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Search of human proteins with 145301567
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145301567 hypothetical protein LOC56006 [Homo sapiens]
(520 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145301567 hypothetical protein LOC56006 [Homo sapiens] 1058 0.0
gi|50428940 mediator complex subunit 25 [Homo sapiens] 57 4e-08
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 52 2e-06
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 50 5e-06
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 50 7e-06
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 49 9e-06
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 49 9e-06
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 49 9e-06
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 49 9e-06
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 49 1e-05
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 48 2e-05
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 48 2e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 48 2e-05
gi|116268091 PHD finger protein 23 [Homo sapiens] 47 3e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 47 3e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 4e-05
gi|119943102 CREB binding protein isoform b [Homo sapiens] 47 4e-05
gi|119943104 CREB binding protein isoform a [Homo sapiens] 47 4e-05
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 47 6e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 6e-05
gi|71043876 undifferentiated embryonic cell transcription factor... 46 7e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 46 9e-05
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 46 9e-05
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 46 9e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 1e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 45 1e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 45 1e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 45 1e-04
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 45 2e-04
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 45 2e-04
>gi|145301567 hypothetical protein LOC56006 [Homo sapiens]
Length = 520
Score = 1058 bits (2737), Expect = 0.0
Identities = 520/520 (100%), Positives = 520/520 (100%)
Query: 1 MSESGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSV 60
MSESGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSV
Sbjct: 1 MSESGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSV 60
Query: 61 MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPE 120
MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPE
Sbjct: 61 MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPE 120
Query: 121 GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS 180
GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
Sbjct: 121 GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS 180
Query: 181 IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA 240
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA
Sbjct: 181 IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA 240
Query: 241 QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV 300
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
Sbjct: 241 QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV 300
Query: 301 EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG 360
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
Sbjct: 301 EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG 360
Query: 361 TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD 420
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
Sbjct: 361 TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD 420
Query: 421 FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM 480
FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
Sbjct: 421 FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM 480
Query: 481 ARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA 520
ARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA
Sbjct: 481 ARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA 520
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 57.0 bits (136), Expect = 4e-08
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 77 KQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS---TPEGTAPPPPAAPAPP 133
+Q PP P P + + L P+ + +G V +GA+ P+GTA PPP AP P
Sbjct: 562 QQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGP 621
Query: 134 KGEKEGQRPTQPVYQIQNRGMGTAAPA-AMDPVVGQAKLLPPERMKHSIK 182
G G P P+ + QN G + ++P Q + PP+ H ++
Sbjct: 622 PGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQ 671
Score = 38.5 bits (88), Expect = 0.015
Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 36/180 (20%)
Query: 4 SGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQK 63
+ H Q +E+++R G GG Q G G D P + + +
Sbjct: 542 TNHKQVQQQKLEQQQR----GMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVG 597
Query: 64 TPIILSKPPAERSKQPP------PPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS 117
+P + + QPP PP A + PP P P +++P+ G P +
Sbjct: 598 ASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGP------ILRPQNPGANPQLRSLLL 651
Query: 118 TPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPV---VGQAKLLPP 174
PPPP PP P ++ +Q G APA + P +GQ +L PP
Sbjct: 652 N-----PPPPQTGVPP--------PQASLHHLQPPG----APALLPPPHQGLGQPQLGPP 694
Score = 32.3 bits (72), Expect = 1.1
Identities = 36/149 (24%), Positives = 53/149 (35%), Gaps = 11/149 (7%)
Query: 71 PPAERSKQPP-PPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGT------- 122
PP ++ P PP P AP P + +V G P A GA + GT
Sbjct: 318 PPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVS 377
Query: 123 APPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPE-RMKHSI 181
P P AP G ++ + PA++D + LP + + H
Sbjct: 378 GPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQVYVNHGE 437
Query: 182 KLVDDQMNWCDSAIEYLLDQTDVLVVGVL 210
L +Q W I L+ Q + +G L
Sbjct: 438 NLKTEQ--WPQKLIMQLIPQQLLTTLGPL 464
Score = 30.0 bits (66), Expect = 5.3
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Query: 69 SKPPAERSKQPP--PPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP 126
S P +SKQP PP AP+ A ++P+ + P+ + G ++ +
Sbjct: 234 SAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQN------ 287
Query: 127 PAAPAPPKGEKEGQRPT-QPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
A K +K G P P+ +Q G P + P A LPP
Sbjct: 288 --AVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAP----APQLPP 330
Score = 29.6 bits (65), Expect = 7.0
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 13/94 (13%)
Query: 81 PPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQ 140
PPT + P L + +VL PV A P + P P PA P G
Sbjct: 209 PPTDVSQDPRHMVLVRGLVL---------PVGGGSAPGPLQSKQPVPLPPAAPSGATLSA 259
Query: 141 RPTQPV----YQIQNRGMGTAAPAAMDPVVGQAK 170
P QP+ Q Q G +AA A V AK
Sbjct: 260 APQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAK 293
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 51.6 bits (122), Expect = 2e-06
Identities = 50/152 (32%), Positives = 60/152 (39%), Gaps = 24/152 (15%)
Query: 32 SGPGGRERDYIAPWERERRDASEETS-----TSVMQKTPIILSKPPAERSKQPPPPTAPA 86
SG G E + + E ++S+ S T + T KPPA PPP P
Sbjct: 708 SGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPT 767
