CLPS 28454

Name: CLPS	Sequence: fasta or formatted (112aa)		NCBI GI: 4502895
Description: colipase preproprotein		Referenced in: Lipid Metabolism
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 9 2 C cysteine 8.9 10 2 D aspartate 1.8 2 1 E glutamate 6.2 7 1 F phenylalanine 0.9 1 1 G glycine 8.9 10 1 H histidine 1.8 2 1 I isoleucine 8.0 9 3 K lysine 5.4 6 1 L leucine 9.8 11 3 M methionine 2.7 3 1 N asparagine 6.2 7 1 P proline 2.7 3 1 Q glutamine 2.7 3 1 R arginine 3.6 4 1 S serine 9.8 11 2 T threonine 5.4 6 1 V valine 3.6 4 1 W tryptophan 0.0 0 0 Y tyrosine 3.6 4 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 colipase preproprotein C6orf127 0.144 hypothetical protein LOC340204 C6orf126 0.057 hypothetical protein LOC389383 LOC645277 0.043 PREDICTED: hypothetical protein LOC645277 0.038 PREDICTED: hypothetical protein LOC645277 0.038 PREDICTED: hypothetical protein NOTCH2 0.038 notch 2 preproprotein NOTCH2NL 0.038 Notch homolog 2 N-terminal like protein DKK3 0.029 dickkopf homolog 3 precursor DKK3 0.029 dickkopf homolog 3 precursor DKK3 0.029 dickkopf homolog 3 precursor NOTCH1 0.024 notch1 preproprotein EDIL3 0.024 EGF-like repeats and discoidin I-like domains-contai... DKK1 0.024 dickkopf homolog 1 precursor CRB1 0.019 crumbs homolog 1 precursor PROK1 0.014 prokineticin 1 KRTAP9-9 0.014 keratin associated protein 9-9 DKK2 0.014 dickkopf homolog 2 precursor PROK2 0.014 prokineticin 2 isoform b precursor TNR 0.010 tenascin R KRTAP5-9 0.010 keratin associated protein 5-9 JAG2 0.010 jagged 2 isoform b precursor JAG2 0.010 jagged 2 isoform a precursor CMC1 0.010 COX assembly mitochondrial protein homolog KRTAP10-2 0.005 keratin associated protein 10-2 ANKMY1 0.005 ankyrin repeat and MYND domain containing 1 isoform ... KRTAP9-2 0.005 keratin associated protein 9.2 ANKMY1 0.005 ankyrin repeat and MYND domain containing 1 isoform ... LOC729815 0.005 PREDICTED: hypothetical protein KRTAP5-4 0.005 keratin associated protein 5-4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.