Guide to the Human Genome
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Search of human proteins with 9910342

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9910342 SLAM family member 8 [Homo sapiens]
         (285 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9910342 SLAM family member 8 [Homo sapiens]                        588   e-168
gi|4506969 signaling lymphocytic activation molecule family memb...    69   6e-12
gi|4502687 CD84 molecule [Homo sapiens]                                60   3e-09
gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]       58   1e-08
gi|21361571 CD48 molecule [Homo sapiens]                               55   7e-08
gi|19923572 SLAM family member 7 [Homo sapiens]                        54   2e-07
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]          47   2e-05
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]             45   7e-05
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]           44   1e-04
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]           44   1e-04
gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]              44   2e-04
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]         36   0.034
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]                    36   0.034
gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ...    36   0.034
gi|40255013 carcinoembryonic antigen-related cell adhesion molec...    36   0.044
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]          34   0.13 
gi|157168355 CD22 molecule [Homo sapiens]                              34   0.17 
gi|13376852 CD276 antigen isoform b [Homo sapiens]                     33   0.22 
gi|68161541 carcinoembryonic antigen-related cell adhesion molec...    33   0.29 
gi|19923195 carcinoembryonic antigen-related cell adhesion molec...    33   0.29 
gi|98986445 carcinoembryonic antigen-related cell adhesion molec...    33   0.29 
gi|118572606 hemicentin 1 [Homo sapiens]                               33   0.29 
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi...    33   0.37 
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]                    32   0.64 
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]                    32   0.64 
gi|67188443 CD276 antigen isoform a [Homo sapiens]                     32   0.83 
gi|21314600 carcinoembryonic antigen-related cell adhesion molec...    32   0.83 
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ...    32   0.83 
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [...    32   0.83 
gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi...    32   0.83 

>gi|9910342 SLAM family member 8 [Homo sapiens]
          Length = 285

 Score =  588 bits (1515), Expect = e-168
 Identities = 285/285 (100%), Positives = 285/285 (100%)

Query: 1   MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60
           MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL
Sbjct: 1   MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60

Query: 61  ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK 120
           ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK
Sbjct: 61  ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK 120

Query: 121 VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF 180
           VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF
Sbjct: 121 VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF 180

Query: 181 TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP 240
           TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP
Sbjct: 181 TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP 240

Query: 241 VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP 285
           VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP
Sbjct: 241 VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP 285


>gi|4506969 signaling lymphocytic activation molecule family member
           1 [Homo sapiens]
          Length = 335

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 10/136 (7%)

Query: 117 LQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEP 176
           LQL++Y+ V  P ++V        Q + TC + L C       + YSW  +     G  P
Sbjct: 133 LQLRLYEQVSTPEIKVL----NKTQENGTCTLILGCTVEKGDHVAYSWSEKA----GTHP 184

Query: 177 HSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGK--ASYKDV 234
            +      +LS++LGP   D  Y C VSNP+S +  T +PW  C  + +  K  A Y  +
Sbjct: 185 LNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGL 244

Query: 235 LLVVVPVSLLLMLVTL 250
           L  V+ + ++++++ L
Sbjct: 245 LGGVIMILIMVVILQL 260


>gi|4502687 CD84 molecule [Homo sapiens]
          Length = 328

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 27/257 (10%)

Query: 1   MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60
           M    LW LLL     P        +  V G +      P   Q    +    W S+  +
Sbjct: 1   MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV 60

Query: 61  ATFFRGSLET-----LYHSRFLGRAQ-LHSNLSLELGPLESGDSGNFSVLMVDTRGQPWT 114
           A    G  ET     + H  +  R   L  N +L +  L   D+G++    ++T+  P+T
Sbjct: 61  AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKA-DINTQADPYT 119

Query: 115 QTLQ--LKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISE-ITYSWRRETTMD 171
            T +  L++Y  + +P +   +     A  + TC V L+C      + +TY+W       
Sbjct: 120 TTKRYNLQIYRRLGKPKITQSLM----ASVNSTCNVTLTCSVEKEEKNVTYNWS------ 169