Query: 87 APPA--PAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAP--PKGEKEGQRP 142
PP PAP E P E TGA TP APP P+AP P PK EKE +
Sbjct: 768 PPPEDIPAPTEPT-----PASEA------TGAPTPP-PAPPSPSAPPPVVPKEEKEEETA 815
Query: 143 TQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
P + G PAA + V K P
Sbjct: 816 AAPPVE---EGEEQKPPAAEELAVDTGKAEEP 844
Score = 38.1 bits (87), Expect = 0.020
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 76 SKQPPPPTAPAAPPAPAPLEKPIVL--MKPREEGKGPVAVTGASTPEG-----TAPPPPA 128
S +P T P A A +KP+ L +K R P+ VT P T P PPA
Sbjct: 922 SPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPA 981
Query: 129 APAPPKGEKEGQRPTQPVYQIQNRGMGTAAPA 160
P P + E P QP + + A PA
Sbjct: 982 PPPPQNLQPESDAPQQPGSSPRGKSRSPAPPA 1013
Score = 34.7 bits (78), Expect = 0.22
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 68 LSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAST-----PEGT 122
L+KPPA +P ++P+ P PL P+ G +A T A
Sbjct: 1951 LAKPPARSGLEPA--SSPSKGSEPRPLVPPV-------SGHATIARTPAKNLAPHHASPD 2001
Query: 123 APPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMG----TAAPAAMDPV 165
P PPA+ + P EK +P + +++ R +G + +P ++PV
Sbjct: 2002 PPAPPASASDPHREKTQSKPFS-IQELELRSLGYHGSSYSPEGVEPV 2047
Score = 34.3 bits (77), Expect = 0.28
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 42 IAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLM 101
+ P R +AS + + Q + PP + +K PP AAP PAP P
Sbjct: 928 LTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAPTKPAPPAPP---- 983
Query: 102 KPRE-EGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
P+ + + S+P G + +PAPP +KE ++P
Sbjct: 984 PPQNLQPESDAPQQPGSSPRGKS----RSPAPP-ADKEAEKP 1020
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 50.1 bits (118), Expect = 5e-06
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 71 PPAERSKQPPPPTA-PAAPPAPAPLEKPIVLMKPREEGKGPVA---VTGASTPEGTAPPP 126
PP PPPPT P PP P PL + P GP+ + + P APPP
Sbjct: 166 PPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPP 225
Query: 127 PAAPAPPKGEKEGQRPTQPVYQIQNRGM-GTAAPAAMDPVVGQAKLLPP 174
P P PP P P + ++ + AP + P+ LLPP
Sbjct: 226 PPPPPPPT-----PPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPP 269
Score = 33.1 bits (74), Expect = 0.63
Identities = 32/114 (28%), Positives = 42/114 (36%), Gaps = 21/114 (18%)
Query: 72 PAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPP-PPAAP 130
P +++ P PPAP P P PR P + G ++ T PP PP +P
Sbjct: 273 PGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAP-PLPGVNSSSETPPPLPPKSP 331
Query: 131 ---APPKGEKEGQRP-------TQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
APP+ P +QP Q + G P G KL PP
Sbjct: 332 SFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGR---------PGAGGGKLNPP 376
Score = 29.6 bits (65), Expect = 7.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPI 98
PP PPPP APP P P P+
Sbjct: 4 PPPPPPPLPPPPPPLGAPPPPPPSAPPV 31
Score = 29.3 bits (64), Expect = 9.1
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 12/66 (18%)
Query: 72 PAERSKQPPPP----TAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPP 127
P R+ P P + P PPA L E G A T P APPPP
Sbjct: 126 PGSRAPSPRLPNKTISGPLIPPASPRLGNT-------SEAHG-AARTAPPRPNVPAPPPP 177
Query: 128 AAPAPP 133
P PP
Sbjct: 178 TPPPPP 183
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 49.7 bits (117), Expect = 7e-06
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 28 PQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAA 87
P N P R AP R + + + + PP R PPPP P++
Sbjct: 294 PHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSS 353
Query: 88 PPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKG 135
P+ P P VL G GPVA P PPPP P PP G
Sbjct: 354 APSGPPPPPPSVL------GVGPVA-----PPPPPPPPPPPGPPPPPG 390
Score = 44.3 bits (103), Expect = 3e-04
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAP 130
PP S PPPP P P P P P + VAV P PPPP P
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVP-PPPPNRMYPPPP--P 348
Query: 131 APPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDP 164
A P G P P G+G AP P
Sbjct: 349 ALPSSAPSGPPPPPP----SVLGVGPVAPPPPPP 378
Score = 38.9 bits (89), Expect = 0.012
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 70 KPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAA 129
K R PPPP + PP P P P G+G + P TA PPP
Sbjct: 269 KNELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAP--TAAPPPPP 326
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDP----VVGQAKLLPP 174
P+ P P + +Y + ++AP+ P V+G + PP
Sbjct: 327 PSRPSVAVPPPPPNR-MYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPP 374
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 49.3 bits (116), Expect = 9e-06
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPT----APAAPPAPAPLE--------------KPI 98
STS ++ + + S PP PPPP APA PP PAPL+ P+
Sbjct: 336 STSSLRAS--MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL 393
Query: 99 VLMKPREEGKGPVAVTGASTP------EGTAPPPPAAPAPPKGEKEGQRPTQPV 146
V P PV T P +G PPPP P PP G RP+ PV
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPP----PGIRPSSPV 443
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 58 TSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS 117
T + T +I ++P + + + P +P PP P PL P + + S
Sbjct: 295 TCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPL--------PSALSTSSLRASMTS 346
Query: 118 TPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
TP PPPP PA P P+ QI + A P P+V
Sbjct: 347 TPPPPVPPPPPPPATALQAPAVPPPPAPL-QIAPGVLHPAPPPIAPPLV 394
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTG-ASTPEGTAPPPPAA 129
P E PPPP P PP P PV VT A P G P P A
Sbjct: 416 PQGEVQGLPPPPPPPPLPP-------------PGIRPSSPVTVTALAHPPSGLHPTPSTA 462
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKL 183
P P P P Q+ P+ + PV+ A+ + E ++ I+L
Sbjct: 463 PGP----HVPLMPPSPPSQVIPASEPKRHPSTL-PVISDARSVLLEAIRKGIQL 511
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 49.3 bits (116), Expect = 9e-06
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPT----APAAPPAPAPLE--------------KPI 98
STS ++ + + S PP PPPP APA PP PAPL+ P+
Sbjct: 336 STSSLRAS--MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL 393
Query: 99 VLMKPREEGKGPVAVTGASTP------EGTAPPPPAAPAPPKGEKEGQRPTQPV 146
V P PV T P +G PPPP P PP G RP+ PV
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPP----PGIRPSSPV 443
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 58 TSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS 117
T + T +I ++P + + + P +P PP P PL P + + S
Sbjct: 295 TCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPL--------PSALSTSSLRASMTS 346
Query: 118 TPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
TP PPPP PA P P+ QI + A P P+V
Sbjct: 347 TPPPPVPPPPPPPATALQAPAVPPPPAPL-QIAPGVLHPAPPPIAPPLV 394
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTG-ASTPEGTAPPPPAA 129
P E PPPP P PP P PV VT A P G P P A
Sbjct: 416 PQGEVQGLPPPPPPPPLPP-------------PGIRPSSPVTVTALAHPPSGLHPTPSTA 462
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKL 183
P P P P Q+ P+ + PV+ A+ + E ++ I+L
Sbjct: 463 PGP----HVPLMPPSPPSQVIPASEPKRHPSTL-PVISDARSVLLEAIRKGIQL 511
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 49.3 bits (116), Expect = 9e-06
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPT----APAAPPAPAPLE--------------KPI 98
STS ++ + + S PP PPPP APA PP PAPL+ P+
Sbjct: 336 STSSLRAS--MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL 393
