Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 145275183
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145275183 tripartite motif protein 34 isoform 3 [Homo
sapiens]
(270 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens] 550 e-157
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens] 524 e-149
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens] 524 e-149
gi|51477690 tripartite motif-containing 6 and tripartite motif-c... 524 e-149
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens] 328 4e-90
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens] 328 4e-90
gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo s... 325 3e-89
gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo s... 325 3e-89
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s... 322 3e-88
gi|117938316 tripartite motif-containing 22 [Homo sapiens] 321 5e-88
gi|15208660 tripartite motif protein 21 [Homo sapiens] 219 2e-57
gi|112421127 tripartite motif-containing 58 [Homo sapiens] 192 3e-49
gi|37622899 ring finger protein 137 [Homo sapiens] 186 2e-47
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 173 2e-43
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 160 8e-40
gi|5730009 ret finger protein [Homo sapiens] 155 4e-38
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa... 153 1e-37
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 153 1e-37
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 151 7e-37
gi|22749269 ring finger protein 129 [Homo sapiens] 149 2e-36
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi... 148 6e-36
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 148 6e-36
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 148 6e-36
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s... 142 2e-34
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 138 4e-33
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 137 1e-32
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 137 1e-32
gi|62865604 tripartite motif protein 31 [Homo sapiens] 137 1e-32
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 136 2e-32
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens] 135 4e-32
>gi|145275183 tripartite motif protein 34 isoform 3 [Homo sapiens]
Length = 270
Score = 550 bits (1417), Expect = e-157
Identities = 270/270 (100%), Positives = 270/270 (100%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG
Sbjct: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE
Sbjct: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER
Sbjct: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Query: 241 SQWSTMELLQDMSGIMKWCVWVARSGACEL 270
SQWSTMELLQDMSGIMKWCVWVARSGACEL
Sbjct: 241 SQWSTMELLQDMSGIMKWCVWVARSGACEL 270
>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 524 bits (1349), Expect = e-149
Identities = 259/262 (98%), Positives = 260/262 (99%), Gaps = 1/262 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG
Sbjct: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE
Sbjct: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER
Sbjct: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Query: 241 SQWSTMELLQDMSGIMKWC-VW 261
SQWSTMELLQDMSGIMKW +W
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIW 262
>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
Length = 488
Score = 524 bits (1349), Expect = e-149
Identities = 259/262 (98%), Positives = 260/262 (99%), Gaps = 1/262 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG
Sbjct: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE
Sbjct: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER
Sbjct: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR
Sbjct: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Query: 241 SQWSTMELLQDMSGIMKWC-VW 261
SQWSTMELLQDMSGIMKW +W
Sbjct: 241 SQWSTMELLQDMSGIMKWSEIW 262
>gi|51477690 tripartite motif-containing 6 and tripartite
motif-containing 34 [Homo sapiens]
Length = 842
Score = 524 bits (1349), Expect = e-149