Query: 172 FGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASY 231
                  L  +G VL I   P D+++ Y+C   NPVS +  +++    C  + A G  ++
Sbjct: 170 ------PLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLC-ADIAMGFRTH 222

Query: 232 KDVLLVVVPVSLLLMLV 248
              LL V+ +  LL+L+
Sbjct: 223 HTGLLSVLAMFFLLVLI 239


>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
          Length = 365

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)

Query: 44  QVREAIWRSLWPSEE---LLATFFRGSLET-LYHSRFLGRAQLHSNLSLELGPLESGDSG 99
           +V    W+ L PS+     +  +  GSL +   + RF   + +  NLSL +   +  DSG
Sbjct: 47  KVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRF---SFIVKNLSLLIKAAQQQDSG 103

Query: 100 NFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISE 159
            + + +    G+  T T Q+ V+D V +P +Q     +        CQV LSC       
Sbjct: 104 LYCLEVTSISGKVQTATFQVFVFDKVEKPRLQ----GQGKILDRGRCQVALSCLVSRDGN 159

Query: 160 ITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV------AYSCIVSNPVSWDLAT 213
           ++Y+W R + +        + T G +  +     D +V       Y+C VSNPVSW+  T
Sbjct: 160 VSYAWYRGSKL--------IQTAGNLTYL-----DEEVDINGTHTYTCNVSNPVSWESHT 206

Query: 214 VTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVG 273
           +     C +  A  +  +   L+++V      +L  LF     C C  ++K+        
Sbjct: 207 LNLTQDCQN--AHQEFRFWPFLVIIV------ILSALFLGTLACFCVWRRKRKEKQSETS 258

Query: 274 PETENPLVQDL 284
           P+    + +D+
Sbjct: 259 PKEFLTIYEDV 269


>gi|21361571 CD48 molecule [Homo sapiens]
          Length = 243

 Score = 55.1 bits (131), Expect = 7e-08
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 12/177 (6%)

Query: 72  YHSRFLGRAQLHSNL-SLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVV 130
           + S+F GR +L     +L +  ++  D+  + + ++   G      ++L+V D VP+PV+
Sbjct: 77  FESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPVI 136

Query: 131 QVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISL 190
           ++    E+       C + LSC  P  S + Y+W  +        P        VL  +L
Sbjct: 137 KI----EKIEDMDDNCYLKLSCVIPGES-VNYTWYGDK------RPFPKELQNSVLETTL 185

Query: 191 GPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLML 247
            P +    Y+C VSN VS    TV     C    + G       L+V VP  L L+L
Sbjct: 186 MPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL 242


>gi|19923572 SLAM family member 7 [Homo sapiens]
          Length = 335

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)

Query: 87  SLELGPLESGDSGNFSV-LMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKT 145
           SL+L  L+  DSG + V +   +  QP TQ   L VY+ + +P V + +   ++     T
Sbjct: 89  SLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVYEHLSKPKVTMGLQSNKNG----T 144

Query: 146 CQVFLSCWAPNISE-ITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVS 204
           C   L+C   +  E + Y+W+         E H+    G +L IS   G+ D+ + C+  
Sbjct: 145 CVTNLTCCMEHGEEDVIYTWK--ALGQAANESHN----GSILPISWRWGESDMTFICVAR 198

Query: 205 NPVSWDLAT-VTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLF 251
           NPVS + ++ +     C   A    +S   + L++VP+ L L ++ LF
Sbjct: 199 NPVSRNFSSPILARKLCEGAADDPDSSMVLLCLLLVPLLLSLFVLGLF 246


>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
          Length = 416

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 79  RAQLHSNLSLELGPLESGDSGNFSV-LMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           R +L  N SL L  L+  D G + V + +        +T+ L V   + RP V V     
Sbjct: 98  RIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTV 157

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
            +   + T    L+C   N ++ +Y+W ++           L  D +VL+I+    + D 
Sbjct: 158 LELSEAFT----LNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDD 213

Query: 198 AYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWC 257
            YSC+V NP+S          S   +    + S   ++L    + LL+ LVT+ + W   
Sbjct: 214 LYSCMVENPIS-------QGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACWK-- 264

