BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|9910342 SLAM family member 8 [Homo sapiens] (285 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|9910342 SLAM family member 8 [Homo sapiens] 588 e-168 gi|4506969 signaling lymphocytic activation molecule family memb... 69 6e-12 gi|4502687 CD84 molecule [Homo sapiens] 60 3e-09 gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens] 58 1e-08 gi|21361571 CD48 molecule [Homo sapiens] 55 7e-08 gi|19923572 SLAM family member 7 [Homo sapiens] 54 2e-07 gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 47 2e-05 gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens] 45 7e-05 gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens] 44 1e-04 gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens] 44 1e-04 gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens] 44 2e-04 gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 36 0.034 gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 36 0.034 gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ... 36 0.034 gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 36 0.044 gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens] 34 0.13 gi|157168355 CD22 molecule [Homo sapiens] 34 0.17 gi|13376852 CD276 antigen isoform b [Homo sapiens] 33 0.22 gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 33 0.29 gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 33 0.29 gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 33 0.29 gi|118572606 hemicentin 1 [Homo sapiens] 33 0.29 gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi... 33 0.37 gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.64 gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.64 gi|67188443 CD276 antigen isoform a [Homo sapiens] 32 0.83 gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 32 0.83 gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 32 0.83 gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 32 0.83 gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapi... 32 0.83 >gi|9910342 SLAM family member 8 [Homo sapiens] Length = 285 Score = 588 bits (1515), Expect = e-168 Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60 MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL Sbjct: 1 MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60 Query: 61 ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK 120 ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK Sbjct: 61 ATFFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLK 120 Query: 121 VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF 180 VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF Sbjct: 121 VYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLF 180 Query: 181 TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP 240 TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP Sbjct: 181 TDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVP 240 Query: 241 VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP 285 VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP Sbjct: 241 VSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETENPLVQDLP 285 >gi|4506969 signaling lymphocytic activation molecule family member 1 [Homo sapiens] Length = 335 Score = 68.6 bits (166), Expect = 6e-12 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 10/136 (7%) Query: 117 LQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEP 176 LQL++Y+ V P ++V Q + TC + L C + YSW + G P Sbjct: 133 LQLRLYEQVSTPEIKVL----NKTQENGTCTLILGCTVEKGDHVAYSWSEKA----GTHP 184 Query: 177 HSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGK--ASYKDV 234 + +LS++LGP D Y C VSNP+S + T +PW C + + K A Y + Sbjct: 185 