PALLD 37367

Name: PALLD	Sequence: fasta or formatted (1106aa)		NCBI GI: 93102361
Description: palladin		Referenced in: Lysosomes and Related Organelles
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 80 2 C cysteine 2.0 22 1 D aspartate 4.9 54 3 E glutamate 7.7 85 3 F phenylalanine 3.3 36 2 G glycine 5.8 64 2 H histidine 2.7 30 1 I isoleucine 4.2 47 2 K lysine 5.6 62 2 L leucine 7.1 79 2 M methionine 1.5 17 1 N asparagine 4.0 44 2 P proline 8.0 88 5 Q glutamine 5.2 57 2 R arginine 6.2 69 2 S serine 10.2 113 3 T threonine 6.4 71 3 V valine 5.3 59 3 W tryptophan 0.5 6 1 Y tyrosine 2.1 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 palladin MYPN 0.250 myopalladin TTN 0.111 titin isoform novex-3 TTN 0.111 titin isoform N2-A TTN 0.111 titin isoform novex-2 TTN 0.111 titin isoform novex-1 TTN 0.111 titin isoform N2-B MYOT 0.099 myotilin isoform b MYOT 0.099 myotilin isoform a MYLK 0.076 myosin light chain kinase isoform 3B MYLK 0.076 myosin light chain kinase isoform 2 MYLK 0.076 myosin light chain kinase isoform 3A MYLK 0.076 myosin light chain kinase isoform 1 HMCN1 0.050 hemicentin 1 HMCN2 0.045 PREDICTED: hemicentin 2 HMCN2 0.045 PREDICTED: hemicentin 2 HMCN2 0.045 PREDICTED: hemicentin 2 SPEG 0.044 SPEG complex locus OBSCN 0.044 obscurin, cytoskeletal calmodulin and titin-interact... OBSCN 0.044 obscurin, cytoskeletal calmodulin and titin-interac... ROBO3 0.035 roundabout, axon guidance receptor, homolog 3 ROBO1 0.034 roundabout 1 isoform d ROBO1 0.034 roundabout 1 isoform c LOC642132 0.034 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.034 PREDICTED: similar to roundabout 1 isoform 2 ROBO1 0.034 roundabout 1 isoform b ROBO1 0.034 roundabout 1 isoform a PXDN 0.033 peroxidasin CNTN5 0.033 contactin 5 isoform long CNTN5 0.033 contactin 5 isoform short Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.