Query: 99 VLMKPREEGKGPVAVTGASTP------EGTAPPPPAAPAPPKGEKEGQRPTQPV 146
V P PV T P +G PPPP P PP G RP+ PV
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPP----PGIRPSSPV 443
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 58 TSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS 117
T + T +I ++P + + + P +P PP P PL P + + S
Sbjct: 295 TCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPL--------PSALSTSSLRASMTS 346
Query: 118 TPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
TP PPPP PA P P+ QI + A P P+V
Sbjct: 347 TPPPPVPPPPPPPATALQAPAVPPPPAPL-QIAPGVLHPAPPPIAPPLV 394
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTG-ASTPEGTAPPPPAA 129
P E PPPP P PP P PV VT A P G P P A
Sbjct: 416 PQGEVQGLPPPPPPPPLPP-------------PGIRPSSPVTVTALAHPPSGLHPTPSTA 462
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKL 183
P P P P Q+ P+ + PV+ A+ + E ++ I+L
Sbjct: 463 PGP----HVPLMPPSPPSQVIPASEPKRHPSTL-PVISDARSVLLEAIRKGIQL 511
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 49.3 bits (116), Expect = 9e-06
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPT----APAAPPAPAPLE--------------KPI 98
STS ++ + + S PP PPPP APA PP PAPL+ P+
Sbjct: 336 STSSLRAS--MTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL 393
Query: 99 VLMKPREEGKGPVAVTGASTP------EGTAPPPPAAPAPPKGEKEGQRPTQPV 146
V P PV T P +G PPPP P PP G RP+ PV
Sbjct: 394 VQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPP----PGIRPSSPV 443
Score = 38.5 bits (88), Expect = 0.015
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 9/109 (8%)
Query: 58 TSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS 117
T + T +I ++P + + + P +P PP P PL P + + S
Sbjct: 295 TCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPL--------PSALSTSSLRASMTS 346
Query: 118 TPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
TP PPPP PA P P+ QI + A P P+V
Sbjct: 347 TPPPPVPPPPPPPATALQAPAVPPPPAPL-QIAPGVLHPAPPPIAPPLV 394
Score = 35.8 bits (81), Expect = 0.097
Identities = 32/114 (28%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTG-ASTPEGTAPPPPAA 129
P E PPPP P PP P PV VT A P G P P A
Sbjct: 416 PQGEVQGLPPPPPPPPLPP-------------PGIRPSSPVTVTALAHPPSGLHPTPSTA 462
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKL 183
P P P P Q+ P+ + PV+ A+ + E ++ I+L
Sbjct: 463 PGP----HVPLMPPSPPSQVIPASEPKRHPSTL-PVISDARSVLLEAIRKGIQL 511
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 48.5 bits (114), Expect = 1e-05
Identities = 41/109 (37%), Positives = 45/109 (41%), Gaps = 19/109 (17%)
Query: 70 KPPAERSKQPPPPTAPAAPPA--PAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPP 127
KPPA PPP P PP PAP E P E TGA TP APP P
Sbjct: 768 KPPATLGADGPPPGPPTPPPEDIPAPTEPT-----PASEA------TGAPTPP-PAPPSP 815
Query: 128 AAPAP--PKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
+AP P PK EKE + P + G PAA + V K P
Sbjct: 816 SAPPPVVPKEEKEEETAAAPPVE---EGEEQKPPAAEELAVDTGKAEEP 861
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Query: 76 SKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKG-PVAVTGASTPEG-----TAPPPPAA 129
S +P T P A A +KP+ L + ++ P VT P T P PPA
Sbjct: 939 SPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAP 998
Query: 130 PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPA 160
P P + E P QP + + A PA
Sbjct: 999 PPPQNLQPESDAPQQPGSSPRGKSRSPAPPA 1029
Score = 34.7 bits (78), Expect = 0.22
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 68 LSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAST-----PEGT 122
L+KPPA +P ++P+ P PL P+ G +A T A
Sbjct: 1967 LAKPPARSGLEPA--SSPSKGSEPRPLVPPV-------SGHATIARTPAKNLAPHHASPD 2017
Query: 123 APPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMG----TAAPAAMDPV 165
P PPA+ + P EK +P + +++ R +G + +P ++PV
Sbjct: 2018 PPAPPASASDPHREKTQSKPFS-IQELELRSLGYHGSSYSPEGVEPV 2063
Score = 31.2 bits (69), Expect = 2.4
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 42 IAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPP-----PTAPAAPPAPAPLEK 96
+ P R +AS + + Q + PP PP PT PA PPAP P
Sbjct: 945 LTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPA-PPAPPP--- 1000
Query: 97 PIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
P L + + P S+P G + +PAPP +KE ++P
Sbjct: 1001 PQNLQPESDAPQQP-----GSSPRGKS----RSPAPP-ADKEAEKP 1036
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 48.1 bits (113), Expect = 2e-05
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 63 KTPIILSKPPAERSKQPPPPTAPAAPPAPAP----LEKPIVLMKPR--EEGKGPVAVTGA 116
+TP++ PP PP P P PPAPAP PI+ P+ + KG
Sbjct: 235 QTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADT 294
Query: 117 STPEGTAP--PPPAAPAPPKGEKEGQR 141
+TP P PP+ P PK K GQR
Sbjct: 295 TTPTTIDPIHEPPSLPPEPKTTKLGQR 321
Score = 38.5 bits (88), Expect = 0.015
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 69 SKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPA 128
S PP ++ QP PP A P P P P ++++ PV P T PP P
Sbjct: 203 STPPQTQTPQPNPPPVQATPH-PFPAVTPDLIVQT------PVMTVVPPQPLQTPPPVPP 255
Query: 129 APAPPKGEK----EGQRP-----TQPVYQIQ--NRGMGTAAPAAMDPVVGQAKLLPPE 175
P PP + P QPV + R T P +DP + + LPPE
Sbjct: 256 QPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDP-IHEPPSLPPE 312
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 48.1 bits (113), Expect = 2e-05
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 63 KTPIILSKPPAERSKQPPPPTAPAAPPAPAP----LEKPIVLMKPR--EEGKGPVAVTGA 116
+TP++ PP PP P P PPAPAP PI+ P+ + KG
Sbjct: 235 QTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADT 294
Query: 117 STPEGTAP--PPPAAPAPPKGEKEGQR 141
+TP P PP+ P PK K GQR
Sbjct: 295 TTPTTIDPIHEPPSLPPEPKTTKLGQR 321
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 44 PWERERRDASEETSTSVMQKTPIILSKP-----PAERSKQPPPPTAPAAPPAPAPLEKPI 98
P + + E + SV+Q P+++ K P RS+ P P P P ++ P+
Sbjct: 1085 PQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPV 1144
Query: 99 VL-----MKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRG 153
L MKP + G+ + PE A PPP AP K ++E + P P ++ +
Sbjct: 1145 HLPQRPEMKPVDVGRPVIR-----PPEQNA-PPPGAPDKDKQKQEPKTPVAPKKDLKIKN 1198
Query: 154 MGTAA 158
MG+ A
Sbjct: 1199 MGSWA 1203
Score = 38.5 bits (88), Expect = 0.015
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 69 SKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPA 128
S PP ++ QP PP A P P P P ++++ PV P T PP P
Sbjct: 203 STPPQTQTPQPNPPPVQATPH-PFPAVTPDLIVQT------PVMTVVPPQPLQTPPPVPP 255
Query: 129 APAPPKGEK----EGQRP-----TQPVYQIQ--NRGMGTAAPAAMDPVVGQAKLLPPE 175
P PP + P QPV + R T P +DP + + LPPE
Sbjct: 256 QPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDP-IHEPPSLPPE 312
Score = 37.0 bits (84), Expect = 0.044
Identities = 33/137 (24%), Positives = 50/137 (36%), Gaps = 30/137 (21%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEK---------PIVLMKPREEGK-----GPVAVTGA 116
PP ++ + PPPP P+ P AP K + +++P+ G G
Sbjct: 769 PPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPIL 828
Query: 117 STPEGTAPP----PPAAPAPPKGEKEG------------QRPTQPVYQIQNRGMGTAAPA 160
P+ PP PP PP + Q+P++P + A P
Sbjct: 829 HLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPP 888
Query: 161 AMDPVVGQAKLLPPERM 177
A+ P + Q LLP M
Sbjct: 889 AVSPALTQTPLLPQPPM 905
Score = 36.2 bits (82), Expect = 0.075
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 57 STSVMQKTPIILSKPP-----AERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPV 111
S V + P L PP + +QPPPP P P P +P PR P+
