Guide to the Human Genome
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Name: TMEM184B Sequence: fasta or formatted (407aa) NCBI GI: 63259329
Description:

transmembrane protein 184B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         34           3
 C cysteine            3.2         13           2
 D aspartate           3.9         16           2
 E glutamate           3.9         16           1
 F phenylalanine       6.6         27           2
 G glycine             5.9         24           2
 H histidine           2.0          8           1
 I isoleucine          6.1         25           2
 K lysine              3.4         14           1
 L leucine             9.8         40           3
 M methionine          2.9         12           1
 N asparagine          1.7          7           1
 P proline             4.7         19           1
 Q glutamine           3.9         16           2
 R arginine            3.9         16           1
 S serine              9.3         38           3
 T threonine           5.9         24           2
 V valine              6.9         28           2
 W tryptophan          1.2          5           1
 Y tyrosine            6.1         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 184B 
TMEM184A              0.618   transmembrane protein 184A 
TMEM184C              0.200   transmembrane protein 184C 
SCMH1                 0.009   sex comb on midleg 1 isoform 1 
SCMH1                 0.009   sex comb on midleg 1 isoform 2 
SLC29A1               0.007   equilibrative nucleoside transporter 1 
SLC29A1               0.007   equilibrative nucleoside transporter 1 
SLC29A1               0.007   equilibrative nucleoside transporter 1 
SLC29A1               0.007   equilibrative nucleoside transporter 1 
SLC29A1               0.007   equilibrative nucleoside transporter 1 
LOC647546             0.007   PREDICTED: hypothetical protein 
LOC100291737          0.005   PREDICTED: hypothetical protein XP_002345024 
LOC100290757          0.005   PREDICTED: hypothetical protein XP_002347750 
LOC100289291          0.005   PREDICTED: hypothetical protein XP_002343521 
FOXK1                 0.005   forkhead box K1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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