Search of human proteins with 145580580

Search of human proteins with 145580580

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|145580580 ubiquilin-like [Homo sapiens]
         (475 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|145580580 ubiquilin-like [Homo sapiens]                            949   0.0  
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]                      223   4e-58
gi|16753207 ubiquilin 2 [Homo sapiens]                                216   3e-56
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]                      189   6e-48
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa...   187   2e-47
gi|8567418 ubiquilin 3 [Homo sapiens]                                 149   7e-36
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]    43   5e-04
gi|67010025 Sp4 transcription factor [Homo sapiens]                    42   0.002
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]    41   0.003
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]     41   0.003
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]     41   0.003
gi|221139761 zinc finger protein 853 [Homo sapiens]                    40   0.004
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho...    37   0.051
gi|48717485 DDI1, DNA-damage inducible 1, homolog 1 [Homo sapiens]     37   0.051
gi|120952764 mastermind-like domain containing 1 [Homo sapiens]        36   0.067
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       34   0.25 
gi|13324688 bromodomain and WD repeat domain containing 2 [Homo ...    34   0.25 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    34   0.33 
gi|117676384 splicing factor, arginine/serine-rich 2, interactin...    33   0.43 
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    33   0.43 
gi|16975496 cortactin binding protein 2 [Homo sapiens]                 33   0.43 
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ...    33   0.74 
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s...    33   0.74 
gi|209977097 tripartite motif-containing 66 [Homo sapiens]             33   0.74 
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]     33   0.74 
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]     33   0.74 
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]     33   0.74 
gi|5032187 transducer of ERBB2, 1 [Homo sapiens]                       32   0.96 
gi|148612857 sickle tail isoform 3 [Homo sapiens]                      32   0.96 
gi|148612813 sickle tail isoform 2 [Homo sapiens]                      32   0.96 

>gi|145580580 ubiquilin-like [Homo sapiens]
          Length = 475

 Score =  949 bits (2453), Expect = 0.0
 Identities = 475/475 (100%), Positives = 475/475 (100%)

Query: 1   MWHAISRTSRMSQSGCPSGLLADKNISSSATRVIVKTAGNQKDFMVADDISVRQFKEMLL 60
           MWHAISRTSRMSQSGCPSGLLADKNISSSATRVIVKTAGNQKDFMVADDISVRQFKEMLL
Sbjct: 1   MWHAISRTSRMSQSGCPSGLLADKNISSSATRVIVKTAGNQKDFMVADDISVRQFKEMLL 60

Query: 61  AHFQCQMDQLVLVFMGCLLKDHDTLSQRGIMDGHTIYLVIKSKQGSRSLAHSFRDLPTND 120
           AHFQCQMDQLVLVFMGCLLKDHDTLSQRGIMDGHTIYLVIKSKQGSRSLAHSFRDLPTND
Sbjct: 61  AHFQCQMDQLVLVFMGCLLKDHDTLSQRGIMDGHTIYLVIKSKQGSRSLAHSFRDLPTND 120

Query: 121 PCHRDRNTKGNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQMLENPS 180
           PCHRDRNTKGNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQMLENPS
Sbjct: 121 PCHRDRNTKGNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQMLENPS 180

Query: 181 IQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQ 240
           IQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQ
Sbjct: 181 IQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQ 240

Query: 241 IQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAG 300
           IQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAG
Sbjct: 241 IQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAG 300

Query: 301 QVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANT 360
           QVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANT
Sbjct: 301 QVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANT 360

Query: 361 AMISTKGQSHICATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQ 420
           AMISTKGQSHICATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQ
Sbjct: 361 AMISTKGQSHICATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQ 420

Query: 421 SSSQITGGMMQLLMNNPYLAAQIMLFTSMPQLSEQWRQQLPTFLQQTQISDLLSA 475
           SSSQITGGMMQLLMNNPYLAAQIMLFTSMPQLSEQWRQQLPTFLQQTQISDLLSA
Sbjct: 421 SSSQITGGMMQLLMNNPYLAAQIMLFTSMPQLSEQWRQQLPTFLQQTQISDLLSA 475


>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
          Length = 589

 Score =  223 bits (567), Expect = 4e-58
 Identities = 165/458 (36%), Positives = 236/458 (51%), Gaps = 56/458 (12%)

Query: 32  RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           +V VKT   +++F V ++ SV+QFKE +   F+   DQLVL+F G +LKD DTLSQ GI 
Sbjct: 38  KVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIH 97

Query: 92  DGHTIYLVIKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPTGMNQAPVELAHF 151
           DG T++LVIK++  +R   HS +   T        +T  ++S     T        L   
Sbjct: 98  DGLTVHLVIKTQ--NRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGL 155

Query: 152 VGSDAPKVHTQNLE----------VSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDT 201
            G  +  ++T N            +S+PE   Q++ENP +Q +LSN + M Q I  +   
Sbjct: 156 AGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQM 215

Query: 202 QQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLE 261
           QQL+Q+NPE+S  +L+N +I+ QTLELARN AM+QE+M+ Q  + +            LE
Sbjct: 216 QQLIQRNPEISH-MLNNPDIMRQTLELARNPAMMQEMMRNQDRALS-----------NLE 263