Sbjct: 947 SVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQP----PPRPVHLQPM 1002
Query: 112 A----VTGASTPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQN 151
+ P+G PP P PP + +P +P IQ+
Sbjct: 1003 QFSTHIQQPPPPQGQQPPHP----PPGQQPPPPQPAKPQQVIQH 1042
Score = 34.7 bits (78), Expect = 0.22
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 27/88 (30%)
Query: 60 VMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
V TP++ P + QPPPP PP P P + + +P
Sbjct: 938 VQPPTPLL---PSVKVQSQPPPP----LPPPPHPSVQQQLQQQP---------------- 974
Query: 120 EGTAPPPPAAPAPPKGEKEGQRPTQPVY 147
PPPP P PP +++ Q P +PV+
Sbjct: 975 ---PPPPPPQPQPPP-QQQHQPPPRPVH 998
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 68 LSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLM---KPREEGKGPVAVTGASTPEGTAP 124
+ +PP + +QPP P PP P P + V+ PR P + TG AP
Sbjct: 1008 IQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYS-TGHLR---EAP 1063
Query: 125 PPPAAPAPPKGEKEG---QRPTQPVYQIQNRGMGTAAPAAMDPVV 166
P +P + + Q P Q Q + + + A+ P+V
Sbjct: 1064 SPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLV 1108
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 29/154 (18%)
Query: 32 SGPGG-----RERDYIAPWERERRDASEETSTSVMQKTPIILSK--PPAER--SKQPPPP 82
SG GG ++ + E E+++ E+ ++ + + P AE+ +K PPPP
Sbjct: 346 SGQGGSPCWKKQEQKLDDEEEEKKEEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPP 405
Query: 83 TAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
P AP P PL P P P +PPP +P PP ++E +
Sbjct: 406 LTPPAPSPPPPLPPP---------STSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEES 456
Query: 143 TQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPER 176
PV PA G+ L P +R
Sbjct: 457 PPPV-----------VPATCSRKRGRPPLTPSQR 479
Score = 40.8 bits (94), Expect = 0.003
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 71 PPAERSKQPP--PPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPA 128
PP S PP PP P P P P P + +EE PV S G P P+
Sbjct: 418 PPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPS 477
Query: 129 APAPPKGEKEGQRPTQP 145
A + + G T P
Sbjct: 478 QRAEREAARAGPEGTSP 494
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/118 (27%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 39 RDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPI 98
R +I P R +T M + P K +PP T+P P PAP+ P
Sbjct: 525 RQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPP 584
Query: 99 VLMKP---------------REEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQR 141
P RE ++T P APPPP AP+PP R
Sbjct: 585 RAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPATSSR 642
Score = 40.0 bits (92), Expect = 0.005
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 79 PPPPTAPAAPPAPAP-------LEKPIVLMKPR---EEGKGPVAVTGASTPEGTAPPPPA 128
PPPP AP PPAP+P +P++L P+ E + + + P AP P
Sbjct: 619 PPPPPAPPPPPAPSPPPAPATSSRRPLLLRAPQFTPSEAHLKIYESVLTPPPLGAPEAPE 678
Query: 129 APAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPV 165
PP + + + V + + + AP PV
Sbjct: 679 PEPPPADDSPAEPEPRAVGRTNHLSLPRFAPVVTTPV 715
Score = 38.5 bits (88), Expect = 0.015
Identities = 36/136 (26%), Positives = 46/136 (33%), Gaps = 36/136 (26%)
Query: 46 ERERRDASEETSTSVMQK---------TPIILSKPPA--ERSKQPPPPTAPAAPP--APA 92
E+E R +EE + ++ TP S PP S PPPP P PP +P
Sbjct: 380 EKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPP 439
Query: 93 PLEKPIVLMKPREEGKGPVAVTGAST-----------------------PEGTAPPPPAA 129
PL P E+ + P V A+ PEGT+PP P
Sbjct: 440 PLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTP 499
Query: 130 PAPPKGEKEGQRPTQP 145
G E P
Sbjct: 500 STATGGPPEDSPTVAP 515
Score = 36.2 bits (82), Expect = 0.075
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 72 PAERSKQPPPPTAPAAP-PAPAPLEKPIVLMKPREEGKGPVAVTGASTP-EGTAPPPPAA 129
P RS++P +P AP P P+ P + P+ P +V A TP G PP A
Sbjct: 1909 PPRRSRRP----SPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPPGPA 1964
Query: 130 PAPPKGEKEG 139
P+PP E G
Sbjct: 1965 PSPPPPEDLG 1974
Score = 32.7 bits (73), Expect = 0.82
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 85 PAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRPTQ 144
PA PP P PL ++ P + + V ST G +PP P P+ +++G+ ++
Sbjct: 2251 PAPPPPPPPLTL-VLSSGPASPPRQAIRVKRVSTFSGRSPPAPPPYKAPRLDEDGE-ASE 2308
Query: 145 PVYQIQNRGMG 155
Q+ G G
Sbjct: 2309 DTPQVPGLGSG 2319
Score = 31.6 bits (70), Expect = 1.8
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 64 TPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTA 123
TP L P A + PP +P A P P + + L PR PV +TP
Sbjct: 667 TPPPLGAPEAPEPEPPPADDSP-AEPEPRAVGRTNHLSLPR---FAPV----VTTPVKAE 718
Query: 124 PPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
P APA G + + QP+ +Q + P A+ P Q +L PP
Sbjct: 719 VSPHGAPALSNGPQTQAQLLQPLQALQTQ----LLPQALPP--PQPQLQPP 763
Score = 31.2 bits (69), Expect = 2.4
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 23 PGSGGPQNLSG--PGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQ-- 78
P G P +L+ P + D+ AP R RR S + P + PP + S Q
Sbjct: 1886 PSPGSPSSLTHHIPTVGDPDFPAPPRRSRRP-----SPLAPRPPPSRWASPPLKTSPQLR 1940
Query: 79 PPPPTAPA----------APPAPAPLEKP 97
PPPT+ APP PAP P
Sbjct: 1941 VPPPTSVVTALTPTSGELAPPGPAPSPPP 1969
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPI--ILSKPPAERSKQPP 80
PG GP+ +G GG + +A E +D S++Q+ + + P+ +
Sbjct: 1040 PGPPGPRRGAGAGGPREEVVAHPGPEEQD-------SLLQRKSARRCVKQRPSYDIFEDS 1092
Query: 81 PPTAPAAPPAP---APLEKPIVLMKPREEGK 108
+ P PPAP P E + L +P E+ +
Sbjct: 1093 DDSEPGGPPAPRRRTPRENELPLPEPEEQSR 1123
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/80 (28%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 60 VMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
++ K + K E PPP P PP +P P P G + V G P
Sbjct: 2193 LVNKLGQVFVKMAGEGEPVPPPVKQPPLPPTISP-TAPTSWTLPPGPLLGVLPVVGVVRP 2251
Query: 120 EGTAPPPP------AAPAPP 133
PPPP + PA P
Sbjct: 2252 APPPPPPPLTLVLSSGPASP 2271
Score = 29.6 bits (65), Expect = 7.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 123 APPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAP 159
AP PP PA +GE+ +R Q + ++ R AP
Sbjct: 170 APTPPKTPARKRGEEGTERMVQALTELLRRAQAPQAP 206
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 47.4 bits (111), Expect = 3e-05
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 15 ERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAE 74
+R+ R PG+G +G G R P + E+R +++ ++K AE
Sbjct: 182 DRKNRKLGPGAG-----AGFGVLRRPRPTPGDGEKRSRIKKSKKRKLKK---------AE 227
Query: 75 RSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPP 133
R + PPP P APP+ E+ + EE + V G P P PP AP PP
Sbjct: 228 RGDRLPPPGPPQAPPSDTDSEEE-EEEEEEEEEEEMATVVGGEAPVPVLPTPPEAPRPP 285
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.4 bits (111), Expect = 3e-05
Identities = 35/106 (33%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 50 RDASEETSTSVMQKTPIILSKPPAERSKQP-PPPTAPAAP---PAPAPLEKPIVLMKPRE 105
+D+S+ P + S PPA S P PPT+ A P P P P P V P
Sbjct: 104 QDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAP-- 161
Query: 106 EGKGPVAVTGASTPE------GTAPPPPAAPAPPKGEKEGQRPTQP 145
G P + P G PPP A P P G K+G P P
Sbjct: 162 PGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGP 207
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 65 PIILSKPPAERSKQPPPPTA-PAAPP--APAPLEKPIVLMKPR-----------EEGKGP 110
P I PP ++ +QPPP P PP P P +P +P +G GP
Sbjct: 58 PPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP 117
Query: 111 VAVTGASTP-EGTAPP--PPAAPAPPKGEKEGQRPTQP 145