Identities = 259/262 (98%), Positives = 260/262 (99%), Gaps = 1/262 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG
Sbjct: 355 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 414
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE
Sbjct: 415 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 474
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER
Sbjct: 475 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 534
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR
Sbjct: 535 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 594
Query: 241 SQWSTMELLQDMSGIMKWC-VW 261
SQWSTMELLQDMSGIMKW +W
Sbjct: 595 SQWSTMELLQDMSGIMKWSEIW 616
Score = 328 bits (840), Expect = 4e-90
Identities = 165/255 (64%), Positives = 199/255 (78%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
M S +L++++EEVTCPICLELLTEPLS+DCGHS C+ACIT + +E+V G+ SCPVC
Sbjct: 29 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 88
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
SY +L+ N+HLANIV RL+EV L P K LC HGEKL LFC+ED KVICWLCE
Sbjct: 89 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 148
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT L EEV +E QEK Q LK+LK EE+EAEKL A IRE+KTSWK Q++ ER
Sbjct: 149 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 208
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
RIQTEF+QLR+IL+ EQREL++LE+EEKK L EAE++LV Q Q +RELISD+E R
Sbjct: 209 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 268
Query: 241 SQWSTMELLQDMSGI 255
Q STMELLQD+S +
Sbjct: 269 CQGSTMELLQDVSDV 283
>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
Length = 488
Score = 328 bits (840), Expect = 4e-90
Identities = 165/255 (64%), Positives = 199/255 (78%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
M S +L++++EEVTCPICLELLTEPLS+DCGHS C+ACIT + +E+V G+ SCPVC
Sbjct: 1 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 60
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
SY +L+ N+HLANIV RL+EV L P K LC HGEKL LFC+ED KVICWLCE
Sbjct: 61 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 120
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT L EEV +E QEK Q LK+LK EE+EAEKL A IRE+KTSWK Q++ ER
Sbjct: 121 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 180
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
RIQTEF+QLR+IL+ EQREL++LE+EEKK L EAE++LV Q Q +RELISD+E R
Sbjct: 181 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 240
Query: 241 SQWSTMELLQDMSGI 255
Q STMELLQD+S +
Sbjct: 241 CQGSTMELLQDVSDV 255
>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
Length = 516
Score = 328 bits (840), Expect = 4e-90
Identities = 165/255 (64%), Positives = 199/255 (78%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
M S +L++++EEVTCPICLELLTEPLS+DCGHS C+ACIT + +E+V G+ SCPVC
Sbjct: 29 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQ 88
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
SY +L+ N+HLANIV RL+EV L P K LC HGEKL LFC+ED KVICWLCE
Sbjct: 89 TSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCE 148
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT L EEV +E QEK Q LK+LK EE+EAEKL A IRE+KTSWK Q++ ER
Sbjct: 149 RSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPER 208
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
RIQTEF+QLR+IL+ EQREL++LE+EEKK L EAE++LV Q Q +RELISD+E R
Sbjct: 209 CRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERR 268
Query: 241 SQWSTMELLQDMSGI 255
Q STMELLQD+S +
Sbjct: 269 CQGSTMELLQDVSDV 283
>gi|15011946 tripartite motif protein TRIM5 isoform delta [Homo
sapiens]
Length = 326
Score = 325 bits (833), Expect = 3e-89
Identities = 161/257 (62%), Positives = 206/257 (80%), Gaps = 2/257 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MAS IL+NV+EEVTCPICLELLT+PLSLDCGHS C+AC+T ++K+++ G +SSCPVC
Sbjct: 1 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG-ESSCPVCR 59
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISY E+++ N+H+ANIVE+L+EVKLSP+ G+K D C HGEKLLLFC+ED KVICWLCE
Sbjct: 60 ISYQPENIRPNRHVANIVEKLREVKLSPE-GQKVDHCARHGEKLLLFCQEDGKVICWLCE 118