Query: 262 TMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQD 321
           ++PGG NAL + Y DI + ML++ Q+ FGGNPF +L++        S     P   E +D
Sbjct: 264 SIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVS-----NTSSGEGSQPSRTENRD 318

Query: 322 QLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHICATRQPAWIP 381
            L    A +   +SS       +++ T + V  T+ +  +   T GQS    T  P  +P
Sbjct: 319 PLPNPWAPQTSQSSS-------ASSGTASTVGGTTGSTAS--GTSGQS----TTAPNLVP 365

Query: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 441
            + +              T  + S  Q +  + QL     S+     MMQ L  NP LAA
Sbjct: 366 GVGASMFN----------TPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA 415

Query: 442 QIM----LFTSMPQLSEQWRQQLPTFLQQTQISDLLSA 475
           Q+M    LF   PQL EQ RQQLPTFLQQ Q  D LSA
Sbjct: 416 QMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSA 453


>gi|16753207 ubiquilin 2 [Homo sapiens]
          Length = 624

 Score =  216 bits (551), Expect = 3e-56
 Identities = 168/467 (35%), Positives = 232/467 (49%), Gaps = 78/467 (16%)

Query: 32  RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           +V VKT   +++F V ++ SV+QFKE +   F+ Q DQLVL+F G +LKD DTL Q GI 
Sbjct: 34  KVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFAGKILKDQDTLIQHGIH 93

Query: 92  DGHTIYLVIKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQ-PTGMNQAPVELAH 150
           DG T++LVIKS+   +  +      P+N        T  ++ R +  P   N  P  L  
Sbjct: 94  DGLTVHLVIKSQNRPQGQSTQ----PSN--AAGTNTTSASTPRSNSTPISTNSNPFGLGS 147

Query: 151 FVG--------------SDAPKVHTQNLEVSHPECKAQMLENPSIQRLLSNMEFMWQFIS 196
             G              S+      Q L  S PE   Q++ENP +Q +LSN + M Q I 
Sbjct: 148 LGGLAGLSSLGLSSTNFSELQSQMQQQLMAS-PEMMIQIMENPFVQSMLSNPDLMRQLIM 206

Query: 197 EHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQP 256
            +   QQL+Q+NPE+S  LL+N +I+ QTLE+ARN AM+QE+M+ Q  + +         
Sbjct: 207 ANPQMQQLIQRNPEISH-LLNNPDIMRQTLEIARNPAMMQEMMRNQDLALS--------- 256

Query: 257 YLGLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTAL----LAGQVLEQVQSSPPP 312
              LE++PGG NAL + Y DI + MLN+ Q+ FGGNPF ++     +G+  +  ++    
Sbjct: 257 --NLESIPGGYNALRRMYTDIQEPMLNAAQEQFGGNPFASVGSSSSSGEGTQPSRTENRD 314

Query: 313 PPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHIC 372
           P P+       TQ  AT     S+G  S N+S+N T N V   +    ++ ST G     
Sbjct: 315 PLPNPWAPPPATQSSATTSTTTSTGSGSGNSSSNATGNTVAAANYV-ASIFSTPGMQ--- 370

Query: 373 ATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQL 432
                          L QQ+ E                  + QL     S+     MMQ 
Sbjct: 371 --------------SLLQQITE------------------NPQLIQNMLSAPYMRSMMQS 398

Query: 433 LMNNPYLAAQIM----LFTSMPQLSEQWRQQLPTFLQQTQISDLLSA 475
           L  NP LAAQ+M    LFT+ PQL EQ R QLP FLQQ Q  D LSA
Sbjct: 399 LSQNPDLAAQMMLNSPLFTANPQLQEQMRPQLPAFLQQMQNPDTLSA 445



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 16/91 (17%)

Query: 174 QMLENPS-IQRLLSN--MEFMWQFISEHLD-------TQQLMQQNPEVSRLLLDNSEILL 223
           Q+ ENP  IQ +LS   M  M Q +S++ D          L   NP++   +       L
Sbjct: 375 QITENPQLIQNMLSAPYMRSMMQSLSQNPDLAAQMMLNSPLFTANPQLQEQMRPQLPAFL 434

Query: 224 Q------TLELARNLAMIQEIMQIQQPSQNL 248
           Q      TL    N   +Q +MQIQQ  Q L
Sbjct: 435 QQMQNPDTLSAMSNPRAMQALMQIQQGLQTL 465


>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
          Length = 561

 Score =  189 bits (479), Expect = 6e-48
 Identities = 146/445 (32%), Positives = 221/445 (49%), Gaps = 52/445 (11%)

Query: 32  RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           +V VKT   +++F V ++ SV+QFKE +   F+   DQLVL+F G +LKD DTLSQ GI 
Sbjct: 38  KVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIH 97

Query: 92  DGHTIYLVIKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPTGMNQAPVELAHF 151
           DG T++LVIK++  +R   HS +   T        +T  ++S     T        L   
Sbjct: 98  DGLTVHLVIKTQ--NRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGL 155

Query: 152 VGSDAPKVHTQNLE----------VSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDT 201
            G  +  ++T N            +S+PE   Q++ENP +Q +LSN + M Q I  +   
Sbjct: 156 AGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQM 215

