Guide to the Human Genome
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Name: PLA2G3 Sequence: fasta or formatted (509aa) NCBI GI: 142976884
Description:

phospholipase A2, group III precursor

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         41           2
 C cysteine            4.3         22           2
 D aspartate           3.5         18           1
 E glutamate           4.7         24           2
 F phenylalanine       3.3         17           2
 G glycine             8.4         43           3
 H histidine           3.5         18           1
 I isoleucine          2.2         11           1
 K lysine              3.1         16           2
 L leucine             9.8         50           2
 M methionine          1.4          7           1
 N asparagine          2.8         14           1
 P proline             8.1         41           2
 Q glutamine           7.7         39           2
 R arginine            9.2         47           2
 S serine              6.9         35           2
 T threonine           4.5         23           2
 V valine              3.5         18           1
 W tryptophan          2.9         15           2
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group III precursor 
PROCA1                0.030   protein interacting with cyclin A1 
PTCH1                 0.013   patched isoform S 
PTCH1                 0.013   patched isoform S 
PTCH1                 0.013   patched isoform S 
PTCH1                 0.013   patched isoform S 
PTCH1                 0.013   patched isoform L' 
PTCH1                 0.013   patched isoform M 
PTCH1                 0.013   patched isoform L 
COL4A4                0.011   alpha 4 type IV collagen precursor 
LOC100292133          0.009   PREDICTED: hypothetical protein 
LOC100294354          0.009   PREDICTED: hypothetical protein 
USP31                 0.009   ubiquitin specific peptidase 31 
LOC100292723          0.008   PREDICTED: hypothetical protein 
C16orf7               0.008   chromosome 16 open reading frame 7 
WDR33                 0.008   WD repeat domain 33 isoform 1 
LOC100290436          0.008   PREDICTED: hypothetical protein XP_002347616 
LOC100287267          0.008   PREDICTED: hypothetical protein XP_002343446 
PRB1                  0.008   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PCLO                  0.008   piccolo isoform 2 
PCLO                  0.008   piccolo isoform 1 
TET2                  0.007   tet oncogene family member 2 isoform b 
TET2                  0.007   tet oncogene family member 2 isoform a 
MAP1A                 0.007   microtubule-associated protein 1A 
APC2                  0.007   adenomatosis polyposis coli 2 
LOC100291076          0.007   PREDICTED: hypothetical protein XP_002347846 
UBE2E3                0.007   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.007   ubiquitin-conjugating enzyme E2E 3 
VPS37C                0.007   vacuolar protein sorting 37C 
SRRM2                 0.007   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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