Guide to the Human Genome
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Name: TMBIM4 Sequence: fasta or formatted (238aa) NCBI GI: 116812579
Description:

transmembrane BAX inhibitor motif containing 4

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         19           3
 C cysteine            0.8          2           1
 D aspartate           3.4          8           2
 E glutamate           3.8          9           2
 F phenylalanine      10.1         24           3
 G glycine             4.2         10           1
 H histidine           2.5          6           1
 I isoleucine          6.7         16           2
 K lysine              3.8          9           2
 L leucine            18.9         45           2
 M methionine          1.7          4           1
 N asparagine          2.1          5           1
 P proline             2.5          6           1
 Q glutamine           1.3          3           1
 R arginine            2.9          7           1
 S serine              7.6         18           2
 T threonine           6.3         15           3
 V valine              7.6         18           3
 W tryptophan          0.4          1           1
 Y tyrosine            5.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane BAX inhibitor motif containing 4 [Hom... 
GRINA                 0.221   glutamate receptor, ionotropic, N-methyl D-aspartate...
GRINA                 0.221   glutamate receptor, ionotropic, N-methyl D-aspartate...
FAIM2                 0.194   Fas apoptotic inhibitory molecule 2 
TMBIM1                0.194   transmembrane BAX inhibitor motif containing 1 [Homo...
TMBIM6                0.091   testis enhanced gene transcript (BAX inhibitor 1) i...
TMBIM6                0.091   testis enhanced gene transcript (BAX inhibitor 1) i...
RHBG                  0.018   Rhesus blood group, B glycoprotein 
GHITM                 0.016   growth hormone inducible transmembrane protein [Hom...
SLC36A3               0.014   solute carrier family 36, member 3 isoform 1 
SLC36A3               0.014   solute carrier family 36, member 3 isoform 2 
LOC100294023          0.014   PREDICTED: hypothetical protein 
LOC100290508          0.014   PREDICTED: hypothetical protein XP_002346946 
LOC100289187          0.014   PREDICTED: hypothetical protein XP_002342783 
LOC100289187          0.014   PREDICTED: hypothetical protein 
CHRM4                 0.011   cholinergic receptor, muscarinic 4 
OR2W3                 0.009   olfactory receptor, family 2, subfamily W, member 3 ...
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
CHRM2                 0.009   cholinergic receptor, muscarinic 2 
TMEM184A              0.009   transmembrane protein 184A 
TMEM206               0.009   transmembrane protein 206 
LMF2                  0.009   lipase maturation factor 2 
ADRA1A                0.007   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.007   alpha-1A-adrenergic receptor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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