Query: 202 QQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLE 261
           QQL+Q+NPE+S  +L+N +I+ QTLELARN AM+QE+M+ Q  + +            LE
Sbjct: 216 QQLIQRNPEISH-MLNNPDIMRQTLELARNPAMMQEMMRNQDRALS-----------NLE 263

Query: 262 TMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQD 321
           ++PGG NAL + Y DI + ML++ Q+ FGGNPF +L++        S     P   E +D
Sbjct: 264 SIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVS-----NTSSGEGSQPSRTENRD 318

Query: 322 QLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHICATRQPAWIP 381
            L    A +   +SS       +++ T + V  T+ +  +   T GQS    T  P  +P
Sbjct: 319 PLPNPWAPQTSQSSS-------ASSGTASTVGGTTGSTAS--GTSGQS----TTAPNLVP 365

Query: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 441
            + +              T  + S  Q +  + QL     S+     MMQ L  NP LAA
Sbjct: 366 GVGASMFN----------TPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAA 415

Query: 442 QIMLFTSMPQLSEQWRQQLPTFLQQ 466
           Q+    ++  +S     Q    +QQ
Sbjct: 416 QMQNPDTLSAMSNPRAMQALLQIQQ 440


>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
           sapiens]
          Length = 601

 Score =  187 bits (474), Expect = 2e-47
 Identities = 149/489 (30%), Positives = 223/489 (45%), Gaps = 90/489 (18%)

Query: 32  RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           RV VKT  ++++ ++ D  SV++FKE +   F+ Q DQLVL+F G +LKD DTL+Q GI 
Sbjct: 14  RVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKILKDGDTLNQHGIK 73

Query: 92  DGHTIYLVIKSKQGSRSLAHSFRDLP-TNDPCHRDRNTKGNSSRVHQPTGMNQAPVEL-- 148
           DG T++LVIK+ Q ++  A +    P T DP      T  + +   QP+    A  +   
Sbjct: 74  DGLTVHLVIKTPQKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGS 133

Query: 149 ----------AHFVGSDAPKV-----------------------------HTQNLEVSHP 169
                     +   G  +P                                 Q   +S+P
Sbjct: 134 GSRRSSGGGPSPGAGEGSPSATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNP 193

Query: 170 ECKAQMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELA 229
           E  +Q++ENP +Q ++SN + M   I  +   QQLM++NPE+S  +L+N E++ QT+ELA
Sbjct: 194 EMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISH-MLNNPELMRQTMELA 252

Query: 230 RNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPF 289
           RN AM+QE+M+ Q  + +            LE++PGG NAL + Y DI + M ++ ++ F
Sbjct: 253 RNPAMMQEMMRNQDRALS-----------NLESIPGGYNALRRMYTDIQEPMFSAAREQF 301

Query: 290 GGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTL 349
           G NPF++L      +   S P      +   +  +  P T     S G  +  +  +   
Sbjct: 302 GNNPFSSLAGNS--DSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVH 359

Query: 350 NKVNHTSKANTAMISTKGQSHICATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQT 409
             V++    N A +   G     +    A         L QQ+ E               
Sbjct: 360 PTVSNPFGINAASL---GSGMFNSPEMQA---------LLQQISE--------------- 392

Query: 410 LKGDLQLSDEQSSSQITGGMMQLLMNNPYLAAQIM----LFTSMPQLSEQWRQQLPTFLQ 465
              + QL     S+     MMQ L  NP  AAQ+M    LF   PQL EQ R QLP FLQ
Sbjct: 393 ---NPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQ 449

Query: 466 QTQISDLLS 474
           Q Q  + LS
Sbjct: 450 QMQNPESLS 458


>gi|8567418 ubiquilin 3 [Homo sapiens]
          Length = 655

 Score =  149 bits (375), Expect = 7e-36
 Identities = 98/271 (36%), Positives = 146/271 (53%), Gaps = 23/271 (8%)

Query: 32  RVIVKTAGNQKDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           +V VKT  +++DF V D  +++Q KE +   F+   DQLVL+F G +LKD D+L+Q G+ 
Sbjct: 23  KVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVR 82

Query: 92  DGHTIYLVIKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQP--------TGMNQ 143
           DG T++LVIK +  +         +PT  P         +      P        TG+++
Sbjct: 83  DGLTVHLVIKRQHRAMGNECPAASVPTQGPSPGSLPQPSSIYPADGPPAFSLGLLTGLSR 142

Query: 144 APVELAHFVGSDAPKVHTQNLEVSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDTQQ 203
             + LA+    D P        VS PE   Q++++P I  LLSN   + Q + ++   QQ
Sbjct: 143 --LGLAYRGFPDQPS-SLMRQHVSVPEFVTQLIDDPFIPGLLSNTGLVRQLVLDNPHMQQ 199

Query: 204 LMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLETM 263
           L+Q NPE+   +L+N EI+ QTLE  RN AM+QE+++ Q            +    LE++
Sbjct: 200 LIQHNPEIGH-ILNNPEIMRQTLEFLRNPAMMQEMIRSQD-----------RVLSNLESI 247

Query: 264 PGGNNALGQNYADINDQMLNSMQDPFGGNPF 294
           PGG N L   Y DI D MLN++Q+ FGGNPF
Sbjct: 248 PGGYNVLCTMYTDIMDPMLNAVQEQFGGNPF 278