G++ P +APP PP + APP G G PT P
Sbjct: 118 APGVGSAPPASSSAPPATPPTSGAPP-GSGPGPTPTPP 154
Score = 38.5 bits (88), Expect = 0.015
Identities = 31/105 (29%), Positives = 39/105 (37%), Gaps = 8/105 (7%)
Query: 71 PPAERSKQPPPPTAPAAPP--APAPLEKPIVLMKPREEGKGPVAVTGAS-TPEGTAP--- 124
P + +QPPPP ++ P A P P V P P A S P G+ P
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT 150
Query: 125 --PPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVG 167
PPPA + P G P+ V + G P A P G
Sbjct: 151 PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG 195
Score = 36.6 bits (83), Expect = 0.057
Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 25/138 (18%)
Query: 65 PIILSKPPAERSKQPP-------------PPTAPAAPPAPAPLEKPIVLMKPREEGKGPV 111
P + S PP PP PP PAA P P P K + GK P
Sbjct: 155 PAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPG 214
Query: 112 AVT-----GASTPEGTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
G STP G PP P+G G++ P +Q ++G P
Sbjct: 215 GPKPGGGPGLSTPGGHPKPPHRGGGEPRG---GRQHHPPYHQQHHQGPPPGGPGGR---- 267
Query: 167 GQAKLLPPERMKHSIKLV 184
+ K+ E K ++ L+
Sbjct: 268 SEEKISDSEGFKANLSLL 285
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.0 bits (110), Expect = 4e-05
Identities = 35/103 (33%), Positives = 39/103 (37%), Gaps = 16/103 (15%)
Query: 67 ILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP 126
++ PP + PP P AP+ P APAP P P T A P A PP
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP-----PPAPATLARPPGHPAGPP 291
Query: 127 PAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQA 169
AAPA P P QN G AAPA G A
Sbjct: 292 TAAPAVP-----------PPAAAQNGGSAGAAPAPAPAAGGPA 323
Score = 38.9 bits (89), Expect = 0.012
Identities = 38/120 (31%), Positives = 46/120 (38%), Gaps = 22/120 (18%)
Query: 71 PPAERSK------QPPPPTAPAAPPAPAPLEKPIVLMKPREEGKG------PVAVTGAST 118
PPA R++ Q P P +P P PA P ++P EG P A A+
Sbjct: 90 PPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAG 149
Query: 119 PEGTAPPPPAAPAPPKG-----EKEGQRPTQPVYQIQNRGMG-TAAPAAMDPVVGQAKLL 172
PE P PA PA P G + G P G G A P A + G A LL
Sbjct: 150 PE----PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALL 205
Score = 37.7 bits (86), Expect = 0.026
Identities = 41/157 (26%), Positives = 49/157 (31%), Gaps = 32/157 (20%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPP 82
PG GGPQ P R P++ + P +K PPP
Sbjct: 97 PGGGGPQRPGPPSPRR--------------------------PLVPAGPAPPAAKLRPPP 130
Query: 83 TAPAAPPAPAPLEKPIVL-MKPREEG----KGPVAVTGASTP-EGTAPPPPAAPAPPKGE 136
A AP P + +P G GP A+ + P G P P P P K
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPA 190
Query: 137 KEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLP 173
G T AAPA G A LLP
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP 227
Score = 36.6 bits (83), Expect = 0.057
Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 13/96 (13%)
Query: 64 TPIILSKPPAERSKQPPPPTA----------PAAPPAPAP-LEKPIVLMKPREEGKGPVA 112
+P P A + PPPP A PA PP AP + P G P
Sbjct: 256 SPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAP 315
Query: 113 VTGASTPEGTA--PPPPAAPAPPKGEKEGQRPTQPV 146
A P G + P P AA A P + + P + V
Sbjct: 316 APAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351
Score = 32.7 bits (73), Expect = 0.82
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 72 PAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGAS----------TPEG 121
PA S QP P A AAP E P +++ +A +G + T +G
Sbjct: 322 PAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQG 381
Query: 122 TAPPPPAAPAPPKGEKEG 139
P P A P P G G
Sbjct: 382 ALPSPAAVPPPAPGTPTG 399
Score = 32.0 bits (71), Expect = 1.4
Identities = 46/176 (26%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTP-----IILSKPPAERSK 77
P +GGP +SG G AP E+ V+Q P + S P + +
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAP----APGVKAESPKRVVQAAPPAAQTLAASGPASTAAS 372
Query: 78 QPPPPT------APAAPPAPAP-----LEKPIVLMKPREEGKGPVAVT----GASTPEGT 122
PT +PAA P PAP L K + + P A T TP
Sbjct: 373 MVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVL 432
Query: 123 APPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAP-AAMDPVVGQAKLLPPERM 177
AP P P P + Q P V G P A+ + QA P M
Sbjct: 433 APRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQPQTTM 488
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 47.0 bits (110), Expect = 4e-05
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 49 RRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAP--PAPAPLEKPIVLMKPREE 106
RR A+ T Q P S PP ++QP P P P P P+P+
Sbjct: 1829 RRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVAR 1888
Query: 107 GKGPVAV-TGASTPEGTAPPPPAAPAPPKGEKEGQ-----RPTQPVYQIQ--------NR 152
+ P V TG T + APPPPA P P E Q + Q +Y++
Sbjct: 1889 TQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRT 1948
Query: 153 GMGTAAPAAMDPV 165
GMGT + M PV
Sbjct: 1949 GMGTPG-SQMAPV 1960
Score = 33.1 bits (74), Expect = 0.63
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 16/111 (14%)
Query: 65 PIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAP 124
P+ + P A + PP +P P P P G ++ +TP G P
Sbjct: 794 PLNMLGPQASQLPCPPVTQSPLHPTPP-----------PASTAAGMPSLQH-TTPPGMTP 841
Query: 125 PPPAAPAPPKG--EKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLP 173
P PAAP P GQ PT + + + P QA++ P
Sbjct: 842 PQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ--AAAQAQVTP 890
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 47.0 bits (110), Expect = 4e-05
Identities = 41/133 (30%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 49 RRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAP--PAPAPLEKPIVLMKPREE 106
RR A+ T Q P S PP ++QP P P P P P+P+
Sbjct: 1867 RRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVAR 1926
Query: 107 GKGPVAV-TGASTPEGTAPPPPAAPAPPKGEKEGQ-----RPTQPVYQIQ--------NR 152
+ P V TG T + APPPPA P P E Q + Q +Y++
Sbjct: 1927 TQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRT 1986
Query: 153 GMGTAAPAAMDPV 165
GMGT + M PV
Sbjct: 1987 GMGTPG-SQMAPV 1998
Score = 33.1 bits (74), Expect = 0.63
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 16/111 (14%)
Query: 65 PIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAP 124
P+ + P A + PP +P P P P G ++ +TP G P
Sbjct: 832 PLNMLGPQASQLPCPPVTQSPLHPTPP-----------PASTAAGMPSLQH-TTPPGMTP 879
Query: 125 PPPAAPAPPKG--EKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLP 173
P PAAP P GQ PT + + + P QA++ P
Sbjct: 880 PQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ--AAAQAQVTP 928
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 46.6 bits (109), Expect = 6e-05
Identities = 51/198 (25%), Positives = 77/198 (38%), Gaps = 27/198 (13%)
Query: 5 GHSQP-GLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQK 63
G S+P G+Y ER + + P+ + R + AP+ A E +S ++
Sbjct: 150 GPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAGGSAGPEACSSAERR 209
Query: 64 T---PIILSKP---PAERSKQP---PPPTAPAAPPAPAPLEKPI--VLMKPREEGKG--- 109
P + P A RS +P PP +P A A PL+ I +L + R G G
Sbjct: 210 ARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPR 269
Query: 110 --PVAVTGASTPEGTA--PPPPAAPAP--------PKGEKEGQRPTQPVYQIQNRGMGTA 157
P G + + PP A+P+P P E+ G PT P +
Sbjct: 270 TSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWE 329
Query: 158 APAAMDPVVGQAKLLPPE 175
+ AA +P A PP+
Sbjct: 330 SEAAPEPAAPPAAPSPPD 347
Score = 34.3 bits (77), Expect = 0.28
Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 29/124 (23%)
