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Search of human proteins with 148277111
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148277111 oncomodulin-like [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148277111 oncomodulin-like [Homo sapiens] 216 3e-57
gi|147906122 oncomodulin [Homo sapiens] 213 2e-56
gi|4506335 parvalbumin [Homo sapiens] 112 8e-26
gi|4507615 troponin C, slow [Homo sapiens] 49 7e-07
gi|58218968 calmodulin 3 [Homo sapiens] 49 1e-06
gi|4502549 calmodulin 2 [Homo sapiens] 49 1e-06
gi|5901912 calmodulin 1 [Homo sapiens] 49 1e-06
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 47 3e-06
gi|4885111 calmodulin-like 3 [Homo sapiens] 46 7e-06
gi|55749678 ninein-like [Homo sapiens] 45 1e-05
gi|50897266 calmodulin-like 6 [Homo sapiens] 45 2e-05
gi|223278387 calmodulin-like 5 [Homo sapiens] 42 1e-04
gi|153946409 calbindin 2 isoform 1 [Homo sapiens] 42 1e-04
gi|6031162 calbindin 2 isoform 22k [Homo sapiens] 42 1e-04
gi|4757974 centrin 1 [Homo sapiens] 42 1e-04
gi|4757902 caltractin [Homo sapiens] 41 2e-04
gi|63054822 calneuron 1 isoform 2 [Homo sapiens] 40 5e-04
gi|157743275 calneuron 1 isoform 1 [Homo sapiens] 40 5e-04
gi|223718250 plastin 1 [Homo sapiens] 39 9e-04
gi|223718246 plastin 1 [Homo sapiens] 39 9e-04
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 39 0.001
gi|33188443 microfilament and actin filament cross-linker protei... 37 0.003
gi|33188445 microfilament and actin filament cross-linker protei... 37 0.003
gi|11067753 calcium binding protein 5 [Homo sapiens] 37 0.003
gi|221316624 dystonin isoform 4 [Homo sapiens] 37 0.004
gi|221316622 dystonin isoform 3 [Homo sapiens] 37 0.004
gi|221316618 dystonin isoform 2 [Homo sapiens] 37 0.004
gi|34577047 dystonin isoform 1 [Homo sapiens] 37 0.004
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 37 0.004
gi|46397403 centrin 3 [Homo sapiens] 37 0.004
>gi|148277111 oncomodulin-like [Homo sapiens]
Length = 109
Score = 216 bits (550), Expect = 3e-57
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD 60
MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD
Sbjct: 1 MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD 60
Query: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS 109
EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS
Sbjct: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS 109
>gi|147906122 oncomodulin [Homo sapiens]
Length = 109
Score = 213 bits (543), Expect = 2e-56
Identities = 107/109 (98%), Positives = 109/109 (100%)
Query: 1 MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD 60
MSITDVLSADDIAAALQEC+DPDTFEPQKFFQTSGLSKMSA+QVKDVFRFIDNDQSGYLD
Sbjct: 1 MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLD 60
Query: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS 109
EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS
Sbjct: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVHS 109
>gi|4506335 parvalbumin [Homo sapiens]
Length = 110
Score = 112 bits (279), Expect = 8e-26
Identities = 55/107 (51%), Positives = 74/107 (69%)
Query: 1 MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD 60
MS+TD+L+A+DI A+ D+F+ +KFFQ GL K SA VK VF +D D+SG+++
Sbjct: 1 MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
Query: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
E+EL F L+ F AR+L+ ETK LMAA D DGDGKIG +EF +V
Sbjct: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 49.3 bits (116), Expect = 7e-07
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
S ++ D+FR D + GY+D +ELK LQ + +TE + + LM D + DG+I
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQ---ATGETITEDDIEELMKDGDKNNDGRID 149
Query: 100 AEEFQEMV 107
+EF E +
Sbjct: 150 YDEFLEFM 157
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
S ++++ FR D D +GY+ EL+ + +LT+ E ++ AD DGDG++
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 138
Query: 100 AEEFQEMV 107
EEF +M+
Sbjct: 139 YEEFVQMM 146
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
L++ ++ K+ F D D G + +EL ++ + TE+E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---GQNPTEAELQDMINEVDADGN 61
