Guide to the Human Genome
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Name: CDCA2 Sequence: fasta or formatted (1023aa) NCBI GI: 44681484
Description:

cell division cycle associated 2

Referenced in:

Serine / Threonine Protein Phosphatases
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         52           2
 C cysteine            2.6         27           2
 D aspartate           5.2         53           3
 E glutamate           8.2         84           2
 F phenylalanine       3.2         33           2
 G glycine             5.3         54           2
 H histidine           1.3         13           1
 I isoleucine          3.6         37           1
 K lysine              8.7         89           3
 L leucine             8.0         82           3
 M methionine          1.4         14           1
 N asparagine          5.8         59           2
 P proline             6.6         68           2
 Q glutamine           3.8         39           2
 R arginine            6.2         63           3
 S serine             13.4        137           4
 T threonine           5.5         56           1
 V valine              5.0         51           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle associated 2 
MKI67                 0.015   antigen identified by monoclonal antibody Ki-67 iso...
MKI67                 0.015   antigen identified by monoclonal antibody Ki-67 iso...
BOD1L                 0.014   biorientation of chromosomes in cell division 1-like...
ALPK2                 0.012   heart alpha-kinase 
SRPK1                 0.008   SFRS protein kinase 1 
CEP170                0.008   centrosomal protein 170kDa isoform gamma 
CEP170                0.007   centrosomal protein 170kDa isoform beta 
CEP170                0.007   centrosomal protein 170kDa isoform alpha 
NEFH                  0.007   neurofilament, heavy polypeptide 200kDa 
MPHOSPH8              0.006   M-phase phosphoprotein 8 
TGOLN2                0.006   trans-golgi network protein 2 
NEFM                  0.006   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.006   neurofilament, medium polypeptide 150kDa isoform 2 ...
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.006   retinoblastoma-binding protein 6 isoform 1 
SRRM2                 0.006   splicing coactivator subunit SRm300 
HSPA4                 0.006   heat shock 70kDa protein 4 
MDC1                  0.006   mediator of DNA-damage checkpoint 1 
MUM1L1                0.006   melanoma associated antigen (mutated) 1-like 1 [Homo...
THRAP3                0.006   thyroid hormone receptor associated protein 3 [Homo...
CHD9                  0.005   chromodomain helicase DNA binding protein 9 
TBC1D2                0.005   TBC1 domain family, member 2 
LAD1                  0.005   ladinin 1 
MECP2                 0.005   methyl CpG binding protein 2 isoform 2 
MECP2                 0.005   methyl CpG binding protein 2 isoform 1 
AP3D1                 0.005   adaptor-related protein complex 3, delta 1 subunit ...
C10orf18              0.005   hypothetical protein LOC54906 
KIAA0922              0.004   hypothetical protein LOC23240 isoform 2 
KIAA0922              0.004   hypothetical protein LOC23240 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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