Query: 18 RRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAER-S 76
RR + G+G P+ + PGG D SV Q+ P P + R +
Sbjct: 258 RRRRRRGAGQPR--TSPGGA-------------DGGPRRQNSVRQRPPDASPSPGSARPA 302
Query: 77 KQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGE 136
++P P +PA L + E P A PPAAP+PP
Sbjct: 303 REPSLERVGGHPTSPAALSRAWASSWESEAAPEPAA-------------PPAAPSPPDSP 349
Query: 137 KEGQ 140
EG+
Sbjct: 350 AEGR 353
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 46.6 bits (109), Expect = 6e-05
Identities = 35/98 (35%), Positives = 38/98 (38%), Gaps = 10/98 (10%)
Query: 71 PPAERSKQPPPPT---APAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPP 127
PP+ QP P AP A P PAP P V P AV P PPPP
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPP---LPPPP 215
Query: 128 AAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPV 165
PAPP + Q+P P Q G A A PV
Sbjct: 216 QPPAPP----QQQQPPPPQPQPPPEGGAVRAGGAARPV 249
Score = 41.2 bits (95), Expect = 0.002
Identities = 34/102 (33%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 49 RRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAP--AAPPAPAPLEKPIVLMKPREE 106
RR A+ + P + + PPPP AP AA PA AP P
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSP 162
Query: 107 G---KGPVAVTGASTPEGTAPPPPAAP---APPKGEKEGQRP 142
G GP A A P PP PAAP APP G + P
Sbjct: 163 GPAQPGPRAQRAA--PLAAPPPAPAAPPAVAPPAGPRRAPPP 202
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/116 (27%), Positives = 41/116 (35%), Gaps = 24/116 (20%)
Query: 70 KPPAERSKQPPPPTAP----------AAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
+PP + P PP AP A PP PAP P + P A+
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPV-----AAAAPARAPRAAAA 154
Query: 120 EGTAPPPPAAPAP-PKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPP 174
TAPP P P P+ ++ P AAP A+ P G + PP
Sbjct: 155 AATAPPSPGPAQPGPRAQRAAPLAAPP--------PAPAAPPAVAPPAGPRRAPPP 202
Score = 36.6 bits (83), Expect = 0.057
Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 26/98 (26%)
Query: 71 PPAERSKQPPPPTAPAAPPAP----APLEKPIVLMK--------------PREEGKGPVA 112
P A + PPP AP PPAP AP P PR + P+A
Sbjct: 119 PAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLA 178
Query: 113 VTGASTPEGTAPP---PPAAP--APPKGEKEGQRPTQP 145
A P APP PPA P APP + P P
Sbjct: 179 ---APPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPP 213
>gi|71043876 undifferentiated embryonic cell transcription factor 1
[Homo sapiens]
Length = 341
Score = 46.2 bits (108), Expect = 7e-05
Identities = 58/207 (28%), Positives = 76/207 (36%), Gaps = 46/207 (22%)
Query: 16 RRRRWKEPGSGGPQ-------NLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIIL 68
+R R + PGSG PQ N P E D RDA T ++ +P
Sbjct: 153 KRPRRRSPGSGRPQRARRPVPNAHAPAPSEPDATPLPTARDRDADP---TWTLRFSP--- 206
Query: 69 SKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPA 128
PP P AP +PPAPAP + + R +GP G+ PPPPA
Sbjct: 207 -SPPKSADASP----APGSPPAPAPTALATCIPEDRAPVRGP----------GSPPPPPA 251
Query: 129 A--PAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHSIKLVDD 186
P P G E P + TA + + A +L P R D
Sbjct: 252 REDPDSPPGRPEDCAPPPAA----PPSLNTALLQTLGHLGDIANILGPLR---------D 298
Query: 187 QMNWCDSAIEYL---LDQTDVLVVGVL 210
Q+ + +E L DQT L VG +
Sbjct: 299 QLLTLNQHVEQLRGAFDQTVSLAVGFI 325
Score = 33.9 bits (76), Expect = 0.37
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 15/52 (28%)
Query: 80 PPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPA 131
PPP AP APP+PA + +PR G P GT P PA+P+
Sbjct: 8 PPPLAPPAPPSPASPDP-----EPRTPGDAP----------GTPPRRPASPS 44
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 45.8 bits (107), Expect = 9e-05
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 13/116 (11%)
Query: 79 PPPPTAPAAPP-----APAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPP 133
PPPP+ P+ PP AP P P P TG + P PPPP P PP
Sbjct: 347 PPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
Query: 134 KGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAK--LLPPERMKHSIKLVDDQ 187
+GQ P T P + P V A+ LL R ++ V++Q
Sbjct: 407 FTGADGQPAIPPPLS------DTTKPKSSLPAVSDARSDLLSAIRQGFQLRRVEEQ 456
Score = 41.6 bits (96), Expect = 0.002
Identities = 34/104 (32%), Positives = 39/104 (37%), Gaps = 10/104 (9%)
Query: 71 PPAERSKQPPPPTAP-AAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPP--PP 127
PPA PP P A PPAP P P++ + P PV TP +PP PP
Sbjct: 301 PPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPP---PVGFGSPGTPPPPSPPSFPP 357
Query: 128 ----AAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVG 167
AAP PP PT P + G P P G
Sbjct: 358 HPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPG 401
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 16/81 (19%)
Query: 74 ERSKQPPPPTAPAA------------PPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEG 121
+ S PPPP + +A PP PA P+ + G G +S
Sbjct: 242 DASSYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPV----DNQRGSGLAGPKRSSVVSP 297
Query: 122 TAPPPPAAPAPPKGEKEGQRP 142
+ PPP P G K G P
Sbjct: 298 SHPPPAPPLGSPPGPKPGFAP 318
Score = 29.6 bits (65), Expect = 7.0
Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 19/107 (17%)
Query: 47 RERRDASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAA-----------PPAPAPLE 95
+E+ S T V Q I + S PPP + A+ PP PA
Sbjct: 216 KEKLGTSGYPPTLVYQNGSIGCVENVDASSYPPPPQSDSASSPSPSFSEDNLPPPPAEFS 275
Query: 96 KPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
P+ + G G +S + PP PAPP G G +P
Sbjct: 276 YPV----DNQRGSGLAGPKRSSVVSPSHPP----PAPPLGSPPGPKP 314
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 45.8 bits (107), Expect = 9e-05
Identities = 41/147 (27%), Positives = 53/147 (36%), Gaps = 29/147 (19%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPP 82
PG P G G D A W RE E T + Q +P+ SKP S P PP
Sbjct: 498 PGDRKPLYHYGRGMNPADKPA-WARE---VEERTRMNKQQNSPLAKSKPG---STGPEPP 550
Query: 83 TAPAAPPAPAPLEKPIVLMKPREEGKGP------------VAVTGASTPEGTAPPPPAAP 130
A+P P PL + + +P E +GP A + P+ P P A P
Sbjct: 551 IPQASPGPPGPLSQTPPMQRPVEPQEGPHKSLQDQPTRNLAAFPASHDPDPAIPAPTATP 610
Query: 131 ----------APPKGEKEGQRPTQPVY 147
+ P E G P P +
Sbjct: 611 SARGAVIRQNSDPTSEGPGPSPNPPAW 637
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 45.8 bits (107), Expect = 9e-05
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 9/129 (6%)
Query: 51 DASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPL--EKPIVLMKPREEGK 108
D S+E S S++ P PP +K PP+ P P P P +P P + +
Sbjct: 22 DVSQEESPSLIAGNP--QGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 79
Query: 109 GPVAVTGASTPEGTAPPPPAAP--APPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVV 166
GP G + P+G PPPP P PP+G+K + P G P P
Sbjct: 80 GP-PPQGGNKPQG--PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 136
Query: 167 GQAKLLPPE 175
G+ + PP+
Sbjct: 137 GKPQGPPPQ 145
Score = 40.0 bits (92), Expect = 0.005
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPL-EKPIVLMKPREEGKGPVAVTGASTPEGTAPPP--P 127
PP + +P P P P P P +K P + +GP G + P+G PPP P
Sbjct: 81 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPP-QGGNQPQGPPPPPGKP 139
Query: 128 AAPAPPKGEKEGQRPTQP 145
P PP+G + Q P P
Sbjct: 140 QGP-PPQGGNKPQGPPPP 156
Score = 40.0 bits (92), Expect = 0.005
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 71 PPAERSKQ--PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP-- 126
PP +K PPPP P PP P K P + +GP G + P+G PPP
Sbjct: 205 PPQGGNKPQGPPPPGKPQGPP-PQGDNKSQSARSPPGKPQGPPP-QGGNQPQGPPPPPGK 262