LNPANSSHLLSLTLGPQHADNIYICTVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGL 244 Query: 235 LLVVVPVSLLLMLVTL 250 L V+ + ++++++ L Sbjct: 245 LGGVIMILIMVVILQL 260 >gi|4502687 CD84 molecule [Homo sapiens] Length = 328 Score = 59.7 bits (143), Expect = 3e-09 Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 27/257 (10%) Query: 1 MVMRPLWSLLLWEALLPITVTGAQVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELL 60 M LW LLL P + V G + P Q + W S+ + Sbjct: 1 MAQHHLWILLLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTSKTSV 60 Query: 61 ATFFRGSLET-----LYHSRFLGRAQ-LHSNLSLELGPLESGDSGNFSVLMVDTRGQPWT 114 A G ET + H + R L N +L + L D+G++ ++T+ P+T Sbjct: 61 AYVTPGDSETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKA-DINTQADPYT 119 Query: 115 QTLQ--LKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISE-ITYSWRRETTMD 171 T + L++Y + +P + + A + TC V L+C + +TY+W Sbjct: 120 TTKRYNLQIYRRLGKPKITQSLM----ASVNSTCNVTLTCSVEKEEKNVTYNWS------ 169 Query: 172 FGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASY 231 L +G VL I P D+++ Y+C NPVS + +++ C + A G ++ Sbjct: 170 ------PLGEEGNVLQIFQTPEDQELTYTCTAQNPVSNNSDSISARQLC-ADIAMGFRTH 222 Query: 232 KDVLLVVVPVSLLLMLV 248 LL V+ + LL+L+ Sbjct: 223 HTGLLSVLAMFFLLVLI 239 >gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens] Length = 365 Score = 57.8 bits (138), Expect = 1e-08 Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%) Query: 44 QVREAIWRSLWPSEE---LLATFFRGSLET-LYHSRFLGRAQLHSNLSLELGPLESGDSG 99 +V W+ L PS+ + + GSL + + RF + + NLSL + + DSG Sbjct: 47 KVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRF---SFIVKNLSLLIKAAQQQDSG 103 Query: 100 NFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISE 159 + + + G+ T T Q+ V+D V +P +Q + CQV LSC Sbjct: 104 LYCLEVTSISGKVQTATFQVFVFDKVEKPRLQ----GQGKILDRGRCQVALSCLVSRDGN 159 Query: 160 ITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV------AYSCIVSNPVSWDLAT 213 ++Y+W R + + + T G + + D +V Y+C VSNPVSW+ T Sbjct: 160 VSYAWYRGSKL--------IQTAGNLTYL-----DEEVDINGTHTYTCNVSNPVSWESHT 206 Query: 214 VTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVG 273 + C + A + + L+++V +L LF C C ++K+ Sbjct: 207 LNLTQDCQN--AHQEFRFWPFLVIIV------ILSALFLGTLACFCVWRRKRKEKQSETS 258 Query: 274 PETENPLVQDL 284 P+ + +D+ Sbjct: 259 PKEFLTIYEDV 269 >gi|21361571 CD48 molecule [Homo sapiens] Length = 243 Score = 55.1 bits (131), Expect = 7e-08 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 12/177 (6%) Query: 72 YHSRFLGRAQLHSNL-SLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVV 130 + S+F GR +L +L + ++ D+ + + ++ G ++L+V D VP+PV+ Sbjct: 77 FESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQEWKIKLQVLDPVPKPVI 136 Query: 131 QVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISL 190 ++ E+ C + LSC P S + Y+W + P VL +L Sbjct: 137 KI----EKIEDMDDNCYLKLSCVIPGES-VNYTWYGDK------RPFPKELQNSVLETTL 185 Query: 191 GPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLML 247 P + Y+C VSN VS TV C + G L+V VP L L+L Sbjct: 186 MPHNYSRCYTCQVSNSVSSKNGTVCLSPPCTLARSFGVEWIASWLVVTVPTILGLLL 242 >gi|19923572 SLAM family member 7 [Homo sapiens] Length = 335 Score = 53.9 bits (128), Expect = 2e-07 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%) Query: 87 SLELGPLESGDSGNFSV-LMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKT 145 SL+L L+ DSG + V + + QP TQ L VY+ + +P V + + ++ T Sbjct: 89 SLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVYEHLSKPKVTMGLQSNKNG----T 144 Query: 146 CQVFLSCWAPNISE-ITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVS 204 C L+C + E + Y+W+ E H+ G +L IS G+ D+ + C+ Sbjct: 145 CVTNLTCCMEHGEEDVIYTWK--ALGQAANESHN----GSILPISWRWGESDMTFICVAR 198 Query: 205 NPVSWDLAT-VTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLF 251 NPVS + ++ + C A +S + L++VP+ L L ++ LF