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT LTEEV +E Q KLQA L+ L+++++EAE+LEADIREEK SWK Q+Q ++
Sbjct: 119 RSQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 178
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
+ +F+QLR IL+ EE ELQ LE+EE+ L +E E+VQQ Q +RELISD+E R
Sbjct: 179 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 238
Query: 241 SQWSTMELLQDMSGIMK 257
Q S MELLQ + G++K
Sbjct: 239 LQGSVMELLQGVDGVIK 255
>gi|15011944 tripartite motif protein TRIM5 isoform gamma [Homo
sapiens]
Length = 347
Score = 325 bits (833), Expect = 3e-89
Identities = 161/257 (62%), Positives = 206/257 (80%), Gaps = 2/257 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MAS IL+NV+EEVTCPICLELLT+PLSLDCGHS C+AC+T ++K+++ G +SSCPVC
Sbjct: 1 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG-ESSCPVCR 59
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISY E+++ N+H+ANIVE+L+EVKLSP+ G+K D C HGEKLLLFC+ED KVICWLCE
Sbjct: 60 ISYQPENIRPNRHVANIVEKLREVKLSPE-GQKVDHCARHGEKLLLFCQEDGKVICWLCE 118
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT LTEEV +E Q KLQA L+ L+++++EAE+LEADIREEK SWK Q+Q ++
Sbjct: 119 RSQEHRGHHTFLTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 178
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
+ +F+QLR IL+ EE ELQ LE+EE+ L +E E+VQQ Q +RELISD+E R
Sbjct: 179 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 238
Query: 241 SQWSTMELLQDMSGIMK 257
Q S MELLQ + G++K
Sbjct: 239 LQGSVMELLQGVDGVIK 255
>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
sapiens]
Length = 493
Score = 322 bits (824), Expect = 3e-88
Identities = 159/257 (61%), Positives = 205/257 (79%), Gaps = 2/257 (0%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
MAS IL+NV+EEVTCPICLELLT+PLSLDCGHS C+AC+T ++K+++ G +SSCPVC
Sbjct: 1 MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG-ESSCPVCR 59
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
ISY E+++ N+H+AN+VE+L+EVKLSP+ G+K D C HGEKLLLFC+ED KVICWLCE
Sbjct: 60 ISYQPENIRPNRHVANLVEKLREVKLSPE-GQKVDHCARHGEKLLLFCQEDGKVICWLCE 118
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
RSQEHRGHHT TEEV +E Q KLQA L+ L+++++EAE+LEADIREEK SWK Q+Q ++
Sbjct: 119 RSQEHRGHHTFPTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDK 178
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
+ +F+QLR IL+ EE ELQ LE+EE+ L +E E+VQQ Q +RELISD+E R
Sbjct: 179 TNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHR 238
Query: 241 SQWSTMELLQDMSGIMK 257
Q S MELLQ + G++K
Sbjct: 239 LQGSVMELLQGVDGVIK 255
>gi|117938316 tripartite motif-containing 22 [Homo sapiens]
Length = 498
Score = 321 bits (822), Expect = 5e-88
Identities = 154/257 (59%), Positives = 199/257 (77%)
Query: 1 MASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
M + +++++EVTCPICLELLTEPLSLDCGHS C+ACIT KE+V G+SSCPVC
Sbjct: 1 MDFSVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQ 60
Query: 61 ISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCE 120
+ +L+ N+HLANIVER+KEVK+SP G+KRD+C+HHG+KL +FCKED KVICW+CE
Sbjct: 61 TRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQIFCKEDGKVICWVCE 120
Query: 121 RSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTER 180
SQEH+GH T EV KECQEKLQ L+RL KE++EAEKLE DIR+E+T+WK +Q ER
Sbjct: 121 LSQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEKLEDDIRQERTAWKNYIQIER 180
Query: 181 QRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECR 240
Q+I F+++R IL+NEEQRELQ+LEE E LD A A D+LVQQ+Q LISD++ R
Sbjct: 181 QKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAAATDQLVQQRQDASTLISDLQRR 240
Query: 241 SQWSTMELLQDMSGIMK 257
+ S++E+LQD+ +MK
Sbjct: 241 LRGSSVEMLQDVIDVMK 257
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 219 bits (558), Expect = 2e-57
Identities = 112/253 (44%), Positives = 163/253 (64%), Gaps = 7/253 (2%)
Query: 1 MASKILLNVQ-EEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVC 59
MAS L + EEVTCPICL+ EP+S++CGHS C+ CI+ K GG S CPVC
Sbjct: 1 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGK------GGGSVCPVC 54
