HSCB 31400

Name: HSCB	Sequence: fasta or formatted (235aa)		NCBI GI: 50301234
Description: J-type co-chaperone HSC20		Referenced in: Heat-Shock Proteins and Chaperonins Iron, Copper, and Arsenic Metabolism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.2 17 2 C cysteine 2.6 6 1 D aspartate 6.0 14 2 E glutamate 8.9 21 2 F phenylalanine 5.5 13 2 G glycine 4.7 11 2 H histidine 1.7 4 1 I isoleucine 4.7 11 1 K lysine 6.8 16 2 L leucine 8.9 21 2 M methionine 2.6 6 1 N asparagine 3.0 7 1 P proline 5.5 13 1 Q glutamine 5.1 12 2 R arginine 8.5 20 3 S serine 6.4 15 2 T threonine 3.8 9 1 V valine 3.0 7 1 W tryptophan 2.1 5 1 Y tyrosine 3.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 J-type co-chaperone HSC20 DCTN1 0.019 dynactin 1 isoform 4 DCTN1 0.019 dynactin 1 isoform 3 DCTN1 0.019 dynactin 1 isoform 2 DCTN1 0.019 dynactin 1 isoform 1 PXN 0.017 paxillin isoform 3 PXN 0.017 paxillin isoform 2 PXN 0.017 paxillin isoform 1 DNAJB2 0.017 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... DNAJB2 0.017 DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ... MCM3 0.017 minichromosome maintenance complex component 3 TAF7L 0.015 TATA box binding protein-associated factor, RNA poly... DLG4 0.013 post-synaptic density protein 95 isoform 1 DLG4 0.013 post-synaptic density protein 95 isoform 2 KIAA1804 0.013 mixed lineage kinase 4 NT5DC2 0.013 5'-nucleotidase domain containing 2 isoform 1 [Homo... FAM129A 0.011 niban protein isoform 2 DNAJC25-GNG10 0.011 DNAJC25-GNG10 protein DNAJA3 0.011 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... DNAJA3 0.011 DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... DNAJC25 0.011 DnaJ (Hsp40) homolog, subfamily C , member 25 [Homo... UBTFL1 0.011 upstream binding transcription factor, RNA polymera... LOC100133716 0.011 PREDICTED: hypothetical protein ZFC3H1 0.011 proline/serine-rich coiled-coil 2 ARGLU1 0.011 arginine and glutamate rich 1 TAF4 0.009 TBP-associated factor 4 CENPF 0.009 centromere protein F SSPO 0.009 SCO-spondin SERPINI1 0.006 neuroserpin precursor SERPINI1 0.006 neuroserpin precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.