Query: 127 PAAPAPPKGEKEGQRPTQP 145
P P PP+G + Q P P
Sbjct: 263 PQGP-PPQGGNKPQGPPPP 280
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 71 PPAERSKQ--PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP-- 126
PP +K PPPP P PP P K P + +GP G + P+G PPP
Sbjct: 143 PPQGGNKPQGPPPPGKPQGPP-PQGDNKSRSSRSPPGKPQGPPP-QGGNQPQGPPPPPGK 200
Query: 127 PAAPAPPKGEKEGQRPTQP 145
P P PP+G + Q P P
Sbjct: 201 PQGP-PPQGGNKPQGPPPP 218
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 71 PPAERSKQ--PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP-- 126
PP +K PPPP P PP P K P + +GP G + P+G PPP
Sbjct: 267 PPQGGNKPQGPPPPGKPQGPP-PQGGSKSRSSRSPPGKPQGPPP-QGGNQPQGPPPPPGK 324
Query: 127 PAAPAPPKGEKEGQRPTQP 145
P P PP+G + Q P P
Sbjct: 325 PQGP-PPQGGNKPQGPPPP 342
Score = 37.7 bits (86), Expect = 0.026
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 19/90 (21%)
Query: 71 PPAERSKQ--PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPA 128
PP +K PPPP P PP P K P + +GP G + P+G PPPPA
Sbjct: 329 PPQGGNKPQGPPPPGKPQGPP-PQGGSKSRSARSPPGKPQGPPQQEG-NNPQG--PPPPA 384
Query: 129 A------PAPPKGEKEGQ-------RPTQP 145
APP G+ +G RP++P
Sbjct: 385 GGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
Score = 37.0 bits (84), Expect = 0.044
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 9/129 (6%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSK-PPAERSKQP-- 79
P G PQ GG + P + + + + S ++P + PP + QP
Sbjct: 196 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG 255
Query: 80 -PPPTAPAAPPAPAPLEKPIVLMKPREEGK--GPVAVTGASTPEGTAPPPPAAPAPPKGE 136
PPP P P KP P GK GP G+ + +PP PP+G
Sbjct: 256 PPPPPGKPQGPPPQGGNKP---QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGG 312
Query: 137 KEGQRPTQP 145
+ Q P P
Sbjct: 313 NQPQGPPPP 321
Score = 36.2 bits (82), Expect = 0.075
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 27/141 (19%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSK-PPAERSKQP-- 79
P G PQ GG + P + + + + S ++P + PP + QP
Sbjct: 134 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG 193
Query: 80 -PPPTA------------PAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP 126
PPP P PP P + P P+ + K A + P+G PPP
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP----PPQGDNKSQSARSPPGKPQG--PPP 247
Query: 127 -----PAAPAPPKGEKEGQRP 142
P P PP G+ +G P
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPP 268
Score = 35.8 bits (81), Expect = 0.097
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPL--EKPIVLMKPREEGKGPVAVTGASTPEGTAPP-PP 127
PP + K P + P P P P +P P + +GP G + P+G PP P
Sbjct: 101 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP-QGGNKPQGPPPPGKP 159
Query: 128 AAPAPPKGEKEGQRPTQPVYQIQN-RGMGTAAPAAMDPVVGQAKLLPPE 175
P PP+G+ + + P + Q G P P G+ + PP+
Sbjct: 160 QGP-PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 207
Score = 35.4 bits (80), Expect = 0.13
Identities = 34/140 (24%), Positives = 49/140 (35%), Gaps = 26/140 (18%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQP--- 79
P G PQ GG + P + + + + + P PP + QP
Sbjct: 73 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 132
Query: 80 PPPTA------------PAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPP- 126
PPP P PP P + P P+ + K + + P+G PPP
Sbjct: 133 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGP----PPQGDNKSRSSRSPPGKPQG--PPPQ 186
Query: 127 ----PAAPAPPKGEKEGQRP 142
P P PP G+ +G P
Sbjct: 187 GGNQPQGPPPPPGKPQGPPP 206
Score = 35.0 bits (79), Expect = 0.17
Identities = 42/158 (26%), Positives = 55/158 (34%), Gaps = 13/158 (8%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSK-PPAERSKQP-- 79
P G PQ GG + P + + + S S ++P + PP + QP
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQG 317
Query: 80 --PPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEK 137
PPP P PP P KP P GK + +A PP P P ++
Sbjct: 318 PPPPPGKPQGPP-PQGGNKP---QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPP-QQ 372
Query: 138 EGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPE 175
EG P P AP A P Q PP+
Sbjct: 373 EGNNPQGPPPPAGGNPQQPQAPPAGQP---QGPPRPPQ 407
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/90 (36%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 56 TSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPA-PLEKPIVLMKPR--EEGKGPVA 112
+S S+ I PP PPPP APPAPA P L P + K VA
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVA 263
Query: 113 VTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
+ G E T PP +PA PKG G P
Sbjct: 264 LNGRQA-EATRASPPRSPAEPKGSALGPNP 292
Score = 42.7 bits (99), Expect = 8e-04
Identities = 38/134 (28%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 2 SESGHSQPGLYGIERRRRWKEPGS--GGPQNLSGPGGRERDYIAPWERERRDASEETSTS 59
S G +PG YG + PG G PQ++S P G + + S
Sbjct: 123 SSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPG--------------GSPLPSPPS 168
Query: 60 VMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
P +L +PP S PPPP A P L P + P P A P
Sbjct: 169 TAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP 228
Query: 120 EGTAPPPPAAPAPP 133
P P APA P
Sbjct: 229 PPVPAPAPPAPASP 242
Score = 33.9 bits (76), Expect = 0.37
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAP 130
PPA P PP P APP P P P L ++ P T TP+ ++P P
Sbjct: 391 PPAPPLPPPAPPLPPPAPPLP-PAAPP--LPCAQKAAHPPAGFT--KTPKSSSPALKPKP 445
Query: 131 APPKGE 136
PP E
Sbjct: 446 NPPSPE 451
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 14/86 (16%)
Query: 79 PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKE 138
PPPP PA P P + +P G P+ +P TAPPPP P
Sbjct: 140 PPPPPGPAPGP-PQDISEP--------PGGSPLP-----SPPSTAPPPPPLLLEPPPPPS 185
Query: 139 GQRPTQPVYQIQNRGMGTAAPAAMDP 164
P PV + + ++P+ P
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTP 211
Score = 29.3 bits (64), Expect = 9.1
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVL-----------MKPRE 105
S V TP+ S P + +++ P A AP+ L P P
Sbjct: 301 SFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP 360
Query: 106 EGKGPVAVTGASTP----------EGTAPPPPAAPAPP 133
+ G + T ++P E PPPA P PP
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP 398
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/90 (36%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 56 TSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPA-PLEKPIVLMKPR--EEGKGPVA 112
+S S+ I PP PPPP APPAPA P L P + K VA
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVA 263
Query: 113 VTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
+ G E T PP +PA PKG G P
Sbjct: 264 LNGRQA-EATRASPPRSPAEPKGSALGPNP 292
Score = 42.7 bits (99), Expect = 8e-04
Identities = 38/134 (28%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 2 SESGHSQPGLYGIERRRRWKEPGS--GGPQNLSGPGGRERDYIAPWERERRDASEETSTS 59
S G +PG YG + PG G PQ++S P G + + S
Sbjct: 123 SSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPG--------------GSPLPSPPS 168
Query: 60 VMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
P +L +PP S PPPP A P L P + P P A P
Sbjct: 169 TAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP 228
Query: 120 EGTAPPPPAAPAPP 133
P P APA P
Sbjct: 229 PPVPAPAPPAPASP 242
Score = 33.9 bits (76), Expect = 0.37
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAP 130
PPA P PP P APP P P P L ++ P T TP+ ++P P
Sbjct: 391 PPAPPLPPPAPPLPPPAPPLP-PAAPP--LPCAQKAAHPPAGFT--KTPKSSSPALKPKP 445
Query: 131 APPKGE 136
PP E
Sbjct: 446 NPPSPE 451
