Guide to the Human Genome
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Name: TTN Sequence: fasta or formatted (5604aa) NCBI GI: 110349721
Description:

titin isoform novex-3

Referenced in:

Fibronectin Family
Muscle
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [27051aa] titin isoform novex-1
alt prot [26926aa] titin isoform N2-B
alt prot [27118aa] titin isoform novex-2
alt prot [33423aa] titin isoform N2-A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1        340           3
 C cysteine            1.2         66           1
 D aspartate           4.5        252           2
 E glutamate          10.9        612           4
 F phenylalanine       3.2        181           2
 G glycine             4.8        270           2
 H histidine           2.2        126           3
 I isoleucine          5.8        324           2
 K lysine              7.7        433           3
 L leucine             6.1        342           3
 M methionine          1.8        102           2
 N asparagine          2.8        157           2
 P proline             5.4        301           3
 Q glutamine           4.7        264           2
 R arginine            5.1        285           2
 S serine              8.2        459           3
 T threonine           7.5        419           4
 V valine              8.2        457           3
 W tryptophan          0.7         41           1
 Y tyrosine            3.1        173           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   titin isoform novex-3 
TTN                   0.612   titin isoform N2-A 
TTN                   0.587   titin isoform N2-B 
TTN                   0.584   titin isoform novex-1 
TTN                   0.582   titin isoform novex-2 
OBSCN                 0.038   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.038   obscurin, cytoskeletal calmodulin and titin-interac...
OBSL1                 0.024   obscurin-like 1 
PALLD                 0.022   palladin 
HMCN1                 0.018   hemicentin 1 
MYPN                  0.018   myopalladin 
HMCN2                 0.017   PREDICTED: hemicentin 2 
HMCN2                 0.017   PREDICTED: hemicentin 2 
HMCN2                 0.017   PREDICTED: hemicentin 2 
IGSF22                0.016   immunoglobulin superfamily, member 22 
SPEG                  0.011   SPEG complex locus 
MYBPC1                0.010   myosin binding protein C, slow type isoform 4 
MYBPC1                0.010   myosin binding protein C, slow type isoform 3 
MYBPC1                0.010   myosin binding protein C, slow type isoform 2 
MYBPC1                0.010   myosin binding protein C, slow type isoform 1 
MYOT                  0.009   myotilin isoform b 
MYOT                  0.009   myotilin isoform a 
MYBPC2                0.009   myosin binding protein C, fast type 
MYBPC3                0.008   myosin binding protein C, cardiac 
MYLK                  0.008   myosin light chain kinase isoform 3A 
MYLK                  0.008   myosin light chain kinase isoform 1 
MYLK                  0.008   myosin light chain kinase isoform 3B 
MYLK                  0.008   myosin light chain kinase isoform 2 
ROBO2                 0.008   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.008   roundabout, axon guidance receptor, homolog 2 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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