WDR40A 14387

Name: WDR40A	Sequence: fasta or formatted (453aa)		NCBI GI: 22218619
Description: WD repeat domain 40A		Referenced in: WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 29 2 C cysteine 2.2 10 1 D aspartate 5.3 24 2 E glutamate 4.0 18 2 F phenylalanine 3.3 15 2 G glycine 8.2 37 2 H histidine 3.5 16 1 I isoleucine 3.5 16 2 K lysine 6.2 28 1 L leucine 9.9 45 2 M methionine 0.7 3 1 N asparagine 4.9 22 2 P proline 4.9 22 2 Q glutamine 3.3 15 2 R arginine 6.2 28 1 S serine 8.8 40 2 T threonine 5.3 24 2 V valine 7.3 33 2 W tryptophan 2.2 10 1 Y tyrosine 4.0 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 40A DCAF12L2 0.618 DDB1 and CUL4 associated factor 12-like 2 WDR40B 0.580 WD repeat domain 40B TBL1Y 0.019 transducin beta-like 1Y TBL1Y 0.019 transducin beta-like 1Y TBL1Y 0.019 transducin beta-like 1Y TEP1 0.019 telomerase-associated protein 1 TBL1XR1 0.018 transducin (beta)-like 1 X-linked receptor 1 TBL1X 0.016 transducin beta-like 1X isoform b TBL1X 0.016 transducin beta-like 1X isoform b TBL1X 0.016 transducin beta-like 1X isoform a TBL1X 0.016 transducin beta-like 1X isoform a CSTF1 0.013 cleavage stimulation factor subunit 1 CSTF1 0.013 cleavage stimulation factor subunit 1 CSTF1 0.013 cleavage stimulation factor subunit 1 WDR17 0.012 WD repeat domain 17 isoform 2 WDR17 0.012 WD repeat domain 17 isoform 1 GNB1L 0.010 guanine nucleotide binding protein beta-subunit-like... WDR37 0.010 WD repeat domain 37 RBBP4 0.010 retinoblastoma binding protein 4 isoform c RBBP4 0.010 retinoblastoma binding protein 4 isoform b RBBP4 0.010 retinoblastoma binding protein 4 isoform a WDR5 0.010 WD repeat domain 5 WDR5 0.010 WD repeat domain 5 GNB2 0.009 guanine nucleotide-binding protein, beta-2 subunit [... GNB1 0.009 guanine nucleotide-binding protein, beta-1 subunit [... RBBP7 0.009 retinoblastoma binding protein 7 NLE1 0.009 Notchless gene homolog isoform a GNB4 0.008 guanine nucleotide-binding protein, beta-4 subunit [... GNB2L1 0.008 guanine nucleotide binding protein (G protein), beta ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.