Guide to the Human Genome
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Name: BRWD2 Sequence: fasta or formatted (1224aa) NCBI GI: 13324688
Description:

bromodomain and WD repeat domain containing 2

Referenced in:

Bromodomain Family
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         91           3
 C cysteine            2.6         32           2
 D aspartate           5.3         65           2
 E glutamate           5.8         71           2
 F phenylalanine       3.1         38           2
 G glycine             4.9         60           1
 H histidine           2.5         31           2
 I isoleucine          5.0         61           2
 K lysine              5.7         70           2
 L leucine            12.4        152           4
 M methionine          1.6         20           1
 N asparagine          4.7         57           2
 P proline             4.6         56           2
 Q glutamine           3.9         48           1
 R arginine            4.7         58           2
 S serine              8.4        103           3
 T threonine           5.4         66           2
 V valine              7.3         89           3
 W tryptophan          1.9         23           1
 Y tyrosine            2.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bromodomain and WD repeat domain containing 2 
TBL1X                 0.007   transducin beta-like 1X isoform b 
TBL1X                 0.007   transducin beta-like 1X isoform b 
TBL1X                 0.007   transducin beta-like 1X isoform a 
TBL1X                 0.007   transducin beta-like 1X isoform a 
PRPF19                0.007   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
TBL1Y                 0.007   transducin beta-like 1Y 
TBL1Y                 0.007   transducin beta-like 1Y 
TBL1Y                 0.007   transducin beta-like 1Y 
TBL1XR1               0.007   transducin (beta)-like 1 X-linked receptor 1 
WDR12                 0.006   WD repeat domain 12 protein 
ELP2                  0.006   elongator protein 2 
PWP1                  0.006   periodic tryptophan protein 1 
KIF21B                0.006   kinesin family member 21B 
RFWD2                 0.005   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.005   ring finger and WD repeat domain 2 isoform d24 [Homo...
NLE1                  0.005   Notchless gene homolog isoform a 
BTRC                  0.005   beta-transducin repeat containing protein isoform 2 [...
BTRC                  0.005   beta-transducin repeat containing protein isoform 1 ...
FBXW11                0.005   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.005   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.005   F-box and WD repeat domain containing 11 isoform B [...
PRPF4                 0.005   PRP4 pre-mRNA processing factor 4 homolog 
TAF5L                 0.005   PCAF associated factor 65 beta isoform a 
PAK1IP1               0.005   PAK1 interacting protein 1 
FZR1                  0.005   Fzr1 protein isoform 1 
FZR1                  0.005   Fzr1 protein isoform 3 
FZR1                  0.005   Fzr1 protein isoform 2 
SEC31B                0.005   SEC31 homolog B 
WDR90                 0.005   WD repeat domain 90 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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