Guide to the Human Genome
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Name: TINAGL1 Sequence: fasta or formatted (467aa) NCBI GI: 11545918
Description:

tubulointerstitial nephritis antigen-like 1

Referenced in:

Cysteine Proteases
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         28           2
 C cysteine            5.1         24           2
 D aspartate           5.4         25           2
 E glutamate           5.1         24           2
 F phenylalanine       2.8         13           2
 G glycine            11.1         52           2
 H histidine           4.1         19           2
 I isoleucine          3.6         17           1
 K lysine              1.7          8           1
 L leucine             8.4         39           5
 M methionine          3.2         15           2
 N asparagine          4.3         20           3
 P proline             6.6         31           3
 Q glutamine           4.1         19           3
 R arginine            7.9         37           3
 S serine              4.9         23           3
 T threonine           3.9         18           1
 V valine              5.1         24           2
 W tryptophan          3.2         15           2
 Y tyrosine            3.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulointerstitial nephritis antigen-like 1 
TINAG                 0.411   tubulointerstitial nephritis antigen 
CTSB                  0.134   cathepsin B preproprotein 
CTSB                  0.134   cathepsin B preproprotein 
CTSB                  0.134   cathepsin B preproprotein 
CTSB                  0.134   cathepsin B preproprotein 
CTSB                  0.134   cathepsin B preproprotein 
CTSC                  0.100   cathepsin C isoform a preproprotein 
CTSH                  0.064   cathepsin H isoform b precursor 
CTSH                  0.064   cathepsin H isoform a preproprotein 
CTSS                  0.063   cathepsin S preproprotein 
CTSL2                 0.057   cathepsin L2 preproprotein 
CTSL1                 0.056   cathepsin L1 preproprotein 
CTSL1                 0.056   cathepsin L1 preproprotein 
CTSZ                  0.054   cathepsin Z preproprotein 
CTSK                  0.045   cathepsin K preproprotein 
CTSW                  0.044   cathepsin W preproprotein 
CTSO                  0.039   cathepsin O preproprotein 
CTSF                  0.034   cathepsin F 
VWF                   0.018   von Willebrand factor preproprotein 
SSPO                  0.015   SCO-spondin 
MUC5AC                0.013   mucin 5AC 
MUC5B                 0.013   mucin 5, subtype B, tracheobronchial 
LOC100132635          0.012   PREDICTED: similar to mucin 5, partial 
BMPER                 0.011   BMP-binding endothelial regulator precursor protein ...
PRG4                  0.011   proteoglycan 4 isoform B 
NRD1                  0.010   nardilysin isoform b 
NRD1                  0.010   nardilysin isoform a 
PRG4                  0.010   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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