>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
          Length = 1132

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 36/249 (14%)

Query: 33  VIVKTAGNQ-KDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           V+VKT  +Q + F+V   ++V++FKE + A      ++  L++ G +L+D   L +  + 
Sbjct: 19  VLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV- 77

Query: 92  DGHTIYLV------------IKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPT 139
            G  I+LV              S  GS S  H     P          T+G  + VH   
Sbjct: 78  GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPP---------GTRGPGASVHDRN 128

Query: 140 GMNQAPVELAHFVG-SDAPKVHTQNLE----VSHPECKAQMLEN--PSIQRLLSNMEFMW 192
             +   V   +      A  VH  N+E     S P  +  M ++    IQ LLS ME + 
Sbjct: 129 ANSYVMVGTFNLPSDGSAVDVHI-NMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLP 187

Query: 193 QFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQ-----PSQN 247
                     Q  Q  P+   +  +   +  QT E   + A  +E M+ ++     P+QN
Sbjct: 188 YLQCRGGPQPQHSQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQN 247

Query: 248 LEYPLNPQP 256
            E    P P
Sbjct: 248 PELTPGPAP 256


>gi|67010025 Sp4 transcription factor [Homo sapiens]
          Length = 784

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 27/197 (13%)

Query: 264 PGGNNALGQNYA--DINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQD 321
           PG N A GQ     D +  ++     P      T  LAG   + V S+PP    +   Q 
Sbjct: 61  PGENQATGQQQIIIDPSQGLVQLQNQPQQLELVTTQLAGNAWQLVASTPPASKENNVSQ- 119

Query: 322 QLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHICATRQPAWIP 381
                PA+    +SS   S+N SA+ T  K  ++S        T GQ  +   + P+   
Sbjct: 120 -----PASS---SSSSSSSNNGSASPTKTKSGNSS--------TPGQFQVIQVQNPSGSV 163

Query: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQI--------TGGMMQLL 433
               I   Q ++ +      + SSS Q L+G +QL    ++  I        +G ++   
Sbjct: 164 QYQVIPQLQTVEGQQIQINPTSSSSLQDLQGQIQLISAGNNQAILTAANRTASGNILAQN 223

Query: 434 MNNPYLAAQIMLFTSMP 450
           + N  +  QI    S+P
Sbjct: 224 LANQTVPVQIRPGVSIP 240


>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 42/249 (16%)

Query: 33  VIVKTAGNQ-KDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           V+VKT  +Q + F+V   ++V++FKE + A      ++  L++ G +L+D   L +  + 
Sbjct: 19  VLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV- 77

Query: 92  DGHTIYLV------------IKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPT 139
            G  I+LV              S  GS S  H     P          T+G  + VH   
Sbjct: 78  GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPP---------GTRGPGASVHDRN 128

Query: 140 GMNQAPVELAHFVG-SDAPKVHTQNLE----VSHPECKAQMLEN--PSIQRLLSNMEFMW 192
             +   V   +      A  VH  N+E     S P  +  M ++    IQ LLS ME   
Sbjct: 129 ANSYVMVGTFNLPSDGSAVDVHI-NMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRG 187

Query: 193 QFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQ-----PSQN 247
               +H       Q  P+   +  +   +  QT E   + A  +E M+ ++     P+QN
Sbjct: 188 GPQPQH------SQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQN 241

Query: 248 LEYPLNPQP 256
            E    P P
Sbjct: 242 PELTPGPAP 250


>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 42/249 (16%)

Query: 33  VIVKTAGNQ-KDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           V+VKT  +Q + F+V   ++V++FKE + A      ++  L++ G +L+D   L +  + 
Sbjct: 19  VLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV- 77

Query: 92  DGHTIYLV------------IKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPT 139
            G  I+LV              S  GS S  H     P          T+G  + VH   
Sbjct: 78  GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPP---------GTRGPGASVHDRN 128

Query: 140 GMNQAPVELAHFVG-SDAPKVHTQNLE----VSHPECKAQMLEN--PSIQRLLSNMEFMW 192
             +   V   +      A  VH  N+E     S P  +  M ++    IQ LLS ME   
Sbjct: 129 ANSYVMVGTFNLPSDGSAVDVHI-NMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRG 187

Query: 193 QFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQ-----PSQN 247
               +H       Q  P+   +  +   +  QT E   + A  +E M+ ++     P+QN
Sbjct: 188 GPQPQH------SQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQN 241

Query: 248 LEYPLNPQP 256
            E    P P
Sbjct: 242 PELTPGPAP 250


>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
          Length = 1126

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 42/249 (16%)

Query: 33  VIVKTAGNQ-KDFMVADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLLKDHDTLSQRGIM 91
           V+VKT  +Q + F+V   ++V++FKE + A      ++  L++ G +L+D   L +  + 
Sbjct: 19  VLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNV- 77

Query: 92  DGHTIYLV------------IKSKQGSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPT 139
            G  I+LV              S  GS S  H     P          T+G  + VH   
Sbjct: 78  GGKVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPP---------GTRGPGASVHDRN 128