Query: 60 GISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLC 119
+ ++L+ N+ LAN+V LKE+ G + + C HGE+L LFC++D K +CW+C
Sbjct: 55 RQRFLLKNLRPNRQLANMVNNLKEISQEAREGTQGERCAVHGERLHLFCEKDGKALCWVC 114
Query: 120 ERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTE 179
+S++HR H V EE +E QEKLQ L L++++E AEKLE +I ++ WK V+T+
Sbjct: 115 AQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADWKKTVETQ 174
Query: 180 RQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVEC 239
+ RI EF Q ++ L EEQR+LQ LE++E++ L E E +L QQ Q ++ELIS+++
Sbjct: 175 KSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDR 234
Query: 240 RSQWSTMELLQDM 252
R S +ELLQ++
Sbjct: 235 RCHSSALELLQEV 247
>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
Length = 486
Score = 192 bits (487), Expect = 3e-49
Identities = 93/248 (37%), Positives = 150/248 (60%), Gaps = 2/248 (0%)
Query: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
++E+ CP+CL+ L EP+S+DCGHS C CI+ +++ + GG +CP C +
Sbjct: 10 LREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQCRGPFRPSGF 69
Query: 69 QANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH 128
+ N+ LA +VE ++ + L G +R C HGE L FC+ED +CW+C+ EHR H
Sbjct: 70 RPNRQLAGLVESVRRLGLGAGPGARR--CARHGEDLSRFCEEDEAALCWVCDAGPEHRTH 127
Query: 129 HTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFD 188
T +E Q KLQ L+ ++KE E+A EA++ ++ WK +V+ +RQR + EF+
Sbjct: 128 RTAPLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTVIWKEKVEMQRQRFRLEFE 187
Query: 189 QLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTMEL 248
+ R L EEQR+L+RLE EE+ TL + E++ LVQQ + ++EL +++ R Q + L
Sbjct: 188 KHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKELADELQERCQRPALGL 247
Query: 249 LQDMSGIM 256
L+ + G++
Sbjct: 248 LEGVRGVL 255
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 186 bits (471), Expect = 2e-47
Identities = 97/258 (37%), Positives = 148/258 (57%), Gaps = 10/258 (3%)
Query: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
+ EEV CPIC+ L EP+S+DCGHS C +C++ + S +CP+C +L
Sbjct: 10 IVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRNL 69
Query: 69 QANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRGH 128
+ N LAN+VE+++ ++L P G K DLC+ HGEKL +FCKED ++C C +S EH H
Sbjct: 70 RPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEHEAH 129
Query: 129 HTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEFD 188
V E+V E + +L L+ LKKE+EEA KLE R+ +WK QV+T +Q I EF+
Sbjct: 130 SVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETRKQSIVWEFE 189
Query: 189 QLRSILNN----------EEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVE 238
+ + +L E L L+ E +T+ K EL+QQ Q++ +I++++
Sbjct: 190 KYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQVLWRMIAELK 249
Query: 239 CRSQWSTMELLQDMSGIM 256
RSQ +LQD+ ++
Sbjct: 250 ERSQRPVRWMLQDIQEVL 267
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 173 bits (438), Expect = 2e-43
Identities = 92/266 (34%), Positives = 151/266 (56%), Gaps = 11/266 (4%)
Query: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSS--CPVCGISYSFE 66
+ EE TC ICL L+T P+S++CGHS C CIT K + + CP C + +
Sbjct: 10 MMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMD 69
Query: 67 HLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHR 126
L+ N+ L +++E LKE C+ HGE+ LFC+++ ++ICW CER+ +H+
Sbjct: 70 SLRPNKQLGSLIEALKETDQEMS-------CEEHGEQFHLFCEDEGQLICWRCERAPQHK 122
Query: 127 GHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTE 186
GH T L E+V + +EKLQ + +LK+ E+ + + T WK +VQ +RQ+I+++
Sbjct: 123 GHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRITKWKEKVQIQRQKIRSD 182
Query: 187 FDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTM 246
F L+ L+ EE+ L RLE+EE++TL + + E L + ++ I ++E + Q S
Sbjct: 183 FKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNELKSHILELEEKCQGSAQ 242
Query: 247 ELLQDMSGIM--KWCVWVARSGACEL 270
+LLQ+++ + W V + S A L
Sbjct: 243 KLLQNVNDTLSRSWAVKLETSEAVSL 268
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 160 bits (406), Expect = 8e-40
Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 6/256 (2%)
