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Search of human proteins with 14165282
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14165282 prokineticin 1 [Homo sapiens]
(105 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14165282 prokineticin 1 [Homo sapiens] 231 9e-62
gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens] 121 1e-28
gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens] 108 7e-25
gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] 45 1e-05
gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] 40 3e-04
gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 40 5e-04
gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 40 5e-04
gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 40 5e-04
gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 39 0.001
gi|154937359 cysteine-rich PAK1 inhibitor [Homo sapiens] 32 0.11
gi|93102379 low density lipoprotein-related protein 1B precursor... 30 0.31
gi|40317628 thrombospondin 2 precursor [Homo sapiens] 30 0.41
gi|55743080 ADAM metallopeptidase domain 2 proprotein [Homo sapi... 30 0.53
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 29 0.69
gi|148833508 notch1 preproprotein [Homo sapiens] 29 0.90
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 29 0.90
gi|4502895 colipase preproprotein [Homo sapiens] 28 1.2
gi|143770880 laminin, beta 4 [Homo sapiens] 28 1.5
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 28 1.5
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 28 1.5
gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens] 28 1.5
gi|239740845 PREDICTED: hypothetical protein XP_002344070 [Homo ... 28 2.0
gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens] 28 2.0
gi|4504151 granulin precursor [Homo sapiens] 27 2.6
gi|239754813 PREDICTED: hypothetical protein [Homo sapiens] 27 2.6
gi|239749342 PREDICTED: hypothetical protein XP_002347001 [Homo ... 27 2.6
gi|239743430 PREDICTED: hypothetical protein XP_002342854 [Homo ... 27 2.6
gi|40317626 thrombospondin 1 precursor [Homo sapiens] 27 4.5
gi|116284392 mucin 2 precursor [Homo sapiens] 27 4.5
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 27 4.5
>gi|14165282 prokineticin 1 [Homo sapiens]
Length = 105
Score = 231 bits (589), Expect = 9e-62
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 1 MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC 60
MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC
Sbjct: 1 MRGATRVSIMLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC 60
Query: 61 HPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF 105
HPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF
Sbjct: 61 HPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYRCSMDLKNINF 105
>gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens]
Length = 108
Score = 121 bits (303), Expect = 1e-28
Identities = 48/87 (55%), Positives = 63/87 (72%)
Query: 10 MLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPF 69
+LL D AVITGAC++D QCG G CCA+S+W++ +R+CTP+G+ G+ CHP + KVPF
Sbjct: 18 LLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKVPF 77
Query: 70 FRKRKHHTCPCLPNLLCSRFPDGRYRC 96
F +R HHTCPCLP L C R R+ C
Sbjct: 78 FGRRMHHTCPCLPGLACLRTSFNRFIC 104
>gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens]
Length = 129
Score = 108 bits (271), Expect = 7e-25
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 21/108 (19%)
Query: 10 MLLLVTVSDCAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHK--- 66
+LL D AVITGAC++D QCG G CCA+S+W++ +R+CTP+G+ G+ CHP + K
Sbjct: 18 LLLTPRAGDAAVITGACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKNNF 77
Query: 67 ------------------VPFFRKRKHHTCPCLPNLLCSRFPDGRYRC 96
VPFF +R HHTCPCLP L C R R+ C
Sbjct: 78 GNGRQERRKRKRSKRKKEVPFFGRRMHHTCPCLPGLACLRTSFNRFIC 125
>gi|7657025 dickkopf homolog 4 precursor [Homo sapiens]
Length = 224
Score = 45.1 bits (105), Expect = 1e-05
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 25 ACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNL 84
+C R CG G CCA W ++C P+ EG+ C HK C C P L
Sbjct: 144 SCLRTFDCGPGLCCARHFW---TKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGL 200
Query: 85 LC 86
LC
Sbjct: 201 LC 202
>gi|7657023 dickkopf homolog 2 precursor [Homo sapiens]
Length = 259
Score = 40.4 bits (93), Expect = 3e-04
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 12/73 (16%)
Query: 26 CERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC----HPGSHKVPFFRKRKHHTCPCL 81