Query: 140 GMNQAPVELAHFVG-SDAPKVHTQNLE----VSHPECKAQMLEN--PSIQRLLSNMEFMW 192
             +   V   +      A  VH  N+E     S P  +  M ++    IQ LLS ME   
Sbjct: 129 ANSYVMVGTFNLPSDGSAVDVHI-NMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRG 187

Query: 193 QFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQ-----PSQN 247
               +H       Q  P+   +  +   +  QT E   + A  +E M+ ++     P+QN
Sbjct: 188 GPQPQH------SQPPPQPPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQN 241

Query: 248 LEYPLNPQP 256
            E    P P
Sbjct: 242 PELTPGPAP 250


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 21/181 (11%)

Query: 164 LEVSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILL 223
           L++ H + + Q  +    QRL    E   Q  ++    QQ++QQ  ++ + + +  ++L 
Sbjct: 150 LQLMHQQQQLQPQQVQEQQRLQQQQE---QLQTQQAQEQQVLQQQEQLQQQVQEQ-QLLQ 205

Query: 224 QTLELARNLAMIQEIMQIQQPS-QNLEYPLNPQPYLGLETMPGG--------------NN 268
           Q  E  +   ++Q+  Q+QQ   Q  +  L  Q  L L    G                 
Sbjct: 206 QQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQ 265

Query: 269 ALGQNYADINDQMLNSMQDPFGGNPFTALLAGQV--LEQVQSSPPPPPPSQEQQDQLTQH 326
            L Q  A +  Q+L   Q+         LL  Q   L+Q Q  PPP  P +E++ +L   
Sbjct: 266 LLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELM 325

Query: 327 P 327
           P
Sbjct: 326 P 326



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 45/216 (20%), Positives = 72/216 (33%), Gaps = 20/216 (9%)

Query: 259 GLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTA------LLAGQVLEQVQSSPPP 312
           G +T+ GG+        +   +  +S Q P    P  A         GQ   Q+Q     
Sbjct: 38  GPDTLSGGSGGSESQEEEEPQERNSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQ 97

Query: 313 PPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKGQSHIC 372
           P P Q+ Q +  Q P   +              +  L +  H S  +  +       H  
Sbjct: 98  PEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQ-LQQEKHQSVHHQELKPELQLMHQQ 156

Query: 373 ATRQPAWIPALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQL 432
              QP        ++  Q+LQ++ +      +  +Q L+   QL  +    Q+     + 
Sbjct: 157 QQLQPQ------QVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQ 210

Query: 433 LMNNPYLAAQIMLFTSMPQLSEQWRQQLPTFLQQTQ 468
           L     L  Q        QL +Q  QQ    LQQ Q
Sbjct: 211 LQQQQLLQQQ-------EQLQQQQFQQQQEQLQQQQ 239


>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
            sapiens]
          Length = 3549

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 27/187 (14%)

Query: 245  SQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLE 304
            S  +E+PL P P L +   P  N  L      ++ + + +  + F G P       +  E
Sbjct: 2303 SSEIEFPLPPPPPLMM--FPEKNGFL----PSLSTEKIKAEFESFPGLPLPPPPVDEKSE 2356

Query: 305  QVQSS---PPPPPPSQEQQD-QLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANT 360
            +  SS   PPPPPP+  Q+   L    A       SG F    S  +  N  N  +K  T
Sbjct: 2357 RESSSMFLPPPPPPTPSQKPAHLLSSSAPE---KHSGDFMQQYSQKEASNSQNSQAKIIT 2413

Query: 361  AMISTKGQSHICATRQPAWIPALPSIELTQQLQEEYKDAT--VSLSSSRQTLKGDLQLSD 418
                  G++ +         P LP  +L + +++   D +  V L++S   ++  +  S 
Sbjct: 2414 ------GKTGVLPP------PTLPKPKLPKHIKDNKNDFSPKVELATSLSDMECKITTSK 2461

Query: 419  EQSSSQI 425
            +Q    +
Sbjct: 2462 DQKKVMV 2468


>gi|48717485 DDI1, DNA-damage inducible 1, homolog 1 [Homo sapiens]
          Length = 396

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 21/175 (12%)

Query: 46  VADDISVRQFKEMLLAHFQCQMDQLVLVFMGCLL-KDHDTLSQRGIMDGHTIYLVIKSKQ 104
           V+ D  +R FK +  A  +  ++++ ++ M  LL +DH +L   G+ DG  + L+ K   
Sbjct: 21  VSPDFELRNFKVLCEAESRVPVEEIQIIHMERLLIEDHCSLGSYGLKDGDIVVLLQKDNV 80

Query: 105 GSRSLAHSFRDLPTNDPCHRDRNTKGNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNL 164
           G R+   +  + P  D         G SS   Q  G  Q     A           +Q L
Sbjct: 81  GPRAPGRA-PNQPRVD--FSGIAVPGTSSSRPQHPGQQQQRTPAAQ---------RSQGL 128

Query: 165 EVSHPECKAQMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNS 219
                    Q L +P++ R +         +S   D   L ++NP ++  LL  S
Sbjct: 129 ASGEKVAGLQGLGSPALIRSM--------LLSNPHDLSLLKERNPPLAEALLSGS 175


>gi|120952764 mastermind-like domain containing 1 [Homo sapiens]
          Length = 774

 Score = 36.2 bits (82), Expect = 0.067
 Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 12/161 (7%)