Query: 258 PCSGKKKK----------DVHADRVGPETE 277
           P   K+KK          D + DR+ PE +
Sbjct: 265 PSKRKQKKLEKQNSLEYMDQNDDRLKPEAD 294


>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
          Length = 289

 Score = 45.1 bits (105), Expect = 7e-05
 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 22/193 (11%)

Query: 24  QVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRG-----SLETLYHSRFLG 78
           +V++ +  S+ L    PP  +V   IW S     + LAT   G     +   + +  + G
Sbjct: 29  EVVAVLQESISLPLEIPPDEEVENIIWSS----HKSLATVVPGKEGHPATIMVTNPHYQG 84

Query: 79  RAQ-LHSNLSLELGPLESGDSGNFSVLMVDTRGQPWT-QTLQLKVYDAVPRPVVQVFIAV 136
           +   L  + SL +  L   DSG +   +     Q  T Q   + VY  +  P     I V
Sbjct: 85  QVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQ----ITV 140

Query: 137 ERDAQPSKTCQVFLSCWAPNIS-EITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDR 195
             ++     C + L C       ++TYSW       +       F +G VLS S  PGD 
Sbjct: 141 NFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTY------TFHEGPVLSTSWRPGDS 194

Query: 196 DVAYSCIVSNPVS 208
            ++Y+C  +NP+S
Sbjct: 195 ALSYTCRANNPIS 207


>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
          Length = 450

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 85  NLSLELGPLESGDSGNFSVLMVDTRGQPW---TQTLQLKVYDAVPRPVVQVFI---AVER 138
           N SL + PL+  D GN+ ++ V+ +G      +Q +Q+ V D V +PVVQ+     AVE 
Sbjct: 92  NASLLINPLQFPDEGNY-IVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEY 150

Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198
               + TC V         + + Y W +          +S       L I+    +    
Sbjct: 151 VGNMTLTCHV------EGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGN 204

Query: 199 YSCIVSNPVS 208
           YSC+V NPVS
Sbjct: 205 YSCLVRNPVS 214


>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
          Length = 462

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 13/130 (10%)

Query: 85  NLSLELGPLESGDSGNFSVLMVDTRGQPW---TQTLQLKVYDAVPRPVVQVFI---AVER 138
           N SL + PL+  D GN+ ++ V+ +G      +Q +Q+ V D V +PVVQ+     AVE 
Sbjct: 104 NASLLINPLQFPDEGNY-IVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEY 162

Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198
               + TC V         + + Y W +          +S       L I+    +    
Sbjct: 163 VGNMTLTCHV------EGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGN 216

Query: 199 YSCIVSNPVS 208
           YSC+V NPVS
Sbjct: 217 YSCLVRNPVS 226


>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
          Length = 655

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 19/185 (10%)

Query: 29  VGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRGSLE-TLYHSRFLGRAQLHS-NL 86
           +GGSV L    P    V   I   +W   +    F R     T+    +LGR  +   + 
Sbjct: 59  LGGSVTL----PLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSY 114

Query: 87  SLELGPLESGDSGNFSVLMVDTRGQPWTQT-LQLKVYDAVPRPVVQVFIAVERDAQPSKT 145
           SL +  L   D+G++   +     +  T+    L VY+ +  P V +          + +
Sbjct: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSV---KVSENFS 171

Query: 146 CQVFLSCWAPNISE-ITYSWRRETTMDFGMEPHSLFTDG-QVLSISLGPGDRDVAYSCIV 203
           C + L C      + + YSW          EPH+  ++G  +L++S  P D D+ Y C  
Sbjct: 172 CNITLMCSVKGAEKSVLYSWTPR-------EPHASESNGGSILTVSRTPCDPDLPYICTA 224

Query: 204 SNPVS 208
            NPVS
Sbjct: 225 QNPVS 229


>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
          Length = 1215

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%)

Query: 78  GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           GR    ++LSLE+  +   D G +  +  +  G     ++ L V +A   P V +  + +
Sbjct: 445 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 500

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
             +Q     +V +SC A        SW RE+      E   +  D Q   I  G    D 
Sbjct: 501 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 555

Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246
             YSC  +N V  D  TVT     ++   P  ++   V+LV V    +L+
Sbjct: 556 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 601


>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 5065

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%)

Query: 78  GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           GR    ++LSLE+  +   D G +  +  +  G     ++ L V +A   P V +  + +
Sbjct: 562 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 617

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
             +Q     +V +SC A        SW RE+      E   +  D Q   I  G    D 
Sbjct: 618 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 672

Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246
             YSC  +N V  D  TVT     ++   P  ++   V+LV V    +L+
Sbjct: 673 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 718



 Score = 32.0 bits (71), Expect = 0.64
 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 88   LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141
            L+LG  +S D+G ++    +  G     T +L VY       A  RP V   +A     +
Sbjct: 1558 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 1612

Query: 142  PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200
            P     V L C A      T SW  E           L TDG VL +   PG+     YS
Sbjct: 1613 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 1666

Query: 201  CIVSNP 206
            C+ S+P
Sbjct: 1667 CVASSP 1672


>gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo
           sapiens]
          Length = 790

 Score = 36.2 bits (82), Expect = 0.034
 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%)

Query: 78  GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           GR    ++LSLE+  +   D G +  +  +  G     ++ L V +A   P V +  + +
Sbjct: 561 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 616

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
             +Q     +V +SC A        SW RE+      E   +  D Q   I  G    D 
Sbjct: 617 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 671

Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246
             YSC  +N V  D  TVT     ++   P  ++   V+LV V    +L+
Sbjct: 672 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 717


>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
           6 (non-specific cross reacting antigen) [Homo sapiens]
          Length = 344

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 8/181 (4%)

Query: 30  GGSVLLVAARPPGFQVREAIWRS-LWPSEELLATFFRGSLETLYHSRFLGRAQLHSNLSL 88
           G  VLL+A   P  ++  + ++        L+  +  G+ +      + GR  ++ N SL
Sbjct: 48  GKEVLLLAHNLPQNRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASL 107

Query: 89  ELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQV 148
            +  +   D+G +++ ++ +       T Q  VY  +P+P +        ++ P +    
Sbjct: 108 LIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----SNNSNPVEDKDA 162

Query: 149 FLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV-AYSCIVSNPV 207
                 P +   TY W         + P    ++G +    L     D  +Y C + NP 
Sbjct: 163 VAFTCEPEVQNTTYLW-WVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPA 221

Query: 208 S 208
           S
Sbjct: 222 S 222


>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
          Length = 956

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 12/130 (9%)

Query: 85  NLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAV-ERDAQPS 143
           N +L +  ++    G +     +  G P  +++++ VY  +  PVV V  ++ E   Q  
Sbjct: 92  NETLRITNIQRHQGGRYYCKAENGLGSPAIKSIRVDVY-YLDDPVVTVHQSIGEAKEQFY 150

Query: 144 KTCQVFLSCWAPNISEITYSWRRETTM-----DFGMEPHS-LFTDGQVLSI---SLGPGD 194
               VFL C A +   + YSWRR   +     D G+E +   FT G+   +   +L P D
Sbjct: 151 YERTVFLRCVANSNPPVRYSWRRGQEVLLQGSDKGVEIYEPFFTQGETKILKLKNLRPQD 210

Query: 195 RDVAYSCIVS 204
               YSCI S
Sbjct: 211 Y-ANYSCIAS 219


>gi|157168355 CD22 molecule [Homo sapiens]
          Length = 847

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 75  RFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFI 134
           +FLG    + N +L + P+   DSG   + M +++ + W + + L V +    P +Q+  
Sbjct: 93  QFLG--DKNKNCTLSIHPVHLNDSGQLGLRM-ESKTEKWMERIHLNVSERPFPPHIQLPP 149

Query: 135 AVERDAQPSKTCQVFLSCW 153
            ++   + + TC +  SC+
Sbjct: 150 EIQESQEVTLTCLLNFSCY 168


>gi|13376852 CD276 antigen isoform b [Homo sapiens]
          Length = 316

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 69/290 (23%), Positives = 109/290 (37%), Gaps = 43/290 (14%)