C R C G CCA W ++C P+ +GE C GSH + F++ C C
Sbjct: 183 CLRSSDCIEGFCCARHFW---TKICKPVLHQGEVCTKQRKKGSHGLEIFQR-----CDCA 234
Query: 82 PNLLCSRFPDGRY 94
L C + D Y
Sbjct: 235 KGLSCKVWKDATY 247
>gi|66346689 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 26 CERDVQCGAGTCCAISLWLRGLR--MCTPLGREGEECH-PGSHKVPFFRKRKH-----HT 77
C+ C G CCA RGL +CTPL EGE CH P S +
Sbjct: 208 CDNQRDCQPGLCCAFQ---RGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
Query: 78 CPCLPNLLC 86
CPC LLC
Sbjct: 265 CPCASGLLC 273
>gi|40548393 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 26 CERDVQCGAGTCCAISLWLRGLR--MCTPLGREGEECH-PGSHKVPFFRKRKH-----HT 77
C+ C G CCA RGL +CTPL EGE CH P S +
Sbjct: 208 CDNQRDCQPGLCCAFQ---RGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
Query: 78 CPCLPNLLC 86
CPC LLC
Sbjct: 265 CPCASGLLC 273
>gi|40548389 dickkopf homolog 3 precursor [Homo sapiens]
Length = 350
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 26 CERDVQCGAGTCCAISLWLRGLR--MCTPLGREGEECH-PGSHKVPFFRKRKH-----HT 77
C+ C G CCA RGL +CTPL EGE CH P S +
Sbjct: 208 CDNQRDCQPGLCCAFQ---RGLLFPVCTPLPVEGELCHDPASRLLDLITWELEPDGALDR 264
Query: 78 CPCLPNLLC 86
CPC LLC
Sbjct: 265 CPCASGLLC 273
>gi|7110719 dickkopf homolog 1 precursor [Homo sapiens]
Length = 266
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
Query: 26 CERDVQCGAGTCCAISLWLRGLRMCTPLGREGEEC----HPGSHKVPFFRKRKHHTCPCL 81
C R C +G CCA W ++C P+ +EG+ C GSH + F++ C C
Sbjct: 189 CLRSSDCASGLCCARHFW---SKICKPVLKEGQVCTKHRRKGSHGLEIFQR-----CYCG 240
Query: 82 PNLLC 86
L C
Sbjct: 241 EGLSC 245
>gi|154937359 cysteine-rich PAK1 inhibitor [Homo sapiens]
Length = 446
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 25 ACERDVQCGAGTCCAISLW-----LRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTCP 79
AC +CG C + +W R C P P +H P HTCP
Sbjct: 331 ACSHTCRCGVPACSHVPMWSARLLTRAHVECPPAHTRAHVECPPAHTCPCGVPACSHTCP 390
Query: 80 C 80
C
Sbjct: 391 C 391
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
Query: 18 DCAVITGACERDVQCGAGTCCAISLWLRGLRMCTP---LGREGEECHPGSHKVPFFRKRK 74
DC G E D CGA TC A +G R C P L +C GS ++
Sbjct: 2744 DCG--DGLDESDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDEL------- 2794
Query: 75 HHTCPCLPNLLC 86
T C PN C
Sbjct: 2795 -STAGCAPNNTC 2805
>gi|40317628 thrombospondin 2 precursor [Homo sapiens]
Length = 1172
Score = 30.0 bits (66), Expect = 0.41
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 79 PCLPNLLCSRFPDGRYRC 96
PC P CS FPDG + C
Sbjct: 557 PCFPGAQCSSFPDGSWSC 574
>gi|55743080 ADAM metallopeptidase domain 2 proprotein [Homo
sapiens]
Length = 735
Score = 29.6 bits (65), Expect = 0.53
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 15 TVSDCAVITGAC--------ERDVQCGAGTCCAISLWLRGLRMCTPLGRE---GEECHPG 63
T DCA+I C + C G CC L++ RMC P E E C+
Sbjct: 402 TEQDCALIGETCCDIATCRFKAGSNCAEGPCCENCLFMSKERMCRPSFEECDLPEYCNGS 461
Query: 64 SHKVP 68
S P
Sbjct: 462 SASCP 466
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 29.3 bits (64), Expect = 0.69
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 15/49 (30%)
Query: 47 LRMCTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLLCSRFPDGRYR 95
L +CT G +G++ HPG PC + RF DG Y+
Sbjct: 1429 LLLCTQCGPDGKQLHPG---------------PCGLQAVSQRFEDGHYK 1462
>gi|148833508 notch1 preproprotein [Homo sapiens]
Length = 2555
Score = 28.9 bits (63), Expect = 0.90
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 19 CAVITGACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTC 78
C + C+ GTC S RG P G EG C + R TC
Sbjct: 1304 CESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTC 1363
Query: 79 ---PCLPNLLC 86
P P LC
Sbjct: 1364 ISGPRSPTCLC 1374
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 28.9 bits (63), Expect = 0.90
Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 19 CAVITGACERDVQCGAGTCCAISLWLRGLRMCTPL-----GREGEECHPGSHKVPFFRKR 73
C V+TG C+ + G C SL R C P G G+ C+ +
Sbjct: 1056 CDVVTGHCQCKSKFGGRACDQCSLGYRDFPDCVPCDCDLRGTSGDACNLEQGLCGCVEET 1115
Query: 74 KHHTCPCLPNLL---CSRFPDGRYRCSMD 99
CPC N+ C+ +G + D
Sbjct: 1116 --GACPCKENVFGPQCNECREGTFALRAD 1142
>gi|4502895 colipase preproprotein [Homo sapiens]
Length = 112
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 26 CERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLL 85
C QC + CC S L GL CT + E EC S K + ++ CPC L
Sbjct: 34 CMNSAQCKSN-CCQHSSAL-GLARCTSMASENSEC---SVKTLY---GIYYKCPCERGLT 85
Query: 86 C 86
C
Sbjct: 86 C 86
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 28.1 bits (61), Expect = 1.5
