
Query: 4 AGPSTRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRP 63
A P+TR+ A+AL RR T PGPA L P L P P P
Sbjct: 209 ARPATRSRITLVASALRRRASGP--GPVIRGCTAQPGPAFPHRATHLDPARLSPESAPGP 266
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCRARGPGWARR 116
G A PG A G G A+R D+A PR R PG ARR
Sbjct: 267 ARRGRASV---PGPARR---GCDSAPGPARRGRDSAPVSAPRGRDSAPGSARR 313
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 42.4 bits (98), Expect = 0.002
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 10 ASSAAAAAALSRRGRRGRCDETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRPEESG-- 67
ASS+++++A +R G G +P ++GP L L PL + G
Sbjct: 408 ASSSSSSSAKARAGPPGA--------HRSPATSAGPELAGLPRRPPGEPLQGFSKLGGGG 459
Query: 68 ---------CAGCLEPPGEAAALPCGHSL-CRGCAQRAADAAGPGCPRC 106
C C E AA +PCGH+L C CA R + P CP C
Sbjct: 460 LRSPGGGRDCMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVC 508
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 42.0 bits (97), Expect = 0.002
Identities = 54/179 (30%), Positives = 65/179 (36%), Gaps = 44/179 (24%)
Query: 3 AAGPSTRASSAAAAAALSRRGR-----RGRCDETAAAKTGAPGPASGPSLLVLSPPLLQP 57
A P+ RA AAA + R G RG + A+ S + L SPP LQP
Sbjct: 224 APRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQP 283
Query: 58 PLPPRPEESGCAGCLEPPGEAAALPCGHS--------LCRGCAQRAADAAGPGCPRCRAR 109
L G PP AA L + CR A+R+ G PR +R
Sbjct: 284 RL----------GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 110 GPGWARRRARDDGQADSEVLGECARRSQPE-RCRPRRDGGAAAAGPRPEQEPRAAPAEP 167
G EV+G RR E R R RR G A + P P A PA P
Sbjct: 334 G---------------GEVVGARRRRGGEERRVRGRRQGCALGSPPIP-----AGPAAP 372
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 42.0 bits (97), Expect = 0.002
Identities = 54/179 (30%), Positives = 65/179 (36%), Gaps = 44/179 (24%)
Query: 3 AAGPSTRASSAAAAAALSRRGR-----RGRCDETAAAKTGAPGPASGPSLLVLSPPLLQP 57
A P+ RA AAA + R G RG + A+ S + L SPP LQP
Sbjct: 224 APRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQP 283
Query: 58 PLPPRPEESGCAGCLEPPGEAAALPCGHS--------LCRGCAQRAADAAGPGCPRCRAR 109
L G PP AA L + CR A+R+ G PR +R
Sbjct: 284 RL----------GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333
Query: 110 GPGWARRRARDDGQADSEVLGECARRSQPE-RCRPRRDGGAAAAGPRPEQEPRAAPAEP 167
G EV+G RR E R R RR G A + P P A PA P
Sbjct: 334 G---------------GEVVGARRRRGGEERRVRGRRQGCALGSPPIP-----AGPAAP 372
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 42.0 bits (97), Expect = 0.002
Identities = 35/110 (31%), Positives = 39/110 (35%), Gaps = 26/110 (23%)
Query: 24 RRGRCDETAAAKTGAP-GPASGPSLLVLSPPLLQPPLPPR----PEESG----------- 67
RRG D A P GP S P S P P P +SG
Sbjct: 531 RRGAPDPVGALSWRPPQGPVSFPGGAAFSTATSLPSSPAAAACAPLDSGASENSRKPPSA 590
Query: 68 ---------CAGCLEPPGEAAALPCGHSL-CRGCAQRAADAAGPGCPRCR 107
C C E AA +PCGH+L C CA R + P CP CR
Sbjct: 591 SSAPALARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACR 640
Score = 30.4 bits (67), Expect = 5.9
Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 22/136 (16%)
Query: 32 AAAKTGAPGPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGC 91
AA + PGPA P + P +PP P P+++ A L + +AL G
Sbjct: 23 AAGEDPGPGPAPPPEGAQEAAPAPRPP--PEPDDAAAALRLALD-QLSALGLGG------ 73
Query: 92 AQRAADAAGPGCPRCRARGPGWARRRARDDGQADSEVLGECARRSQPERCRPRRDGGAAA 151
A D G A G G A D G A V + P P A A
Sbjct: 74 ---AGDTDEEG-----AAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAP-----AVA 120
Query: 152 AGPRPEQEPRAAPAEP 167
G P +P A+P P
Sbjct: 121 PGSLPLLDPNASPPPP 136
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 42.0 bits (97), Expect = 0.002
Identities = 50/184 (27%), Positives = 67/184 (36%), Gaps = 12/184 (6%)
Query: 38 APGPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCRGCAQRAAD 97
A GPA G S+ P + P++SG G L P EA + G S R + A D
Sbjct: 272 AEGPA-GDSMDAEGPAGRARRVSGEPQQSG-DGSLSPQAEAIEVAAGESAGRSPGELAWD 329