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 14/86 (16%)
Query: 79 PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKE 138
PPPP PA P P + +P G P+ +P TAPPPP P
Sbjct: 140 PPPPPGPAPGP-PQDISEP--------PGGSPLP-----SPPSTAPPPPPLLLEPPPPPS 185
Query: 139 GQRPTQPVYQIQNRGMGTAAPAAMDP 164
P PV + + ++P+ P
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTP 211
Score = 29.3 bits (64), Expect = 9.1
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVL-----------MKPRE 105
S V TP+ S P + +++ P A AP+ L P P
Sbjct: 301 SFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP 360
Query: 106 EGKGPVAVTGASTP----------EGTAPPPPAAPAPP 133
+ G + T ++P E PPPA P PP
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP 398
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 45.4 bits (106), Expect = 1e-04
Identities = 33/90 (36%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 56 TSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPA-PLEKPIVLMKPR--EEGKGPVA 112
+S S+ I PP PPPP APPAPA P L P + K VA
Sbjct: 204 SSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVA 263
Query: 113 VTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
+ G E T PP +PA PKG G P
Sbjct: 264 LNGRQA-EATRASPPRSPAEPKGSALGPNP 292
Score = 42.7 bits (99), Expect = 8e-04
Identities = 38/134 (28%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 2 SESGHSQPGLYGIERRRRWKEPGS--GGPQNLSGPGGRERDYIAPWERERRDASEETSTS 59
S G +PG YG + PG G PQ++S P G + + S
Sbjct: 123 SSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPG--------------GSPLPSPPS 168
Query: 60 VMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTP 119
P +L +PP S PPPP A P L P + P P A P
Sbjct: 169 TAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP 228
Query: 120 EGTAPPPPAAPAPP 133
P P APA P
Sbjct: 229 PPVPAPAPPAPASP 242
Score = 33.9 bits (76), Expect = 0.37
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAP 130
PPA P PP P APP P P P L ++ P T TP+ ++P P
Sbjct: 391 PPAPPLPPPAPPLPPPAPPLP-PAAPP--LPCAQKAAHPPAGFT--KTPKSSSPALKPKP 445
Query: 131 APPKGE 136
PP E
Sbjct: 446 NPPSPE 451
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 14/86 (16%)
Query: 79 PPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKE 138
PPPP PA P P + +P G P+ +P TAPPPP P
Sbjct: 140 PPPPPGPAPGP-PQDISEP--------PGGSPLP-----SPPSTAPPPPPLLLEPPPPPS 185
Query: 139 GQRPTQPVYQIQNRGMGTAAPAAMDP 164
P PV + + ++P+ P
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTP 211
Score = 29.3 bits (64), Expect = 9.1
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 21/98 (21%)
Query: 57 STSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVL-----------MKPRE 105
S V TP+ S P + +++ P A AP+ L P P
Sbjct: 301 SFKVPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEP 360
Query: 106 EGKGPVAVTGASTP----------EGTAPPPPAAPAPP 133
+ G + T ++P E PPPA P PP
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPP 398
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 16/79 (20%)
Query: 72 PAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAV-----TGASTPEGTAPPP 126
P+ PPPP P PPAP P+ GPV + T P T PPP
Sbjct: 1952 PSSPETPPPPPPPPPLPPAP-----------PQPSSMGPVKIPNTVSTPLQAPPPTPPPP 2000
Query: 127 PAAPAPPKGEKEGQRPTQP 145
P P PP P+ P
Sbjct: 2001 PPPPPPPPPPPPPPPPSAP 2019
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 79 PPPPTAPAAPPAPA---PLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKG 135
PPPP P APP P+ P++ P + P + P P PPPP P PP
Sbjct: 1962 PPPPPLPPAPPQPSSMGPVKIPNTVSTPLQ---APPPTPPPPPPPPPPPPPPPPPPPPSA 2018
Query: 136 EKEGQRP 142
+ Q P
Sbjct: 2019 PPQVQLP 2025
Score = 37.0 bits (84), Expect = 0.044
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 52 ASEETSTSVMQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPV 111
A+ S+ TP+I S P E K P P PA P + P KP P+
Sbjct: 2332 AAPAASSGSGTSTPLIPSPKP-EPEKTSPKPEYPAEKPKQSDPSPPSQGTKPAL----PL 2386
Query: 112 AVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
A T + P+ + P P PPK + RP
Sbjct: 2387 ASTSSDPPQASTAQPQPQPQPPKQPQLIGRP 2417
Score = 32.0 bits (71), Expect = 1.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 68 LSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKP 103
L PP PPPP P PP P P P + P
Sbjct: 1990 LQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
Score = 31.6 bits (70), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 110 PVAVTGASTPEGTAPPPPAAPAPPKGEKEG 139
P++ + TP PPPP PAPP+ G
Sbjct: 1949 PISPSSPETPPPPPPPPPLPPAPPQPSSMG 1978
Score = 30.8 bits (68), Expect = 3.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKP 103
PP PPPP P P AP ++ P+ L P
Sbjct: 1999 PPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLP 2031
Score = 30.8 bits (68), Expect = 3.1
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPP 82
PG GP +L G P + TS+ + LS P + Q PPP
Sbjct: 3065 PGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSSPALS-----LSSAPTKPLLQTPPP 3119
Query: 83 TAPAAPPAPA 92
P PP P+
Sbjct: 3120 PPPPPPPPPS 3129
Score = 30.4 bits (67), Expect = 4.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 63 KTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKP 97
K P +S P PPPP P PP P P P
Sbjct: 1981 KIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPP 2015
Score = 29.3 bits (64), Expect = 9.1
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 71 PPAERSKQPPPPTAPAAPPAPAPLEKPI---VLMKP 103
PP PPPP+AP P L+ P+ ++M+P
Sbjct: 2005 PPPPPPPPPPPPSAPPQVQLPVSLDLPLFPSIMMQP 2040
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 45.1 bits (105), Expect = 2e-04
Identities = 41/162 (25%), Positives = 56/162 (34%), Gaps = 15/162 (9%)
Query: 13 GIERRRRWKEPGSGGPQNLSGPGGRERDY-------IAPWERERRDASEETSTSVMQKTP 65
G+E RRR E +G GP G D+ + P +D E S + P
Sbjct: 33 GVESRRRAGEGAAGRRDGGWGPPGGAGDHQTLQRASLLPGGSADKDQEREPSLAARGTAP 92
Query: 66 IILSKPPAERSKQPPPPTA----PAAPPAPAPLEKPIVLMK-PREEGKGPVAVTGASTPE 120
PP + P PP P PP P P L PR P + P
Sbjct: 93 ---PAPPRQCLPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPAPARTGPA 149
Query: 121 GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAM 162
G A P P G + + P+ P + + +G P A+
Sbjct: 150 GKAAADRGRPGPAAGRRVRRSPSFPPFLLAQTRLGRTGPLAL 191
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 45.1 bits (105), Expect = 2e-04
Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 20/142 (14%)
Query: 23 PGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSVMQKTPIILSKPPAERSKQPPPP 82
PG P G G D A W RE E T + Q +P+ SKP S P PP
Sbjct: 498 PGDRKPLYHYGRGMNPADKPA-WARE---VEERTRMNKQQNSPLAKSKPG---STGPEPP 550
Query: 83 TAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEKEGQRP 142
A+P P PL + + +P E +GP S P P A P+ + +P
Sbjct: 551 IPQASPGPPGPLSQTPPMQRPVEPQEGP----HKSLVAHRVPLKPYAAPVPRSQSLQDQP 606
Query: 143 TQPVYQIQNRGMGTAAPAAMDP 164
T+ + A PA+ DP
Sbjct: 607 TRNL---------AAFPASHDP 619
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,075,775
Number of Sequences: 37866
Number of extensions: 1491206
Number of successful extensions: 28428
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 1373
Number of HSP's that attempted gapping in prelim test: 13541
Number of HSP's gapped (non-prelim): 9341
length of query: 520
length of database: 18,247,518
effective HSP length: 107
effective length of query: 413
effective length of database: 14,195,856
effective search space: 5862888528
effective search space used: 5862888528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.