Sbjct: 199 NPVSRNFSSPILARKLCEGAADDPDSSMVLLCLLLVPLLLSLFVLGLF 246 >gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] Length = 416 Score = 47.0 bits (110), Expect = 2e-05 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 24/210 (11%) Query: 79 RAQLHSNLSLELGPLESGDSGNFSV-LMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 R +L N SL L L+ D G + V + + +T+ L V + RP V V Sbjct: 98 RIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTV 157 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 + + T L+C N ++ +Y+W ++ L D +VL+I+ + D Sbjct: 158 LELSEAFT----LNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDD 213 Query: 198 AYSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWC 257 YSC+V NP+S S + + S ++L + LL+ LVT+ + W Sbjct: 214 LYSCMVENPIS-------QGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACWK-- 264 Query: 258 PCSGKKKK----------DVHADRVGPETE 277 P K+KK D + DR+ PE + Sbjct: 265 PSKRKQKKLEKQNSLEYMDQNDDRLKPEAD 294 >gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens] Length = 289 Score = 45.1 bits (105), Expect = 7e-05 Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 22/193 (11%) Query: 24 QVLSKVGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRG-----SLETLYHSRFLG 78 +V++ + S+ L PP +V IW S + LAT G + + + + G Sbjct: 29 EVVAVLQESISLPLEIPPDEEVENIIWSS----HKSLATVVPGKEGHPATIMVTNPHYQG 84 Query: 79 RAQ-LHSNLSLELGPLESGDSGNFSVLMVDTRGQPWT-QTLQLKVYDAVPRPVVQVFIAV 136 + L + SL + L DSG + + Q T Q + VY + P I V Sbjct: 85 QVSFLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQ----ITV 140 Query: 137 ERDAQPSKTCQVFLSCWAPNIS-EITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDR 195 ++ C + L C ++TYSW + F +G VLS S PGD Sbjct: 141 NFESSGEGACSMSLVCSVEKAGMDMTYSWLSRGDSTY------TFHEGPVLSTSWRPGDS 194 Query: 196 DVAYSCIVSNPVS 208 ++Y+C +NP+S Sbjct: 195 ALSYTCRANNPIS 207 >gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens] Length = 450 Score = 44.3 bits (103), Expect = 1e-04 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 13/130 (10%) Query: 85 NLSLELGPLESGDSGNFSVLMVDTRGQPW---TQTLQLKVYDAVPRPVVQVFI---AVER 138 N SL + PL+ D GN+ ++ V+ +G +Q +Q+ V D V +PVVQ+ AVE Sbjct: 92 NASLLINPLQFPDEGNY-IVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEY 150 Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198 + TC V + + Y W + +S L I+ + Sbjct: 151 VGNMTLTCHV------EGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGN 204 Query: 199 YSCIVSNPVS 208 YSC+V NPVS Sbjct: 205 YSCLVRNPVS 214 >gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens] Length = 462 Score = 44.3 bits (103), Expect = 1e-04 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 13/130 (10%) Query: 85 NLSLELGPLESGDSGNFSVLMVDTRGQPW---TQTLQLKVYDAVPRPVVQVFI---AVER 138 N SL + PL+ D GN+ ++ V+ +G +Q +Q+ V D V +PVVQ+ AVE Sbjct: 104 NASLLINPLQFPDEGNY-IVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQIHPPSGAVEY 162 Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198 + TC V + + Y W + +S L I+ + Sbjct: 163 VGNMTLTCHV------EGGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDIGN 216 Query: 199 YSCIVSNPVS 208 YSC+V NPVS Sbjct: 217 YSCLVRNPVS 226 >gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens] Length = 655 Score = 43.5 bits (101), Expect = 2e-04 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 19/185 (10%) Query: 29 VGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRGSLE-TLYHSRFLGRAQLHS-NL 86 +GGSV L P V I +W + F R T+ +LGR + + Sbjct: 59 LGGSVTL----PLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSY 114 Query: 87 SLELGPLESGDSGNFSVLMVDTRGQPWTQT-LQLKVYDAVPRPVVQVFIAVERDAQPSKT 145 SL + L D+G++ + + T+ L VY+ + P V + + + Sbjct: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSV---KVSENFS 171 Query: 146 