Query: 11  LWEAL---LPITVTGAQVLSKVGGSVLLVAA--RPPGFQVREA--IWRSLWPSEELLATF 63
           LW  L   L + V    V++ VG    L  +    PGF + +   IW+ L  +++L+ +F
Sbjct: 21  LWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQ-LTDTKQLVHSF 79

Query: 64  FRGSLETLYHSRFLGRAQL------HSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTL 117
             G  +    S +  R  L        N SL L  +   D G+F+  +          +L
Sbjct: 80  AEGQDQG---SAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSL 136

Query: 118 QLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWR---------RET 168
           Q+    A P     + +   +D +P  T  +  S +     E    W+           T
Sbjct: 137 QV----AAPYSKPSMTLEPNKDLRPGDTVTITCSSYR-GYPEAEVFWQDGQGVPLTGNVT 191

Query: 169 TMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGK 228
           T     E   LF    VL + LG       YSC+V NPV    A  +   +      P +
Sbjct: 192 TSQMANE-QGLFDVHSVLRVVLGANG---TYSCLVRNPVLQQDAHGSVTITGQPMTFPPE 247

Query: 229 ASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETEN 278
           A +  V L V  ++LL+ L   F  W       K K+    +  G E ++
Sbjct: 248 ALWVTVGLSVCLIALLVALA--FVCWR------KIKQSCEEENAGAEDQD 289


>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 2 precursor [Homo sapiens]
          Length = 464

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 7/132 (5%)

Query: 78  GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           GR  ++ N SL +  +   D+G +++ ++ +       T Q  VY  +P+P +       
Sbjct: 97  GRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----S 151

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
            ++ P +          P   + TY W         + P    ++G      L     D 
Sbjct: 152 NNSNPVEDKDAVAFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDT 210

Query: 198 A-YSCIVSNPVS 208
             Y C + NPVS
Sbjct: 211 GPYECEIQNPVS 222


>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 1 precursor [Homo sapiens]
          Length = 526

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 7/132 (5%)

Query: 78  GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137
           GR  ++ N SL +  +   D+G +++ ++ +       T Q  VY  +P+P +       
Sbjct: 97  GRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----S 151

Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197
            ++ P +          P   + TY W         + P    ++G      L     D 
Sbjct: 152 NNSNPVEDKDAVAFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDT 210

Query: 198 A-YSCIVSNPVS 208
             Y C + NPVS
Sbjct: 211 GPYECEIQNPVS 222


>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
           5 preproprotein [Homo sapiens]
          Length = 702

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 76  FLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIA 135
           + GR  ++ N SL +  +   D+G +++ ++ +       T Q +VY  +P+P +     
Sbjct: 95  YSGREIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSIS---- 150

Query: 136 VERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDG-QVLSISLGPGD 194
              +++P +          P   + TY W         + P    ++G + L++     +
Sbjct: 151 -SNNSKPVEDKDAVAFTCEPETQDATYLW-WVNNQSLPVSPRLQLSNGNRTLTLFNVTRN 208

Query: 195 RDVAYSCIVSNPVS 208
              +Y C   NPVS
Sbjct: 209 DTASYKCETQNPVS 222


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 79  RAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVER 138
           R +  +NLSLEL  ++  D+G +   MV + G     ++ L V +    P V V   + +
Sbjct: 567 RIRTLANLSLELKSVKFNDAGEYH-CMVSSEGGSSAASVFLTVQEP---PKVTV---MPK 619

Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198
           +   +   +V + C A    +   +W        G   + + +DG +   +  P D  + 
Sbjct: 620 NQSFTGGSEVSIMCSATGYPKPKIAWTVNDMFIVGSHRYRMTSDGTLFIKNAAPKDAGI- 678

Query: 199 YSCIVSNPVSWD 210
           Y C+ SN    D
Sbjct: 679 YGCLASNSAGTD 690



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 10/123 (8%)

Query: 63  FFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY 122
           +F+G LE L  S FL    L   L ++    +  D+G+++ + ++  G+  T  + L V 
Sbjct: 735 WFKGDLE-LRPSTFLIIDPLLGLLKIQ--ETQDLDAGDYTCVAINEAGRA-TGKITLDVG 790