Query: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGI 61
A + N+QEE TC ICL+ T+P+ DCGH+ CR CI + G +CP C
Sbjct: 3 APDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECI----RRCWGQPEGPYACPECRE 58
Query: 62 SYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCER 121
+L+ N+ LA + E + +L P + + +C H E L FC ++ +++C CER
Sbjct: 59 LSPQRNLRPNRPLAKMAEMAR--RLHPPSPVPQGVCPAHREPLAAFCGDELRLLCAACER 116
Query: 122 SQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQ 181
S EH H ++ ++ + KL+ L+ L+K+ ++A +A E W+ V+++RQ
Sbjct: 117 SGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQ 176
Query: 182 RIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRS 241
+ EF++LR +L EEQ+ LQRLEEEE + L + E L QQ + ELI+++E R
Sbjct: 177 NVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRC 236
Query: 242 QWSTMELLQDMSGIMK 257
Q + LLQD+ ++
Sbjct: 237 QLPALGLLQDIKDALR 252
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 155 bits (392), Expect = 4e-38
Identities = 84/246 (34%), Positives = 138/246 (56%), Gaps = 6/246 (2%)
Query: 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHL 68
+Q+E TCP+CL+ EP+ LDCGH++C AC+ A T++ SCP C ++ H+
Sbjct: 10 LQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNV----SCPQCRETFPQRHM 65
Query: 69 QANQHLANIVERLKEVKLSPDNGKKRDL--CDHHGEKLLLFCKEDRKVICWLCERSQEHR 126
+ N+HLAN+ + +K+++ +G ++ C+ H E L L+C+ED+ IC +C+RS+EHR
Sbjct: 66 RPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDRSREHR 125
Query: 127 GHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTE 186
GH + EE + +E++Q L LK+ ++ ++ A + + Q ER++I E
Sbjct: 126 GHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMEREKIVWE 185
Query: 187 FDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTM 246
F+QL L E R L RLEE + + A + + LI+ +E + Q T
Sbjct: 186 FEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQQQPTR 245
Query: 247 ELLQDM 252
ELLQD+
Sbjct: 246 ELLQDI 251
>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
sapiens]
Length = 474
Score = 153 bits (387), Expect = 1e-37
Identities = 86/249 (34%), Positives = 139/249 (55%), Gaps = 7/249 (2%)
Query: 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67
++QEE+TCPICL+ +P+S++CGH+ CR C+ + GG CP C +
Sbjct: 5 DIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPG----GGPFPCPECRHPSAPAA 60
Query: 68 LQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRG 127
L+ N LA + E+ + +L P LC H E L LFC++D++ +C +C SQEH+
Sbjct: 61 LRPNWALARLTEKTQRRRLGP---VPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQT 117
Query: 128 HHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTEF 187
H +E F+ +EKL + L + ++ L+ + T WK +++++R RI TEF
Sbjct: 118 HAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEF 177
Query: 188 DQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTME 247
+L + L EE LQRL +EE++T K E +L Q +++LI +V +SQ T+E
Sbjct: 178 SKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPTLE 237
Query: 248 LLQDMSGIM 256
LLQ+ ++
Sbjct: 238 LLQNPKEVL 246
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 153 bits (387), Expect = 1e-37
Identities = 83/254 (32%), Positives = 142/254 (55%), Gaps = 4/254 (1%)
Query: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
L N+Q E +C +CLE L EP+ ++CGH+ C+ACIT ++ CPVC + +
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDF----PCPVCRKTSRY 75
Query: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 125
L+ N+ L ++VE K+++ + LC H E L LFC ED++ +C +C S H
Sbjct: 76 RSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTH 135
Query: 126 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 185
R H V ++ +E +EKLQ L+ L+++ +E + ++ ++ K V++ RQ+I
Sbjct: 136 RAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILR 195
Query: 186 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWST 245
EF++L L+ E+Q L RLEEEE+ L + E L +++ + L ++VE + S
Sbjct: 196 EFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSG 255
Query: 246 MELLQDMSGIMKWC 259
E+L+D+ ++ C
Sbjct: 256 FEMLKDVKSTLEKC 269
