Guide to the Human Genome
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Name: TMEM184C Sequence: fasta or formatted (438aa) NCBI GI: 190358512
Description:

transmembrane protein 184C

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         24           2
 C cysteine            3.2         14           3
 D aspartate           3.9         17           2
 E glutamate           5.5         24           2
 F phenylalanine       4.8         21           1
 G glycine             4.1         18           1
 H histidine           2.7         12           2
 I isoleucine          8.4         37           2
 K lysine              4.6         20           2
 L leucine            10.5         46           3
 M methionine          2.3         10           1
 N asparagine          2.3         10           2
 P proline             5.7         25           2
 Q glutamine           4.6         20           2
 R arginine            3.0         13           1
 S serine              6.6         29           4
 T threonine           5.7         25           2
 V valine              9.1         40           2
 W tryptophan          3.2         14           1
 Y tyrosine            4.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 184C 
TMEM184B              0.183   transmembrane protein 184B 
TMEM184A              0.178   transmembrane protein 184A 
OSTalpha              0.022   organic solute transporter alpha 
MSH4                  0.007   mutS homolog 4 
OR56A1                0.006   olfactory receptor, family 56, subfamily A, member 1...
CHUK                  0.006   conserved helix-loop-helix ubiquitous kinase 
GDPD5                 0.006   glycerophosphodiester phosphodiesterase domain cont...
OR56A4                0.006   olfactory receptor, family 56, subfamily A, member 4...
TLCD1                 0.006   TLC domain containing 1 isoform 1 
AHI1                  0.006   Abelson helper integration site 1 isoform b 
AHI1                  0.006   Abelson helper integration site 1 isoform a 
AHI1                  0.006   Abelson helper integration site 1 isoform a 
AHI1                  0.006   Abelson helper integration site 1 isoform a 
GPR68                 0.006   G protein-coupled receptor 68 
C2orf71               0.006   hypothetical protein LOC388939 
DDX21                 0.006   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
OR56A5                0.005   olfactory receptor, family 56, subfamily A, member ...
OR56A5                0.005   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                0.005   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                0.005   PREDICTED: olfactory receptor, family 56, subfamily...
PANX2                 0.005   pannexin 2 isoform 1 
PANX2                 0.005   pannexin 2 isoform 2 
CCNT2                 0.005   cyclin T2 isoform b 
C9orf5                0.005   hypothetical protein LOC23731 
CACNA1C               0.005   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.005   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.005   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.005   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.005   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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