Guide to the Human Genome
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Name: KIAA1409 Sequence: fasta or formatted (2458aa) NCBI GI: 150456444
Description:

hypothetical protein LOC57578

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7        165           3
 C cysteine            3.2         78           2
 D aspartate           4.9        121           3
 E glutamate           6.8        167           4
 F phenylalanine       4.1        102           2
 G glycine             4.0         98           2
 H histidine           3.1         77           2
 I isoleucine          5.3        131           2
 K lysine              5.3        130           3
 L leucine            12.0        295           4
 M methionine          2.9         71           2
 N asparagine          4.0         98           2
 P proline             6.3        155           3
 Q glutamine           4.8        117           2
 R arginine            4.4        107           3
 S serine              9.4        230           3
 T threonine           4.5        111           2
 V valine              5.4        132           2
 W tryptophan          1.1         27           1
 Y tyrosine            1.9         46           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57578 
ACRC                  0.005   ACRC protein 
CMYA5                 0.004   cardiomyopathy associated 5 
CCNT2                 0.004   cyclin T2 isoform b 
BNIPL                 0.003   BCL2/adenovirus E1B 19kD interacting protein like i...
DSPP                  0.003   dentin sialophosphoprotein preproprotein 
CCNT2                 0.003   cyclin T2 isoform a 
GTF2F1                0.003   general transcription factor IIF, polypeptide 1, 74...
C1orf113              0.003   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.003   SH3 domain-containing protein C1orf113 isoform 2 [H...
MYT1                  0.003   myelin transcription factor 1 
TNRC18                0.003   trinucleotide repeat containing 18 
SLC24A1               0.003   solute carrier family 24 (sodium/potassium/calcium ex...
NEFH                  0.003   neurofilament, heavy polypeptide 200kDa 
MAP1A                 0.003   microtubule-associated protein 1A 
NUMA1                 0.003   nuclear mitotic apparatus protein 1 
THRAP3                0.003   thyroid hormone receptor associated protein 3 [Homo...
ZMYND8                0.003   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.003   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.003   zinc finger, MYND-type containing 8 isoform b 
POLE3                 0.003   DNA-directed DNA polymerase epsilon 3 
MAGEE1                0.003   melanoma antigen family E, 1 
AHNAK2                0.003   AHNAK nucleoprotein 2 
GPR64                 0.002   G protein-coupled receptor 64 isoform 3 
GPR64                 0.002   G protein-coupled receptor 64 isoform 2 
GPR64                 0.002   G protein-coupled receptor 64 isoform 1 
GPR64                 0.002   G protein-coupled receptor 64 isoform 4 
ROBO1                 0.002   roundabout 1 isoform d 
ROBO1                 0.002   roundabout 1 isoform c 
ROBO1                 0.002   roundabout 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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