Guide to the Human Genome
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Name: MARK2 Sequence: fasta or formatted (724aa) NCBI GI: 254028232
Description:

MAP/microtubule affinity-regulating kinase 2 isoform c

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [788aa] MAP/microtubule affinity-regulating kinase 2 isoform d
alt prot [719aa] MAP/microtubule affinity-regulating kinase 2 isoform e
alt prot [709aa] MAP/microtubule affinity-regulating kinase 2 isoform f
alt prot [745aa] MAP/microtubule affinity-regulating kinase 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         40           2
 C cysteine            0.8          6           1
 D aspartate           4.3         31           2
 E glutamate           7.0         51           2
 F phenylalanine       3.6         26           1
 G glycine             6.2         45           2
 H histidine           2.2         16           1
 I isoleucine          3.7         27           2
 K lysine              7.7         56           2
 L leucine             8.8         64           3
 M methionine          2.8         20           2
 N asparagine          5.2         38           2
 P proline             6.2         45           2
 Q glutamine           3.6         26           2
 R arginine            7.3         53           2
 S serine             10.5         76           3
 T threonine           5.7         41           2
 V valine              5.5         40           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAP/microtubule affinity-regulating kinase 2 isofor... 
MARK2                 0.974   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.972   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.963   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.926   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK1                 0.653   MAP/microtubule affinity-regulating kinase 1 
MARK3                 0.629   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.627   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.622   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK3                 0.619   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK4                 0.438   MAP/microtubule affinity-regulating kinase 4 
MARK3                 0.323   MAP/microtubule affinity-regulating kinase 3 isofor...
QSK                   0.252   serine/threonine-protein kinase QSK 
SIK1                  0.236   SNF1-like kinase 
SIK2                  0.234   SNF1-like kinase 2 
BRSK1                 0.191   BR serine/threonine kinase 1 
BRSK2                 0.185   BR serine/threonine kinase 2 
MELK                  0.173   maternal embryonic leucine zipper kinase 
SNRK                  0.172   SNF related kinase 
SNRK                  0.172   SNF related kinase 
PRKAA1                0.171   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA2                0.170   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.163   protein kinase, AMP-activated, alpha 1 catalytic sub...
NUAK1                 0.163   AMPK-related protein kinase 5 
MGC42105              0.162   serine/threonine-protein kinase NIM1 
NUAK2                 0.161   NUAK family, SNF1-like kinase, 2 
HUNK                  0.138   hormonally upregulated Neu-associated kinase 
TSSK1B                0.117   testis-specific serine kinase 1 
TSSK3                 0.113   testis-specific serine kinase 3 
TSSK2                 0.111   testis-specific serine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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