CQVFLSCWAPNISE-ITYSWRRETTMDFGMEPHSLFTDG-QVLSISLGPGDRDVAYSCIV 203 C + L C + + YSW EPH+ ++G +L++S P D D+ Y C Sbjct: 172 CNITLMCSVKGAEKSVLYSWTPR-------EPHASESNGGSILTVSRTPCDPDLPYICTA 224 Query: 204 SNPVS 208 NPVS Sbjct: 225 QNPVS 229 >gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] Length = 1215 Score = 36.2 bits (82), Expect = 0.034 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%) Query: 78 GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 GR ++LSLE+ + D G + + + G ++ L V +A P V + + + Sbjct: 445 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 500 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 +Q +V +SC A SW RE+ E + D Q I G D Sbjct: 501 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 555 Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246 YSC +N V D TVT ++ P ++ V+LV V +L+ Sbjct: 556 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 601 >gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] Length = 5065 Score = 36.2 bits (82), Expect = 0.034 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%) Query: 78 GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 GR ++LSLE+ + D G + + + G ++ L V +A P V + + + Sbjct: 562 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 617 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 +Q +V +SC A SW RE+ E + D Q I G D Sbjct: 618 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 672 Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246 YSC +N V D TVT ++ P ++ V+LV V +L+ Sbjct: 673 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 718 Score = 32.0 bits (71), Expect = 0.64 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%) Query: 88 LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141 L+LG +S D+G ++ + G T +L VY A RP V +A + Sbjct: 1558 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 1612 Query: 142 PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200 P V L C A T SW E L TDG VL + PG+ YS Sbjct: 1613 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 1666 Query: 201 CIVSNP 206 C+ S+P Sbjct: 1667 CVASSP 1672 >gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo sapiens] Length = 790 Score = 36.2 bits (82), Expect = 0.034 Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 14/170 (8%) Query: 78 GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 GR ++LSLE+ + D G + + + G ++ L V +A P V + + + Sbjct: 561 GRVAQLADLSLEISGIIPTDGGRYQCVASNANGVT-RASVWLLVREA---PQVSIHTSSQ 616 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 +Q +V +SC A SW RE+ E + D Q I G D Sbjct: 617 HFSQG---VEVKVSCSASGYPTPHISWSRESQAL--QEDSRIHVDAQGTLIIQGVAPEDA 671 Query: 198 A-YSCIVSNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLM 246 YSC +N V D TVT ++ P ++ V+LV V +L+ Sbjct: 672 GNYSCQATNEVGTDQETVT----LYYTDPPSVSAVNAVVLVAVGEEAVLV 717 >gi|40255013 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) [Homo sapiens] Length = 344 Score = 35.8 bits (81), Expect = 0.044 Identities = 35/181 (19%), Positives = 70/181 (38%), Gaps = 8/181 (4%) Query: 30 GGSVLLVAARPPGFQVREAIWRS-LWPSEELLATFFRGSLETLYHSRFLGRAQLHSNLSL 88 G VLL+A P ++ + ++ L+ + G+ + + GR ++ N SL Sbjct: 48 GKEVLLLAHNLPQNRIGYSWYKGERVDGNSLIVGYVIGTQQATPGPAYSGRETIYPNASL 107 Query: 89 ELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQV 148 + + D+G +++ ++ + T Q VY +P+P + ++ P + Sbjct: 108 LIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----SNNSNPVEDKDA 162 Query: 149 FLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV-AYSCIVSNPV 207 P + TY W + P ++G + L D +Y C + NP Sbjct: 163 VAFTCEPEVQNTTYLW-WVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQNPA 221 Query: 208 S 208 S Sbjct: 222 S 222 >gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens] Length = 956 Score = 34.3 