Query: 306 VQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMIS- 364
           ++S  P      +QQ Q  Q     VI+      SS T +      +  +S   T   + 
Sbjct: 480 IRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSSKTLSMIMQQGMASSSPGATEPFTF 539

Query: 365 --TKGQSHICATRQPAWIPALPSIE--------LTQQLQEEYKDATVSLSSSRQTLKGDL 414
             TK  SH  +   P  +P++P+          L Q    +   AT S S++  TL+   
Sbjct: 540 GNTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSATAS-STATATLQLQQ 598

Query: 415 QLSDEQSSSQITGGMMQLLMNNPYLAAQIMLFTSMPQLSEQ 455
           Q   +Q     +  ++Q +M  P    + +   SMP L  Q
Sbjct: 599 QQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQ 639


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 32/211 (15%)

Query: 136 HQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQML-ENPSIQRLLSNMEFMWQF 194
           HQP    Q P    +      P+  TQ L         QML   P ++ + + M      
Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP 358

Query: 195 ISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNP 254
           +   +  QQ   Q  + ++++    +++ +        A+ Q  M I+       +P   
Sbjct: 359 VQPQVQQQQTAVQTAQAAQMVAPGVQMITE--------ALAQGGMHIRA-----RFP--- 402

Query: 255 QPYLGLETMPGGNNALG-QNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPP 313
            P   +  +P  +  LG Q  A ++   L  +  P           GQ ++  QS PPPP
Sbjct: 403 -PTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPS---------PGQQVQTPQSMPPPP 452

Query: 314 PPSQEQQDQLTQHPATRVIYNSSGGFSSNTS 344
            PS  Q  Q +  P + V   SSG   S +S
Sbjct: 453 QPS-PQPGQPSSQPNSNV---SSGPAPSPSS 479



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 199 LDTQQLMQQNPEVSRLLLDNSEILLQTLEL-ARNLAMIQEIMQIQQPSQNLEYPLNPQPY 257
           L  QQ  QQ  +  +  L   +   Q  +  A+  AM Q+   + Q  Q L+     Q +
Sbjct: 160 LQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQQSAMQQQFQAVVQQQQQLQQQQQQQQH 219

Query: 258 L------GLETMPGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPP 311
           L        + +      L Q  A +  Q     Q         AL A   ++Q     P
Sbjct: 220 LIKLHHQNQQQIQQQQQQL-QRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQP 278

Query: 312 PPPPSQEQQDQLTQ 325
            PPPSQ    QL Q
Sbjct: 279 QPPPSQALPQQLQQ 292


>gi|13324688 bromodomain and WD repeat domain containing 2 [Homo
           sapiens]
          Length = 1224

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 227 ELARNLAMIQEIMQI--QQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQMLNS 284
           E+  +   IQ++  +  Q  S++L   ++P  Y+ L     G     ++YAD    +L+ 
Sbjct: 108 EIQEHAKPIQDVQWLWNQDASRDLLLAIHPPNYIVLWNADTGTKLWKKSYAD---NILSF 164

Query: 285 MQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTS 344
             DPF  +  T LL  + +  +    P  PPS   +      P +   +N     ++ T 
Sbjct: 165 SFDPFDPSHLT-LLTSEGIVFISDFSPSKPPSGPGKKVYISSPHSSPAHNK---LATATG 220

Query: 345 ANDTLNKV 352
           A   LNKV
Sbjct: 221 AKKALNKV 228


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
            sapiens]
          Length = 1362

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 302  VLEQVQSSPPPPPPSQEQQDQLTQH-PATRVIYNSSGGFSSN 342
            V +Q+Q  PPPPPP Q Q     QH P  R ++     FS++
Sbjct: 966  VQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTH 1007


>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
            protein [Homo sapiens]
          Length = 1463

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 48/209 (22%)

Query: 234  MIQEIMQIQQPSQNLEY-PLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDPFG-- 290
            M+Q  M + Q   N ++ P+N  PY      P G +A           ++N  ++PF   
Sbjct: 1207 MMQPQMNVMQQQMNAQHQPMNIFPY------PVGVHA----------PLMNIQRNPFNIH 1250

Query: 291  ---------GNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSS 341
                     G P   +     + Q    PPPPPP  +Q + +   P  + +         
Sbjct: 1251 PQLPLHLHTGVPLMQVATPTSVSQGLPPPPPPPPPSQQVNYIASQPDGKQLQGIPSSSHV 1310

Query: 342  NTSANDTLNKVNHTSKANTAMI------STKGQSHICATRQPAWIPALPSIELTQQLQEE 395
            + + +  +      +  NT M+      +T   SH  A+          +++L +     
Sbjct: 1311 SNNMSTPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASN--------AAVKLAE----- 1357

Query: 396  YKDATVSLSSSRQTLKGDLQLSDEQSSSQ 424
                +V++ +S  + K D +L  ++ ++Q
Sbjct: 1358 -SKVSVAVEASADSSKTDKKLQIQEKAAQ 1385


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)

Query: 173  AQMLENPSIQRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLDNSEILLQTLELARNL 232
            +++ ++P  QR  S  E  W+F       QQ+ Q++ + +++         Q LE  +N 
Sbjct: 1733 SELFKDPLKQRE-SEHEQEWKF------RQQMRQKSKQQAKIEAT------QKLEQVKNE 1779

