Guide to the Human Genome
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Name: MAMLD1 Sequence: fasta or formatted (774aa) NCBI GI: 120952764
Description:

mastermind-like domain containing 1

Referenced in:

Notch Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         54           2
 C cysteine            1.3         10           2
 D aspartate           2.5         19           2
 E glutamate           4.0         31           3
 F phenylalanine       2.5         19           1
 G glycine             5.4         42           2
 H histidine           2.6         20           2
 I isoleucine          2.5         19           1
 K lysine              4.3         33           2
 L leucine             9.2         71           3
 M methionine          3.5         27           2
 N asparagine          2.7         21           2
 P proline            13.3        103           6
 Q glutamine           9.9         77          11
 R arginine            2.8         22           2
 S serine             14.5        112           3
 T threonine           5.8         45           2
 V valine              3.9         30           2
 W tryptophan          1.0          8           1
 Y tyrosine            1.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mastermind-like domain containing 1 
MAML2                 0.053   mastermind-like 2 
RERE                  0.028   atrophin-1 like protein isoform b 
RERE                  0.028   atrophin-1 like protein isoform a 
RERE                  0.028   atrophin-1 like protein isoform a 
SRRM2                 0.027   splicing coactivator subunit SRm300 
ATN1                  0.027   atrophin-1 
ATN1                  0.027   atrophin-1 
EP400                 0.026   E1A binding protein p400 
MLL4                  0.026   myeloid/lymphoid or mixed-lineage leukemia 4 
BRD4                  0.025   bromodomain-containing protein 4 isoform long 
NACA                  0.025   nascent polypeptide-associated complex alpha subuni...
MAML3                 0.024   mastermind-like 3 
KDM6B                 0.023   lysine (K)-specific demethylase 6B 
CCNK                  0.023   cyclin K isoform 1 
SRCAP                 0.023   Snf2-related CBP activator protein 
PCLO                  0.023   piccolo isoform 2 
PCLO                  0.023   piccolo isoform 1 
SPEN                  0.022   spen homolog, transcriptional regulator 
CREBBP                0.022   CREB binding protein isoform b 
CREBBP                0.022   CREB binding protein isoform a 
BCL9                  0.022   B-cell CLL/lymphoma 9 
SFPQ                  0.022   splicing factor proline/glutamine rich (polypyrimidin...
MAGEC1                0.021   melanoma antigen family C, 1 
WASF2                 0.021   WAS protein family, member 2 
MED25                 0.021   mediator complex subunit 25 
RAPH1                 0.021   Ras association and pleckstrin homology domains 1 is...
NHSL1                 0.021   NHS-like 1 
MLL2                  0.021   myeloid/lymphoid or mixed-lineage leukemia 2 
EP300                 0.020   E1A binding protein p300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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