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 151 bits (381), Expect = 7e-37
Identities = 82/252 (32%), Positives = 141/252 (55%), Gaps = 4/252 (1%)
Query: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
L N+Q E +C +CLE L EP+ ++CGH+ C+ACIT ++ CPVC + +
Sbjct: 20 LENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDF----PCPVCRKTSRY 75
Query: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEH 125
L+ N+ L ++VE K+++ + LC H E L LFC ED++ +C +C S H
Sbjct: 76 RSLRPNRQLGSMVEIAKQLQAVKRKIRDESLCPQHHEALSLFCYEDQEAVCLICAISHTH 135
Query: 126 RGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQT 185
R H V ++ +E +EKLQ L+ L+++ +E + ++ ++ K V++ RQ+I
Sbjct: 136 RAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQILR 195
Query: 186 EFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWST 245
EF++L L+ E+Q L RLEEEE+ L + E L +++ + L ++VE + S
Sbjct: 196 EFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRRDLAHLAAEVEGKCLQSG 255
Query: 246 MELLQDMSGIMK 257
E+L+D+ ++
Sbjct: 256 FEMLKDVKSTLE 267
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 149 bits (377), Expect = 2e-36
Identities = 78/247 (31%), Positives = 141/247 (57%), Gaps = 7/247 (2%)
Query: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
L+N+QEE +CPICLE L +P++++CGH+ CR+C++VS K+ + CPVC + +
Sbjct: 7 LVNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKD----LDDTFPCPVCRFCFPY 62
Query: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRD---LCDHHGEKLLLFCKEDRKVICWLCERS 122
+ + N L N+ E K++++ K++ +C+ H + L LFC +D +++C C S
Sbjct: 63 KSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCSFS 122
Query: 123 QEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQR 182
+H+ H+ ++ +E L+ L+ L+ E EK+ + K +V+ +R+
Sbjct: 123 TKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKREE 182
Query: 183 IQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQ 242
I +EF+Q+R L NE++ L+++++EE L K E EL ++ L+ +VE +S
Sbjct: 183 INSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLREVEGKSV 242
Query: 243 WSTMELL 249
S +ELL
Sbjct: 243 QSNLELL 249
>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
sapiens]
Length = 343
Score = 148 bits (373), Expect = 6e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
Query: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
Query: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
Query: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
Query: 237 VECRSQWSTMELLQDM 252
+E RS +++LQDM
Sbjct: 239 LEERSTQGPLQMLQDM 254
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 148 bits (373), Expect = 6e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
Query: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
Query: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
Query: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
Query: 237 VECRSQWSTMELLQDM 252
+E RS +++LQDM
Sbjct: 239 LEERSTQGPLQMLQDM 254
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 148 bits (373), Expect = 6e-36
Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 9/256 (3%)
Query: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-----GKSSC 56
A ++ +QEE TC ICL+ T+P+ CGH+ CRACI +S ++A G G C
Sbjct: 3 AVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPC 62
Query: 57 PVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVIC 116
P C +L N+ L + E ++ +K+DLC H E L LFC++D+ IC
Sbjct: 63 PECREMSPQRNLLPNRLLTKVAEMAQQ----HPGLQKQDLCQEHHEPLKLFCQKDQSPIC 118
Query: 117 WLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQV 176
+C S+EHR H + EE + + KL+ ++ L+++ L+A + W+ +V
Sbjct: 119 VVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKV 178
Query: 177 QTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISD 236
+ R+RI EF+++ L EEQR LQ LE EE++T + E+ L +Q + L+
Sbjct: 179 KERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQ 238
Query: 237 VECRSQWSTMELLQDM 252
+E RS +++LQDM
Sbjct: 239 LEERSTQGPLQMLQDM 254
>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
sapiens]
Length = 500
Score = 142 bits (359), Expect = 2e-34
Identities = 88/275 (32%), Positives = 143/275 (52%), Gaps = 33/275 (12%)