Query: 98 AAG----PGCPRCRARGPGWARRRARDD--GQADSEVLGECARRSQPERCRPRRDGGAAA 151
AA PG PG AR A +D G + GE R + PR + A
Sbjct: 330 AAEEAEVPGVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREEEAAGG 389
Query: 152 AGPRPEQEPRA----APAEPDFIFRAPIKLSKPGELREEYESLRKLREEKLQEEKPSEDQ 207
P+ P AEP+ + P E E + RE+ E + Q
Sbjct: 390 EEESPDSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAARVNGRREDGEASEPRALGQ 449
Query: 208 IHKL 211
H +
Sbjct: 450 EHDI 453
Score = 30.4 bits (67), Expect = 5.9
Identities = 48/188 (25%), Positives = 68/188 (36%), Gaps = 19/188 (10%)
Query: 30 ETAAAKTGAPGPASGPSLLVLSPPLLQPPLPPRPEESGCAGCLEPPGEAAALPCGHSLCR 89
E A + APGP PP + PL RP E G AG E G + +
Sbjct: 3 EAAEPEGVAPGPQG--------PPEVPAPLAERPGEPGAAGG-EAEGPEGSEGAEEAPRG 53
Query: 90 GCAQRAADAAGPG-CPRCRARGPGWA--RRRARDDGQADSEVLGECARRSQPERCRPRRD 146
A + A GP P ARG A A + +EV S ++
Sbjct: 54 AAAVKEAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQGGEETSGAQQVEGASP 113
Query: 147 GGAAAAGPR----PEQEPRAAPAEPDFIFRAP--IKLSKPGELREEYESLRKLREEKLQE 200
G A PR E E AAP + + P + S GE + ++ L + ++
Sbjct: 114 GRGAQGEPRGEAQREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGPL-GDNIEA 172
Query: 201 EKPSEDQI 208
E P+ D +
Sbjct: 173 EGPAGDSV 180
>gi|254028237 MAP/microtubule affinity-regulating kinase 2 isoform e
[Homo sapiens]
Length = 719
Score = 41.6 bits (96), Expect = 0.003
Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 43/257 (16%)
Query: 245 RLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLAFLAGKL-NSKVERSQSCSDTAQERAKS 303
++ S + P + + + + +NSYS + N + E + A AK
Sbjct: 394 KVQRSVSANPKQRRFSDQAAGPAIPTSNSYSKKTQSNNAENKRPEEDRESGRKASSTAKV 453
Query: 304 RVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAP----------------DLTIEK 347
+PG + K TT TP++N + LST NR ++P D T +
Sbjct: 454 PASPLPGLERKKTTPTPSTNSV----LSTSTNRSRNSPLLERASLGQASIQNGKDSTAPQ 509
Query: 348 RLPFSSLSS---LASLHKPERSVSPESNDSISE----ELNHFK-----PIVCSPCTPP-- 393
R+P +S S+ +S P+R+ P S S +L + P +P +P
Sbjct: 510 RVPVASPSAHNISSSGGAPDRTNFPRGVSSRSTFHAGQLRQVRDQQNLPYGVTPASPSGH 569
Query: 394 ---KRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQE---RQIKKTL 447
+R G + S K RNL+ ++ S K+ E+ F+E R ++ T
Sbjct: 570 SQGRRGASGSIFSKFTSKFVRRNLSFRFARRPHVVGSGGNDKEKEE-FREAKPRSLRFTW 628
Query: 448 SKATLTSLAP-EMGEEL 463
S T +S+ P EM E+
Sbjct: 629 SMKTTSSMEPNEMMREI 645
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 7 STRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPAS--GPSLLVLSPPLLQPPLPP-RP 63
+T +A++ + +R C + +TG P AS P P L PL
Sbjct: 403 ATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPTDQGDKPALSLPLASFDA 462
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCR 107
+ CA C+ E PCGH+ C C +R D CP C+
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLD-HNAKCPLCK 505
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 7 STRASSAAAAAALSRRGRRGRCDETAAAKTGAPGPAS--GPSLLVLSPPLLQPPLPP-RP 63
+T +A++ + +R C + +TG P AS P P L PL
Sbjct: 362 ATSPKAASSKTGKCQEKKRKHCQIESQEETGMPNKASKQDPPTDQGDKPALSLPLASFDA 421
Query: 64 EESGCAGCLEPPGEAAALPCGHSLCRGCAQRAADAAGPGCPRCR 107
+ CA C+ E PCGH+ C C +R D CP C+
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLD-HNAKCPLCK 464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,140,242
Number of Sequences: 37866
Number of extensions: 1724007
Number of successful extensions: 11953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 678
Number of HSP's that attempted gapping in prelim test: 10463
Number of HSP's gapped (non-prelim): 2114
length of query: 708
length of database: 18,247,518
effective HSP length: 109
effective length of query: 599
effective length of database: 14,120,124
effective search space: 8457954276
effective search space used: 8457954276
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.