Query: 96 GKIGAEEFQEMV 107
G I EF M+
Sbjct: 62 GTIDFPEFLTMM 73
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
S ++++ FR D D +GY+ EL+ + +LT+ E ++ AD DGDG++
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 138
Query: 100 AEEFQEMV 107
EEF +M+
Sbjct: 139 YEEFVQMM 146
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
L++ ++ K+ F D D G + +EL ++ + TE+E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---GQNPTEAELQDMINEVDADGN 61
Query: 96 GKIGAEEFQEMV 107
G I EF M+
Sbjct: 62 GTIDFPEFLTMM 73
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-06
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
S ++++ FR D D +GY+ EL+ + +LT+ E ++ AD DGDG++
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTDEEVDEMIREADIDGDGQVN 138
Query: 100 AEEFQEMV 107
EEF +M+
Sbjct: 139 YEEFVQMM 146
Score = 33.5 bits (75), Expect = 0.038
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
L++ ++ K+ F D D G + +EL ++ + TE+E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---GQNPTEAELQDMINEVDADGN 61
Query: 96 GKIGAEEFQEMV 107
G I EF M+
Sbjct: 62 GTIDFPEFLTMM 73
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 47.4 bits (111), Expect = 3e-06
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
S ++ + FR D + GY+D EEL + F + +T+ E +SLM D + DG+I
Sbjct: 92 SEEELAECFRIFDRNADGYIDPEELA---EIFRASGEHVTDEEIESLMKDGDKNNDGRID 148
Query: 100 AEEFQEMV 107
+EF +M+
Sbjct: 149 FDEFLKMM 156
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 34 SGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADND 93
S LS+ ++ K F D D G + +EL ++ + T+ E +++ D D
Sbjct: 10 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRML---GQTPTKEELDAIIEEVDED 66
Query: 94 GDGKIGAEEFQEMV 107
G G I EEF M+
Sbjct: 67 GSGTIDFEEFLVMM 80
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 45.8 bits (107), Expect = 7e-06
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
++++ FR D D +G++ EL+ + + +L++ E ++ AAD DGDG++ EE
Sbjct: 85 EIREAFRVFDKDGNGFVSAAELRHVMTRL---GEKLSDEEVDEMIRAADTDGDGQVNYEE 141
Query: 103 FQEMVHS 109
F ++ S
Sbjct: 142 FVRVLVS 148
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
L++ ++ K+ F D D G + EL ++ + TE+E + +M+ D DG+
Sbjct: 5 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL---GQNPTEAELRDMMSEIDRDGN 61
Query: 96 GKIGAEEFQEMV 107
G + EF M+
Sbjct: 62 GTVDFPEFLGMM 73
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGAREL-TESETKSLMAAADNDGDGKIGA 100
++++D+ ID D +G +D E FL ++ E E + D DG+G + A
Sbjct: 47 AELRDMMSEIDRDGNGTVDFPE---FLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSA 103
Query: 101 EEFQEMV 107
E + ++
Sbjct: 104 AELRHVM 110
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 45.1 bits (105), Expect = 1e-05
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 16 LQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGA 75
LQ D PQK S SQ++ V+ + SG+L E+EL Q G
Sbjct: 175 LQTWDSEDFGSPQKSCSPS--FDTPESQIRGVWEELGVGSSGHLSEQELAVVCQSV--GL 230
Query: 76 RELTESETKSLMAAADNDGDGKIGAEEFQ 104
+ L + E + L D DGDGK+ EEFQ
Sbjct: 231 QGLEKEELEDLFNKLDQDGDGKVSLEEFQ 259
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
SQ+++V+ D +G+LD +EL K L + L ND ++ E
Sbjct: 10 SQLREVYSSCDTTGTGFLDRQELTQLCLKL-----HLEQQLPVLLQTLLGNDHFARVNFE 64
Query: 102 EFQE 105
EF+E
Sbjct: 65 EFKE 68
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 32 QTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETK 84
Q+ GL + +++D+F +D D G + EE F L F L ES T+
Sbjct: 226 QSVGLQGLEKEELEDLFNKLDQDGDGKVSLEE--FQLGLFSHEPALLLESSTR 276
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 44.7 bits (104), Expect = 2e-05
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+++ FR D + GY+D LK+ L + L E E + +M AD DGD I E
Sbjct: 110 SELRAAFRVFDKEGKGYIDWNTLKYVLM---NAGEPLNEVEAEQMMKEADKDGDRTIDYE 166
Query: 102 EFQEMV 107
EF M+
Sbjct: 167 EFVAMM 172
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 41.6 bits (96), Expect = 1e-04
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
L+ +Q K F +D D +G ++ +EL L+ + + L+E++ + L++ D+DGD
Sbjct: 5 LTPEEEAQYKKAFSAVDTDGNGTINAQELGAALK---ATGKNLSEAQLRKLISEVDSDGD 61
Query: 96 GKIGAEEF 103
G+I +EF