Query: 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67
++QEE+TCPICL+ +P+S++CGH+ CR C+ + GG CP C +
Sbjct: 5 DIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPG----GGPFPCPECRHPSAPAA 60
Query: 68 LQANQHLANIVERLKEVKLSPDNGKKRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHRG 127
L+ N LA + E+ + +L P LC H E L LFC++D++ +C +C SQEH+
Sbjct: 61 LRPNWALARLTEKTQRRRLGP---VPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQT 117
Query: 128 HHTVLTEEVFK------------ECQEKLQAVLKRLKKEEEEAEKLEADIR--------- 166
H +E F+ E + +L +L K+EE+ K + ++
Sbjct: 118 HAMAPIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHSKQEEKLLKSQRNLVAKMKKVMHL 177
Query: 167 -----EEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAED 221
+ T WK +++++R RI TEF +L + L EE LQRL +EE++T K E
Sbjct: 178 QDVEVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTL 237
Query: 222 ELVQQKQLVRELISDVECRSQWSTMELLQDMSGIM 256
+L Q +++LI +V +SQ T+ELLQ+ ++
Sbjct: 238 KLNQTIASLKKLILEVGEKSQAPTLELLQNPKEVL 272
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 138 bits (348), Expect = 4e-33
Identities = 74/250 (29%), Positives = 133/250 (53%), Gaps = 7/250 (2%)
Query: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
L +Q E C ICL+ L++P++++CGH+ CR+CI +++ + CPVC
Sbjct: 7 LTGLQAEAKCSICLDYLSDPVTIECGHNFCRSCI----QQSWLDLQELFPCPVCRHQCQE 62
Query: 66 EHLQANQHLANIVERLKEVKLSPDNGKKRD---LCDHHGEKLLLFCKEDRKVICWLCERS 122
H ++N L ++E K ++ + N +K++ LC+ H + L +FCKED V+C LC +
Sbjct: 63 GHFRSNTQLGRMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKEDLMVLCPLCTQP 122
Query: 123 QEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQR 182
+H+GHH E+ +++ + ++ LKK+ + +KL + ++ + V+ +RQ
Sbjct: 123 PDHQGHHVRPIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPLELREMVENQRQE 182
Query: 183 IQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQ 242
+ +EF+ L L+ E+Q L RL EEEK K + ++ +S V S+
Sbjct: 183 LSSEFEHLNQFLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVVELSE 242
Query: 243 WSTMELLQDM 252
S +ELL +
Sbjct: 243 LSELELLSQI 252
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 137 bits (345), Expect = 1e-32
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 1/253 (0%)
Query: 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67
++ +EV CPIC L EP+++DCGH+ CRAC+T + + +CP+C +
Sbjct: 9 SLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGS 68
Query: 68 LQANQHLANIVERLKEVKLSPDNGK-KRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHR 126
+ N LAN+VE ++ ++L G + D+C HGEK+ FC++D +C +C + EH
Sbjct: 69 FRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHA 128
Query: 127 GHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTE 186
H E+ +E++ LK L+KE EE +++++ + QV T+RQ++ +E
Sbjct: 129 THTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISE 188
Query: 187 FDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTM 246
F LR L ++ L +LE ++ L + E + + + LI ++E +++
Sbjct: 189 FAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEEKNERPAR 248
Query: 247 ELLQDMSGIMKWC 259
ELL D+ + C
Sbjct: 249 ELLTDIRSTLIRC 261
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 137 bits (345), Expect = 1e-32
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 1/253 (0%)
Query: 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67
++ +EV CPIC L EP+++DCGH+ CRAC+T + + +CP+C +
Sbjct: 9 SLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGS 68
Query: 68 LQANQHLANIVERLKEVKLSPDNGK-KRDLCDHHGEKLLLFCKEDRKVICWLCERSQEHR 126
+ N LAN+VE ++ ++L G + D+C HGEK+ FC++D +C +C + EH
Sbjct: 69 FRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVVCREAGEHA 128
Query: 127 GHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQTERQRIQTE 186
H E+ +E++ LK L+KE EE +++++ + QV T+RQ++ +E
Sbjct: 129 THTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVSTKRQQVISE 188
Query: 187 FDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELISDVECRSQWSTM 246
F LR L ++ L +LE ++ L + E + + + LI ++E +++
Sbjct: 189 FAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELEEKNERPAR 248