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 14/86 (16%)
Query: 19 CAVITGACERDVQCGAGTCCAI-------SLWLRGLRMCT--PLGREGEECHPGSHKVPF 69
C+ +TG C R + G C + S + R C+ G EC PG
Sbjct: 984 CSRVTGECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASGVSPMECPPGGGAC-- 1041
Query: 70 FRKRKHHTCPCLPN---LLCSRFPDG 92
CPCLPN L C R DG
Sbjct: 1042 LCDPVTGACPCLPNVTGLACDRCADG 1067
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 28.1 bits (61), Expect = 1.5
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 14/48 (29%)
Query: 50 CTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLL---CSRFPDGRY 94
C P G G C P + CPC PN++ C+R G Y
Sbjct: 1268 CHPTGATGPHCSPEGGQ-----------CPCQPNVIGRQCTRCATGHY 1304
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 28.1 bits (61), Expect = 1.5
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 14/48 (29%)
Query: 50 CTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLL---CSRFPDGRY 94
C P G G C P + CPC PN++ C+R G Y
Sbjct: 1268 CHPTGATGPHCSPEGGQ-----------CPCQPNVIGRQCTRCATGHY 1304
>gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens]
Length = 1144
Score = 28.1 bits (61), Expect = 1.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 65 HKVPFFRKRKHHTCPCLPNLLC----SRFPDGRYRC 96
H +PF+ HTC P + C R P GR+ C
Sbjct: 347 HMMPFYSYDIPHTCGPDPKICCQFDFKRLPGGRFGC 382
>gi|239740845 PREDICTED: hypothetical protein XP_002344070 [Homo
sapiens]
Length = 222
Score = 27.7 bits (60), Expect = 2.0
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 16/75 (21%)
Query: 12 LLVTVSDCAVITGACERDVQCGAGTCC---------AISLWLRGLRMCTPLGREGEECHP 62
LL T+ C V+ GA Q GA +C A S+ L LR P E P
Sbjct: 11 LLGTMDSCFVL-GAPWSPGQLGAESCLRFSNESIQTAASVTLTCLRYRRP------ETSP 63
Query: 63 GSHKVPFFRKRKHHT 77
G+ + F K KHH+
Sbjct: 64 GTRNIAFLPKGKHHS 78
>gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]
Length = 1150
Score = 27.7 bits (60), Expect = 2.0
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Query: 65 HKVPFFRKRKHHTCPCLPNLLC----SRFPDGRYRC 96
H +PF+ HTC P + C R P GR C
Sbjct: 347 HMMPFYSYDVPHTCGPDPKICCQFDFKRLPGGRINC 382
>gi|4504151 granulin precursor [Homo sapiens]
Length = 593
Score = 27.3 bits (59), Expect = 2.6
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 24 GACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVP 68
G C+ D C AG C + + G C P E C G H P
Sbjct: 59 GPCQVDAHCSAGHSCIFT--VSGTSSCCPF-PEAVACGDGHHCCP 100
>gi|239754813 PREDICTED: hypothetical protein [Homo sapiens]
Length = 236
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 48 RMCTPLGREGEECHPG 63
+ C PLGR G CHPG
Sbjct: 164 KSCHPLGRCGLRCHPG 179
>gi|239749342 PREDICTED: hypothetical protein XP_002347001 [Homo
sapiens]
Length = 236
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 48 RMCTPLGREGEECHPG 63
+ C PLGR G CHPG
Sbjct: 164 KSCHPLGRCGLRCHPG 179
>gi|239743430 PREDICTED: hypothetical protein XP_002342854 [Homo
sapiens]
Length = 236
Score = 27.3 bits (59), Expect = 2.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 48 RMCTPLGREGEECHPG 63
+ C PLGR G CHPG
Sbjct: 164 KSCHPLGRCGLRCHPG 179
>gi|40317626 thrombospondin 1 precursor [Homo sapiens]
Length = 1170
Score = 26.6 bits (57), Expect = 4.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 79 PCLPNLLCSRFPDGRYRC 96
PC + C+ +PDG ++C
Sbjct: 555 PCFAGVKCTSYPDGSWKC 572
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 26.6 bits (57), Expect = 4.5
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 51 TPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLLC 86
TP GR CH ++++ K+ TC C N C
Sbjct: 596 TPFGR----CHSAVDPAEYYKRCKYDTCNCQNNEDC 627
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 26.6 bits (57), Expect = 4.5
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 51 TPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNLLC 86
TP GR CH ++++ K+ TC C N C
Sbjct: 497 TPFGR----CHSAVDPAEYYKRCKYDTCNCQNNEDC 528
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.330 0.142 0.498
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,739,461
Number of Sequences: 37866
Number of extensions: 226681
Number of successful extensions: 627
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 47
length of query: 105
length of database: 18,247,518
effective HSP length: 76
effective length of query: 29
effective length of database: 15,369,702
effective search space: 445721358
effective search space used: 445721358
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.