Sbjct: 62 GEISFQEF 69
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 28 QKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLM 87
Q+F + ++ ++ FR D D G++ +EL+ + + L + E +++
Sbjct: 67 QEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELR---RAMAGLGQPLPQEELDAMI 123
Query: 88 AAADNDGDGKIGAEEFQEMV 107
AD D DG++ EEF M+
Sbjct: 124 READVDQDGRVNYEEFARML 143
>gi|153946409 calbindin 2 isoform 1 [Homo sapiens]
Length = 271
Score = 41.6 bits (96), Expect = 1e-04
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFE---SGARELTESET-----KSLM 87
L++++ASQ ++++ D D +GY++ +EL+ F Q+ E G+ +++S+ K M
Sbjct: 13 LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFM 72
Query: 88 AAADNDGDGKIGAEEFQEMV 107
D + DGKI E +++
Sbjct: 73 QKYDKNSDGKIEMAELAQIL 92
Score = 40.0 bits (92), Expect = 4e-04
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARE-----LTESETKSLMAAADNDG 94
S+++ + +R D D+SGY++ ELK FL A + T++++ D +G
Sbjct: 108 SSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNG 167
Query: 95 DGKIGAEEFQEMV 107
DGK+G E ++
Sbjct: 168 DGKLGLSEMSRLL 180
Score = 36.2 bits (82), Expect = 0.006
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 38 KMSASQVKDVFRFIDNDQSGYLDEEELKFFLQ------KFESGARELTESETKSLMAAAD 91
K+++ + +F F D D+SGY+DE EL L+ K E ++LT + KS+M+ A+
Sbjct: 194 KLTSEEFNAIFTFYDKDRSGYIDEHELDALLKDLYEKNKKEMNIQQLT-NYRKSVMSLAE 252
>gi|6031162 calbindin 2 isoform 22k [Homo sapiens]
Length = 192
Score = 41.6 bits (96), Expect = 1e-04
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFE---SGARELTESET-----KSLM 87
L++++ASQ ++++ D D +GY++ +EL+ F Q+ E G+ +++S+ K M
Sbjct: 13 LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFM 72
Query: 88 AAADNDGDGKIGAEEFQEMV 107
D + DGKI E +++
Sbjct: 73 QKYDKNSDGKIEMAELAQIL 92
Score = 39.3 bits (90), Expect = 7e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 40 SASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARE-----LTESETKSLMAAADNDG 94
S+++ + +R D D+SGY++ ELK FL A + T++++ D +G
Sbjct: 108 SSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQTILRMFDLNG 167
Query: 95 DGKIGAEEFQEM 106
DGK+G E +
Sbjct: 168 DGKLGLSEMSRI 179
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 41.6 bits (96), Expect = 1e-04
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 38 KMSASQVKD----VFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADND 93
KMS K+ FR D+D++G + + LK + LT+ E + ++ AD D
Sbjct: 96 KMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANEL---GENLTDEELQEMIDEADRD 152
Query: 94 GDGKIGAEEF 103
GDG++ EEF
Sbjct: 153 GDGEVNEEEF 162
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 31 FQTSGLSKMSASQVKD----VFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSL 86
F T KMS K+ F+ D+D++G + + LK ++ LT+ E + +
Sbjct: 89 FLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL---GENLTDEELQEM 145
Query: 87 MAAADNDGDGKIGAEEF 103
+ AD DGDG++ +EF
Sbjct: 146 IDEADRDGDGEVSEQEF 162
>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
Length = 219
Score = 39.7 bits (91), Expect = 5e-04
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 32 QTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAAD 91
Q + +S ++++ FR +D D +G++ ++EL ++ S +E E +M D
Sbjct: 29 QLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMR---SLGYMPSEVELAIIMQRLD 85
Query: 92 NDGDGKIGAEEFQEMV 107
DGDG++ +EF ++
Sbjct: 86 MDGDGQVDFDEFMTIL 101
>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
Length = 261
Score = 39.7 bits (91), Expect = 5e-04
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 32 QTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAAD 91
Q + +S ++++ FR +D D +G++ ++EL ++ S +E E +M D
Sbjct: 71 QLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMR---SLGYMPSEVELAIIMQRLD 127
Query: 92 NDGDGKIGAEEFQEMV 107
DGDG++ +EF ++
Sbjct: 128 MDGDGQVDFDEFMTIL 143
>gi|223718250 plastin 1 [Homo sapiens]
Length = 629
Score = 38.9 bits (89), Expect = 9e-04
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 33 TSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESG-----ARELTESETKSLM 87
T+ +S+ ++++ F ID D SGY+ + EL+ ++ RE+ E ++