Query: 233  AMIQEIMQI-----------QQPSQNLEYPLNPQPYLGLETMPGGNNALGQNYADINDQM 281
               Q+  Q              PS  ++ PL PQP         GN +  Q++     + 
Sbjct: 1780 QQQQQQQQFGSQHLLVQSGSDTPSSGIQSPLTPQP-------GNGNMSPAQSF----HKE 1828

Query: 282  LNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQ-EQQDQLTQ----HPATRVIYNSS 336
            L + Q P   +  T+  +  V  + Q+ PPPP PS+   QD L+Q     P +  +++  
Sbjct: 1829 LFTKQPP---STPTSTSSDDVFVKPQAPPPPPAPSRIPIQDSLSQAQTSQPPSPQVFSPG 1885

Query: 337  GGFSSNTSANDTLNKVNHTSK 357
               S   S  D   K+  T +
Sbjct: 1886 SSNSRPPSPMDPYAKMVGTPR 1906


>gi|16975496 cortactin binding protein 2 [Homo sapiens]
          Length = 1663

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 295 TALLAGQVLEQVQSSPPPPPPSQE--QQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKV 352
           T+L    V    + +PPP PP +    Q     HP  +VI +SS   +SNT A     KV
Sbjct: 527 TSLKTHGVARVDRGNPPPIPPKKPGLSQTPSPPHPQLKVIIDSSR--ASNTGA-----KV 579

Query: 353 NHTSKANTAMISTKGQSHICATRQP----AWIPALPSIELT 389
           ++ + A+T     +G   I     P      +P  PSI+LT
Sbjct: 580 DNKTVASTPSSLPQGNRVINEENLPKSSSPQLPPKPSIDLT 620


>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
            sapiens]
          Length = 1726

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 48/202 (23%), Positives = 74/202 (36%), Gaps = 43/202 (21%)

Query: 130  GNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQMLE--------NPSI 181
            GNS      T M Q P      + S  P +  Q  +   P+ +AQ+L+        NP++
Sbjct: 1077 GNSGAAQART-MQQPPQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPAL 1135

Query: 182  QRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLD-----NSEILLQTLELARNLAMIQ 236
                 N + M       L   QL  Q  ++ + +L      +  +  Q  ++AR +  +Q
Sbjct: 1136 LTSPINPQHMTML--NQLYQLQLAYQRLQIQQQMLQAQRNVSGSMRQQEQQVARTITNLQ 1193

Query: 237  EIMQIQQPSQNLEY--------PLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDP 288
            +  QIQQ  + L          P  P P+L L    G                  S  D 
Sbjct: 1194 Q--QIQQHQRQLAQALLVKQPPPPPPPPHLSLHPSAG-----------------KSAMDS 1234

Query: 289  FGGNPFTALLAGQVLEQVQSSP 310
            F  +P T  L     ++ QSSP
Sbjct: 1235 FPSHPQTPGLPDLQTKEQQSSP 1256


>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
            sapiens]
          Length = 1690

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 48/202 (23%), Positives = 74/202 (36%), Gaps = 43/202 (21%)

Query: 130  GNSSRVHQPTGMNQAPVELAHFVGSDAPKVHTQNLEVSHPECKAQMLE--------NPSI 181
            GNS      T M Q P      + S  P +  Q  +   P+ +AQ+L+        NP++
Sbjct: 1080 GNSGAAQART-MQQPPQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPAL 1138

Query: 182  QRLLSNMEFMWQFISEHLDTQQLMQQNPEVSRLLLD-----NSEILLQTLELARNLAMIQ 236
                 N + M       L   QL  Q  ++ + +L      +  +  Q  ++AR +  +Q
Sbjct: 1139 LTSPINPQHMTML--NQLYQLQLAYQRLQIQQQMLQAQRNVSGSMRQQEQQVARTITNLQ 1196

Query: 237  EIMQIQQPSQNLEY--------PLNPQPYLGLETMPGGNNALGQNYADINDQMLNSMQDP 288
            +  QIQQ  + L          P  P P+L L    G                  S  D 
Sbjct: 1197 Q--QIQQHQRQLAQALLVKQPPPPPPPPHLSLHPSAG-----------------KSAMDS 1237

Query: 289  FGGNPFTALLAGQVLEQVQSSP 310
            F  +P T  L     ++ QSSP
Sbjct: 1238 FPSHPQTPGLPDLQTKEQQSSP 1259


>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
          Length = 1216

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 59/263 (22%), Positives = 96/263 (36%), Gaps = 21/263 (7%)

Query: 196 SEHL-DTQQLMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNP 254
           S+HL  +Q      P  S+    N +I+    EL      ++ ++Q QQPS  L    +P
Sbjct: 485 SQHLASSQHESPPGPACSQ----NMDIMHHKFELEEMQKDLELLLQAQQPSLQLSQTKSP 540

Query: 255 QPYLGLETMPGGNNALGQNYADINDQ----MLNSMQDP---FGGNPFTALLAGQVLEQVQ 307
           Q     +T+ G  N + +  A +  Q     L +  +P    G  P   L         Q
Sbjct: 541 QHL--QQTIVGQINYIVRQPAPVQSQSQEETLQATDEPPASQGSKPALPLDKNTAAALPQ 598