Query: 247 ELLQDMSGIMKWC 259
ELL D+ + C
Sbjct: 249 ELLTDIRSTLIRC 261
>gi|62865604 tripartite motif protein 31 [Homo sapiens]
Length = 425
Score = 137 bits (344), Expect = 1e-32
Identities = 83/262 (31%), Positives = 142/262 (54%), Gaps = 24/262 (9%)
Query: 1 MASKILLN-VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVC 59
MAS +N +QEEV CPICL++L +P+++DCGH+ C CIT + + G CP+C
Sbjct: 1 MASGQFVNKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSC----GFFKCPLC 56
Query: 60 GISYSFEHLQANQHLANIVERLKEVKLSPDNGKKRDL-CDHHGEKLLLFCKEDRKVICWL 118
S ++ N L N+VE+++ ++ S K+++ C H E FC++D K +C++
Sbjct: 57 KTSVRKNAIRFNSLLRNLVEKIQALQASEVQSKRKEATCPRHQEMFHYFCEDDGKFLCFV 116
Query: 119 CERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQVQT 178
C S++H+ H+ L EE + Q ++Q ++ L+++E+E +++A + QV+
Sbjct: 117 CRESKDHKSHNVSLIEEAAQNYQGQIQEQIQVLQQKEKETVQVKAQGVHRVDVFTDQVEH 176
Query: 179 ERQRIQTEFDQLRSILNNEEQRELQRL----EEEEKKTLDKFAEAEDELVQQKQLV---- 230
E+QRI TEF+ L +L E+ L R+ E + A E +L K+LV
Sbjct: 177 EKQRILTEFELLHQVLEEEKNFLLSRIYWLGHEGTEAGKHYVASTEPQLNDLKKLVDSLK 236
Query: 231 -------RELISDVE---CRSQ 242
R+L+ D++ CRS+
Sbjct: 237 TKQNMPPRQLLEDIKVVLCRSE 258
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 136 bits (343), Expect = 2e-32
Identities = 76/256 (29%), Positives = 142/256 (55%), Gaps = 16/256 (6%)
Query: 6 LLNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65
L +++EEVTC ICL+ L +P+++DCGH CR+C T + G + CP+C +
Sbjct: 7 LRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTT----DVRPISGSRPVCPLCKKPFKK 62
Query: 66 EHLQANQHLANIVERLKEVKLSPDNGKK----------RDLCDHHGEKLLLFCKEDRKVI 115
E+++ LA++VE ++ +K+ D G++ LC+ H EKL +C++D K++
Sbjct: 63 ENIRPVWQLASLVENIERLKV--DKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL 120
Query: 116 CWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTSWKYQ 175
C +C S+EHR H VL E+ + +EK+ L L+++ ++ + +A + + +
Sbjct: 121 CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK 180
Query: 176 VQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVRELIS 235
+Q +RQ I EF+Q L E+ L++L + E++ + + + V + + +IS
Sbjct: 181 LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS 240
Query: 236 DVECRSQWSTMELLQD 251
++E ++Q EL+QD
Sbjct: 241 ELEGKAQQPAAELMQD 256
>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
Length = 511
Score = 135 bits (340), Expect = 4e-32
Identities = 84/277 (30%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 2 ASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACI-TVSNKEAVTSMGGKSS----- 55
A + +Q E TC ICLEL EP+S++CGHS CRACI + S+G +
Sbjct: 16 ALALAAELQGEATCSICLELFREPVSVECGHSFCRACIGRCWERPGAGSVGAATRAPPFP 75
Query: 56 --CPVCGISYSFEHLQANQHLANIVERLKEVKLSP----DNGKKRDL-------CDHHGE 102
CP C L+ N+ LA + L+ L ++G + C HGE
Sbjct: 76 LPCPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAARAAAARCGQHGE 135
Query: 103 KLLLFCKEDRKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLE 162
L+C++D + IC +C+R++EHR H + +E +E +E L++ L+ LKKE E+ E
Sbjct: 136 PFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRVLKKELEDCEVFR 195
Query: 163 ADIREEKTSWKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDE 222
+ ++E Q+ E++++ EF LR+ L +E R L RLEE ++ K E +
Sbjct: 196 STEKKESKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSREVAQKQNENLAQ 255
Query: 223 LVQQKQLVRELISDVECRSQWSTMELLQDMSGIMKWC 259
L + + +L S ++ +Q ++ LQ+ + C
Sbjct: 256 LGVEITQLSKLSSQIQETAQKPDLDFLQEFKSTLSRC 292
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,811,332
Number of Sequences: 37866
Number of extensions: 514744
Number of successful extensions: 10160
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 818
Number of HSP's that attempted gapping in prelim test: 4639
Number of HSP's gapped (non-prelim): 4183
length of query: 270
length of database: 18,247,518
effective HSP length: 101
effective length of query: 169
effective length of database: 14,423,052
effective search space: 2437495788
effective search space used: 2437495788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.