Query: 123 DAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTD 182
                    VFI    D        V L C+     E T  WRR   M     P S+ + 
Sbjct: 791 SP------PVFIQEPADVSMEIGSNVTLPCYVQGYPEPTIKWRRLDNMPIFSRPFSVSSI 844

Query: 183 GQV 185
            Q+
Sbjct: 845 SQL 847


>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
           sapiens]
          Length = 428

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 25/149 (16%)

Query: 71  LYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMV----DTRGQPWTQTLQLKVYDAVP 126
           +Y   + GR  ++SN SL +  +   D+G++++ +V     TRG+  T      +Y   P
Sbjct: 90  IYGPAYSGRETVYSNASLLIQNVTREDAGSYTLHIVKRGDGTRGE--TGHFTFTLYLETP 147

Query: 127 RPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSL 179
           +P +       R+   +    V L+C  P   + +Y W           ++       +L
Sbjct: 148 KPSISSSNLYPREDMEA----VSLTC-DPETPDASYLWWMNGQSLPMTHSLQLSKNKRTL 202

Query: 180 FTDGQVLSISLGPGDRDVAYSCIVSNPVS 208
           F  G V   + GP      Y C + NPVS
Sbjct: 203 FLFG-VTKYTAGP------YECEIRNPVS 224


>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3874

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 88  LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141
           L+LG  +S D+G ++    +  G     T +L VY       A  RP V   +A     +
Sbjct: 367 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 421

Query: 142 PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200
           P     V L C A      T SW  E           L TDG VL +   PG+     YS
Sbjct: 422 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 475

Query: 201 CIVSNP 206
           C+ S+P
Sbjct: 476 CVASSP 481


>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
          Length = 3783

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%)

Query: 88  LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141
           L+LG  +S D+G ++    +  G     T +L VY       A  RP V   +A     +
Sbjct: 276 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 330

Query: 142 PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200
           P     V L C A      T SW  E           L TDG VL +   PG+     YS
Sbjct: 331 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 384

Query: 201 CIVSNP 206
           C+ S+P
Sbjct: 385 CVASSP 390


>gi|67188443 CD276 antigen isoform a [Homo sapiens]
          Length = 534

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 38/255 (14%)

Query: 41  PGFQVREA--IWRSLWPSEELLATFFRGSLETLYHSRFLGRAQL------HSNLSLELGP 92
           PGF + +   IW+ L  +++L+ +F  G  +    S +  R  L        N SL L  
Sbjct: 274 PGFSLAQLNLIWQ-LTDTKQLVHSFTEGRDQG---SAYANRTALFPDLLAQGNASLRLQR 329

Query: 93  LESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSC 152
           +   D G+F+  +          +LQ+    A P     + +   +D +P  T  +  S 
Sbjct: 330 VRVADEGSFTCFVSIRDFGSAAVSLQV----AAPYSKPSMTLEPNKDLRPGDTVTITCSS 385

Query: 153 WAPNISEITYSWR---------RETTMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIV 203
           +     E    W+           TT     E   LF    VL + LG       YSC+V
Sbjct: 386 YR-GYPEAEVFWQDGQGVPLTGNVTTSQMANE-QGLFDVHSVLRVVLGANG---TYSCLV 440

Query: 204 SNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKK 263
            NPV    A  +   +      P +A +  V L V  ++LL+ L   F  W       K 
Sbjct: 441 RNPVLQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALA--FVCWR------KI 492

Query: 264 KKDVHADRVGPETEN 278
           K+    +  G E ++
Sbjct: 493 KQSCEEENAGAEDQD 507



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 39/232 (16%)

Query: 11  LWEAL---LPITVTGAQVLSKVGGSVLLVAA--RPPGFQVREA--IWRSLWPSEELLATF 63
           LW  L   L + V    V++ VG    L  +    PGF + +   IW+ L  +++L+ +F
Sbjct: 21  LWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQ-LTDTKQLVHSF 79

Query: 64  FRGSLETLYHSRFLGRAQL------HSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTL 117
             G  +    S +  R  L        N SL L  +   D G+F+  +          +L
Sbjct: 80  AEGQDQG---SAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSL 136