Sbjct: 5 TTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEK----IL 60
Query: 88 AAADNDGDGKIGAEEFQEMV 107
+ AD++ DGKI EEF ++
Sbjct: 61 SVADSNKDGKISFEEFVSLM 80
>gi|223718246 plastin 1 [Homo sapiens]
Length = 629
Score = 38.9 bits (89), Expect = 9e-04
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 33 TSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESG-----ARELTESETKSLM 87
T+ +S+ ++++ F ID D SGY+ + EL+ ++ RE+ E ++
Sbjct: 5 TTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEK----IL 60
Query: 88 AAADNDGDGKIGAEEFQEMV 107
+ AD++ DGKI EEF ++
Sbjct: 61 SVADSNKDGKISFEEFVSLM 80
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 38.5 bits (88), Expect = 0.001
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 7 LSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKF 66
L ++ AA + C+ F P F S+ ++ +F+ D + G++D ELK
Sbjct: 63 LDINEGAARPRRCR---VFNPYTEFPE--FSRRLIKDLESMFKLYDAGRDGFIDLMELKL 117
Query: 67 FLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMVH 108
++K GA + T KS++ D D DGK+ EF + H
Sbjct: 118 MMEKL--GAPQ-THLGLKSMIKEVDEDFDGKLSFREFLLIFH 156
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ + T+ E ++ D DGDG I
Sbjct: 5588 SRVMDFFRRIDKDQDGKITRQE---FIDGILASKFPTTKLEMTAVADIFDRDGDGYIDYY 5644
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5645 EFVAALH 5651
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ + T+ E ++ D DGDG I
Sbjct: 5086 SRVMDFFRRIDKDQDGKITRQE---FIDGILASKFPTTKLEMTAVADIFDRDGDGYIDYY 5142
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5143 EFVAALH 5149
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 37.0 bits (84), Expect = 0.003
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 27 PQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSL 86
P+ +T+G+ + +++D F+ D + G + EL+ +Q+ LT E +
Sbjct: 95 PKLLAETAGM--IGVQEMRDAFKEFDTNGDGEITLVELQQAMQRLLG--ERLTPREISEV 150
Query: 87 MAAADNDGDGKIGAEEFQEMV 107
+ AD +GDG + EEF +M+
Sbjct: 151 VREADVNGDGTVDFEEFVKMM 171
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ S + E ++ D DGDG I
Sbjct: 5143 SRVMDFFRRIDKDQDGKITRQE---FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYY 5199
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5200 EFVAALH 5206
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ S + E ++ D DGDG I
Sbjct: 5154 SRVMDFFRRIDKDQDGKITRQE---FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYY 5210
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5211 EFVAALH 5217
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ S + E ++ D DGDG I
Sbjct: 5292 SRVMDFFRRIDKDQDGKITRQE---FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYY 5348
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5349 EFVAALH 5355
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ S + E ++ D DGDG I
Sbjct: 5114 SRVMDFFRRIDKDQDGKITRQE---FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYY 5170
Query: 102 EFQEMVH 108
EF +H
Sbjct: 5171 EFVAALH 5177
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 42 SQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
S+V D FR ID DQ G + +E F+ S + E ++ D DGDG I
Sbjct: 4788 SRVMDFFRRIDKDQDGKITRQE---FIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYY 4844
Query: 102 EFQEMVH 108
EF +H
Sbjct: 4845 EFVAALH 4851
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 36 LSKMSASQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGD 95
LS+ ++KD F D D+ +D ELK ++ ++ +++ ++ D +
Sbjct: 22 LSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRAL---GFDVKKADVLKILKDYDREAT 78
Query: 96 GKIGAEEFQEMV 107
GKI E+F E+V
Sbjct: 79 GKITFEDFNEVV 90
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTES----ETKSLMAAADNDGDGKI 98
++ F+ D+D SG K L+ AREL E+ E ++++ D DGDG+I
Sbjct: 102 EILKAFKLFDDDDSG-------KISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEI 154
Query: 99 GAEEF 103
EEF
Sbjct: 155 NQEEF 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,636,691
Number of Sequences: 37866
Number of extensions: 132278
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 525
Number of HSP's gapped (non-prelim): 269
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.