Query: 308 SSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSANDTLNKVNHTSKANTAMISTKG 367
           +S    P S    D   QH +  V+   S   S    +N    +++ T          + 
Sbjct: 599 ASGEETPLSVPPVDSTIQHSSPNVVRKHSTSLSIMGFSNTLEMELSSTRLERPLEPQIQS 658

Query: 368 QSHICATRQPAWIPALPSI--ELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQI 425
            S++ A   P  +P+L S   ++   L      A  SL++S       L  S  QS   +
Sbjct: 659 VSNLTA-GAPQAVPSLLSAPPKMVSSLTSVQNQAMPSLTTSHLQTVPSLVHSTFQSMPNL 717

Query: 426 TG----GMMQLLMNNPYLAAQIM 444
                  M  L  ++P     +M
Sbjct: 718 ISDSPQAMASLASDHPQAGPSLM 740


>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
          Length = 1812

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 204 LMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLETM 263
           ++Q + +V ++L  ++  LL+  +   N A +QE+ +  +P +NL + +N  P       
Sbjct: 858 VVQSSSDV-QMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIP------- 909

Query: 264 PGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQL 323
                    N  +   Q ++++  P G    TAL   +VL  V     PPPP + QQ  L
Sbjct: 910 ---------NLIEYVKQNIDNLMTPEGVGLTTAL---RVLCNVAC---PPPPVEGQQKDL 954

Query: 324 TQHPATRVIYNSSG 337
             + A   ++++ G
Sbjct: 955 KWNLAVIQLFSAEG 968


>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
          Length = 1147

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 204 LMQQNPEVSRLLLDNSEILLQTLELARNLAMIQEIMQIQQPSQNLEYPLNPQPYLGLETM 263
           ++Q + +V ++L  ++  LL+  +   N A +QE+ +  +P +NL + +N  P       
Sbjct: 858 VVQSSSDV-QMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIP------- 909

Query: 264 PGGNNALGQNYADINDQMLNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQL 323
                    N  +   Q ++++  P G    TAL   +VL  V     PPPP + QQ  L
Sbjct: 910 ---------NLIEYVKQNIDNLMTPEGVGLTTAL---RVLCNVAC---PPPPVEGQQKDL 954

Query: 324 TQHPATRVIYNSSG 337
             + A   ++++ G
Sbjct: 955 KWNLAVIQLFSAEG 968


>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
          Length = 1035

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 12/16 (75%), Positives = 14/16 (87%)

Query: 309 SPPPPPPSQEQQDQLT 324
           +PPPPPP Q+QQ QLT
Sbjct: 595 TPPPPPPPQQQQQQLT 610


>gi|5032187 transducer of ERBB2, 1 [Homo sapiens]
          Length = 345

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 270 LGQNYADINDQM-LNSMQDPFGGNPFTALLAGQVLEQVQSSPPPPPPSQEQQDQLT---Q 325
           LG N  D+  Q  ++S      G    +    Q  +Q    PPPPPP Q+QQ Q T    
Sbjct: 209 LGLNVNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPPPQQQQQQKTSALS 268

Query: 326 HPATRVIYNSSGGFSSNTS 344
             A   I+ +  G  S+T+
Sbjct: 269 PNAKEFIFPNMQGQGSSTN 287


>gi|148612857 sickle tail isoform 3 [Homo sapiens]
          Length = 1309

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 21/106 (19%)

Query: 301  QVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSAN--DTLNKVNHTSKA 358
            Q LE++    PPPPP           P  R  Y    G ++  S +   T  K N T+KA
Sbjct: 1000 QDLEKLGGKSPPPPP-----------PPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKA 1048

Query: 359  NTAMISTKGQSHICATRQP------AWIPALPSIELTQQLQEEYKD 398
            ++       Q+   AT+ P      AW P+ P +  +    EE ++
Sbjct: 1049 SSEDAGPSPQTR--ATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE 1092


>gi|148612813 sickle tail isoform 2 [Homo sapiens]
          Length = 1264

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 21/106 (19%)

Query: 301  QVLEQVQSSPPPPPPSQEQQDQLTQHPATRVIYNSSGGFSSNTSAN--DTLNKVNHTSKA 358
            Q LE++    PPPPP           P  R  Y    G ++  S +   T  K N T+KA
Sbjct: 955  QDLEKLGGKSPPPPP-----------PPPRRSYLPGSGLTTTRSGDVVYTGRKENITAKA 1003

Query: 359  NTAMISTKGQSHICATRQP------AWIPALPSIELTQQLQEEYKD 398
            ++       Q+   AT+ P      AW P+ P +  +    EE ++
Sbjct: 1004 SSEDAGPSPQTR--ATKYPAEEPASAWTPSPPPVTTSSSKDEEEEE 1047


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.128    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,775,130
Number of Sequences: 37866
Number of extensions: 818412
Number of successful extensions: 6719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 6350
Number of HSP's gapped (non-prelim): 317
length of query: 475
length of database: 18,247,518
effective HSP length: 106
effective length of query: 369
effective length of database: 14,233,722
effective search space: 5252243418
effective search space used: 5252243418
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.