Query: 118 QLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWR---------RET 168
           Q+    A P     + +   +D +P  T  +  S +     E    W+           T
Sbjct: 137 QV----AAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ-GYPEAEVFWQDGQGVPLTGNVT 191

Query: 169 TMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPV----SWDLATVTP 216
           T     E   LF    +L + LG       YSC+V NPV    +    T+TP
Sbjct: 192 TSQMANE-QGLFDVHSILRVVLGANG---TYSCLVRNPVLQQDAHSSVTITP 239


>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
           8 [Homo sapiens]
          Length = 349

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 21/162 (12%)

Query: 76  FLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIA 135
           +  R  ++ N SL +  +   D+G++++ ++         T Q  V+   P+P +     
Sbjct: 95  YSNRETIYPNASLLMRNVTRNDTGSYTLQVIKLNLMSEEVTGQFSVHPETPKPSIS---- 150

Query: 136 VERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDR 195
              ++ P +          P     TY W         + P    ++G      L     
Sbjct: 151 -SNNSNPVEDKDAVAFTCEPETQNTTYLW-WVNGQSLPVSPRLQLSNGNRTLTLLSVTRN 208

Query: 196 DVA-YSCIVSNPVSW--------------DLATVTPWDSCHH 222
           DV  Y C + NP S               D  T++P D+ +H
Sbjct: 209 DVGPYECEIQNPASANFSDPVTLNVLYGPDAPTISPSDTYYH 250


>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
           [Homo sapiens]
          Length = 419

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 21/147 (14%)

Query: 71  LYHSRFLGRAQLHSNLSLELGPLESGDSGNFS--VLMVDTRGQPWTQTLQLKVYDAVPRP 128
           +Y   + GR  ++SN SL +  +   D+G+++  ++M     +  T      +Y   P+P
Sbjct: 90  IYGPAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETPKP 149

Query: 129 VVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSLFT 181
            +       R+A  +    V L+C  P   + +Y W            +       +LF 
Sbjct: 150 SISSSKLNPREAMEA----VSLTC-DPETPDASYLWWMNGQSLPMSHRLQLSETNRTLFL 204

Query: 182 DGQVLSISLGPGDRDVAYSCIVSNPVS 208
            G V   + GP      Y C + NPVS
Sbjct: 205 LG-VTKYTAGP------YECEIRNPVS 224


>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
           [Homo sapiens]
          Length = 426

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 21/147 (14%)

Query: 71  LYHSRFLGRAQLHSNLSLELGPLESGDSGNFS--VLMVDTRGQPWTQTLQLKVYDAVPRP 128
           +Y   + GR  ++SN SL +  +   D+G+++  ++M     +  T      +Y   P+P
Sbjct: 90  IYGPAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETPKP 149

Query: 129 VVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSLFT 181
            +       R+A  +    V L+C  P   + +Y W            +       +LF 
Sbjct: 150 SISSSKLNPREAMEA----VSLTC-DPETPDASYLWWMNGQSLPMSHRLQLSETNRTLFL 204

Query: 182 DGQVLSISLGPGDRDVAYSCIVSNPVS 208
            G V   + GP      Y C + NPVS
Sbjct: 205 LG-VTKYTAGP------YECEIRNPVS 224


>gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo
           sapiens]
          Length = 335

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 11/98 (11%)

Query: 71  LYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVD----TRGQPWTQTLQLKVYDAVP 126
           +Y   + GR  ++SN SL +  +   D+G++++ ++     TRG   T      +Y  +P
Sbjct: 90  IYGPAYTGRETVYSNASLLIQNVTREDAGSYTLHIIKRGDRTRGV--TGYFTFNLYLKLP 147

Query: 127 RPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW 164
           +P + +      +++P +   V      P     TY W
Sbjct: 148 KPYITI-----NNSKPRENKDVLAFTCEPKSENYTYIW 180


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,801,666
Number of Sequences: 37866
Number of extensions: 514970
Number of successful extensions: 1070
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1021
Number of HSP's gapped (non-prelim): 81
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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