PHF5A 3929

Name: PHF5A	Sequence: fasta or formatted (110aa)		NCBI GI: 14249398
Description: PHD-finger 5A		Referenced in: PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 4 1 C cysteine 11.8 13 1 D aspartate 7.3 8 1 E glutamate 4.5 5 1 F phenylalanine 2.7 3 1 G glycine 10.0 11 2 H histidine 1.8 2 2 I isoleucine 6.4 7 1 K lysine 10.9 12 2 L leucine 4.5 5 1 M methionine 0.9 1 1 N asparagine 1.8 2 1 P proline 3.6 4 1 Q glutamine 2.7 3 1 R arginine 7.3 8 1 S serine 4.5 5 2 T threonine 2.7 3 1 V valine 6.4 7 1 W tryptophan 0.0 0 0 Y tyrosine 6.4 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PHD-finger 5A LAMB4 0.045 laminin, beta 4 LRRK2 0.036 leucine-rich repeat kinase 2 MLL2 0.032 myeloid/lymphoid or mixed-lineage leukemia 2 DEF8 0.023 differentially expressed in FDCP 8 isoform 1 LAMB2 0.018 laminin, beta 2 precursor TNXB 0.018 tenascin XB isoform 1 precursor LOC100292811 0.014 PREDICTED: similar to proprotein convertase subtili... LAMA2 0.014 laminin alpha 2 subunit isoform b precursor LAMA2 0.014 laminin alpha 2 subunit isoform a precursor HSCB 0.014 J-type co-chaperone HSC20 LOC100290671 0.014 PREDICTED: hypothetical protein XP_002347099 LOC100289618 0.014 PREDICTED: hypothetical protein XP_002342982 JUB 0.014 ajuba isoform 2 JUB 0.014 ajuba isoform 1 LAMA5 0.014 laminin alpha 5 KIAA1409 0.014 hypothetical protein LOC57578 PCSK5 0.014 proprotein convertase subtilisin/kexin type 5 prepro... PRDM14 0.014 PR domain containing 14 HSPG2 0.009 heparan sulfate proteoglycan 2 GPR115 0.009 G-protein coupled receptor 115 C3orf32 0.009 hypothetical protein LOC51066 TGFBR2 0.009 transforming growth factor, beta receptor II isoform... TGFBR2 0.009 transforming growth factor, beta receptor II isoform... GCM1 0.009 glial cells missing homolog a MLL3 0.009 myeloid/lymphoid or mixed-lineage leukemia 3 ZNFX1 0.009 zinc finger, NFX1-type containing 1 F12 0.009 coagulation factor XII precursor HAPLN1 0.009 hyaluronan and proteoglycan link protein 1 SYTL4 0.009 synaptotagmin-like 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.