bits (77), Expect = 0.13 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 12/130 (9%) Query: 85 NLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAV-ERDAQPS 143 N +L + ++ G + + G P +++++ VY + PVV V ++ E Q Sbjct: 92 NETLRITNIQRHQGGRYYCKAENGLGSPAIKSIRVDVY-YLDDPVVTVHQSIGEAKEQFY 150 Query: 144 KTCQVFLSCWAPNISEITYSWRRETTM-----DFGMEPHS-LFTDGQVLSI---SLGPGD 194 VFL C A + + YSWRR + D G+E + FT G+ + +L P D Sbjct: 151 YERTVFLRCVANSNPPVRYSWRRGQEVLLQGSDKGVEIYEPFFTQGETKILKLKNLRPQD 210 Query: 195 RDVAYSCIVS 204 YSCI S Sbjct: 211 Y-ANYSCIAS 219 >gi|157168355 CD22 molecule [Homo sapiens] Length = 847 Score = 33.9 bits (76), Expect = 0.17 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Query: 75 RFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFI 134 +FLG + N +L + P+ DSG + M +++ + W + + L V + P +Q+ Sbjct: 93 QFLG--DKNKNCTLSIHPVHLNDSGQLGLRM-ESKTEKWMERIHLNVSERPFPPHIQLPP 149 Query: 135 AVERDAQPSKTCQVFLSCW 153 ++ + + TC + SC+ Sbjct: 150 EIQESQEVTLTCLLNFSCY 168 >gi|13376852 CD276 antigen isoform b [Homo sapiens] Length = 316 Score = 33.5 bits (75), Expect = 0.22 Identities = 69/290 (23%), Positives = 109/290 (37%), Gaps = 43/290 (14%) Query: 11 LWEAL---LPITVTGAQVLSKVGGSVLLVAA--RPPGFQVREA--IWRSLWPSEELLATF 63 LW L L + V V++ VG L + PGF + + IW+ L +++L+ +F Sbjct: 21 LWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQ-LTDTKQLVHSF 79 Query: 64 FRGSLETLYHSRFLGRAQL------HSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTL 117 G + S + R L N SL L + D G+F+ + +L Sbjct: 80 AEGQDQG---SAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSL 136 Query: 118 QLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWR---------RET 168 Q+ A P + + +D +P T + S + E W+ T Sbjct: 137 QV----AAPYSKPSMTLEPNKDLRPGDTVTITCSSYR-GYPEAEVFWQDGQGVPLTGNVT 191 Query: 169 TMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPVSWDLATVTPWDSCHHEAAPGK 228 T E LF VL + LG YSC+V NPV A + + P + Sbjct: 192 TSQMANE-QGLFDVHSVLRVVLGANG---TYSCLVRNPVLQQDAHGSVTITGQPMTFPPE 247 Query: 229 ASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKKKKDVHADRVGPETEN 278 A + V L V ++LL+ L F W K K+ + G E ++ Sbjct: 248 ALWVTVGLSVCLIALLVALA--FVCWR------KIKQSCEEENAGAEDQD 289 >gi|68161541 carcinoembryonic antigen-related cell adhesion molecule 1 isoform 2 precursor [Homo sapiens] Length = 464 Score = 33.1 bits (74), Expect = 0.29 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 7/132 (5%) Query: 78 GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 GR ++ N SL + + D+G +++ ++ + T Q VY +P+P + Sbjct: 97 GRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----S 151 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 ++ P + P + TY W + P ++G L D Sbjct: 152 NNSNPVEDKDAVAFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDT 210 Query: 198 A-YSCIVSNPVS 208 Y C + NPVS Sbjct: 211 GPYECEIQNPVS 222 >gi|19923195 carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1 precursor [Homo sapiens] Length = 526 Score = 33.1 bits (74), Expect = 0.29 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 7/132 (5%) Query: 78 GRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVE 137 GR ++ N SL + + D+G +++ ++ + T Q VY +P+P + Sbjct: 97 GRETIYPNASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHVYPELPKPSIS-----S 151 Query: 138 RDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDV 197 ++ P + P + TY W + P ++G L D Sbjct: 152 NNSNPVEDKDAVAFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDT 210 Query: 198 A-YSCIVSNPVS 208 Y C + NPVS Sbjct: 211 GPYECEIQNPVS 222 >gi|98986445 carcinoembryonic antigen-related cell adhesion molecule 5 preproprotein [Homo sapiens] Length = 702 Score = 33.1 bits (74), Expect = 0.29 Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 7/134 (5%) Query: 76 FLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIA 135 + GR ++ N SL + + D+G +++ ++ + T Q +VY +P+P + Sbjct: 95 YSGREIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSIS---- 150 Query: 136 VERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDG-QVLSISLGPGD 194 +++P + P + TY W + P ++G + L++ + Sbjct: 151 -SNNSKPVEDKDAVAFTCEPETQDATYLW-WVNNQSLPVSPRLQLSNGNRTLTLFNVTRN 208 Query: 195 RDVAYSCIVSNPVS 208 +Y C NPVS Sbjct: 209 DTASYKCETQNPVS 222 >gi|118572606 hemicentin 1 [Homo sapiens] Length = 5635 Score = 33.1 bits (74), Expect = 0.29 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 8/132 (6%) Query: 79 RAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVER 138 R + +NLSLEL ++ D+G + MV + G ++ L V + P V V + + Sbjct: 567 RIRTLANLSLELKSVKFNDAGEYH-CMVSSEGGSSAASVFLTVQEP---PKVTV---MPK 619 Query: 139 DAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA 198 + + +V + C A + +W G + + +DG + + P D + Sbjct: 620 NQSFTGGSEVSIMCSATGYPKPKIAWTVNDMFIVGSHRYRMTSDGTLFIKNAAPKDAGI- 678 Query: 199 YSCIVSNPVSWD 210 Y C+ SN D Sbjct: 679 YGCLASNSAGTD 690 Score = 28.1 bits (61), Expect = 9.2 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 10/123 (8%) Query: 63 FFRGSLETLYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY 122 +F+G LE L S FL L L ++ + D+G+++ + ++ G+ T + L V Sbjct: 735 WFKGDLE-LRPSTFLIIDPLLGLLKIQ--ETQDLDAGDYTCVAINEAGRA-TGKITLDVG 790 Query: 123 DAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTD 182 VFI D V L C+ E T WRR M P S+ + Sbjct: 791 SP------PVFIQEPADVSMEIGSNVTLPCYVQGYPEPTIKWRRLDNMPIFSRPFSVSSI 844 Query: 183 GQV 185 Q+ Sbjct: 845 SQL 847 >gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapiens] Length = 428 Score = 32.7 bits (73), Expect = 0.37 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 25/149 (16%) Query: 71 LYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMV----DTRGQPWTQTLQLKVYDAVP 126 +Y + GR ++SN SL + + D+G++++ +V TRG+ T +Y P Sbjct: 90 IYGPAYSGRETVYSNASLLIQNVTREDAGSYTLHIVKRGDGTRGE--TGHFTFTLYLETP 147 Query: 127 RPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSL 179 +P + R+ + V L+C P + +Y W ++ +L Sbjct: 148 KPSISSSNLYPREDMEA----VSLTC-DPETPDASYLWWMNGQSLPMTHSLQLSKNKRTL 202 Query: 180 FTDGQVLSISLGPGDRDVAYSCIVSNPVS 208 F G V + GP Y C + NPVS Sbjct: 203 FLFG-VTKYTAGP------YECEIRNPVS 224 >gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] Length = 3874 Score = 32.0 bits (71), Expect = 0.64 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%) Query: 88 LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141 L+LG +S D+G ++ + G T +L VY A RP V +A + Sbjct: 367 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 421 Query: 142 PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200 P V L C A T SW E L TDG VL + PG+ YS Sbjct: 422 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 475 Query: 201 CIVSNP 206 C+ S+P Sbjct: 476 CVASSP 481 >gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] Length = 3783 Score = 32.0 bits (71), Expect = 0.64 Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 18/126 (14%) Query: 88 LELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVY------DAVPRPVVQVFIAVERDAQ 141 L+LG +S D+G ++ + G T +L VY A RP V +A + Sbjct: 276 LQLGRAQSSDAGVYTCKASNAVGAAEKAT-RLDVYVPPTIEGAGGRPYVVKAVA----GR 330 Query: 142 PSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDRDVA-YS 200 P V L C A T SW E L TDG VL + PG+ YS Sbjct: 331 P-----VALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLE-SPGEASSGLYS 384 Query: 201 CIVSNP 206 C+ S+P Sbjct: 385 CVASSP 390 >gi|67188443 CD276 antigen isoform a [Homo sapiens] Length = 534 Score = 31.6 bits (70), Expect = 0.83 Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 38/255 (14%) Query: 41 PGFQVREA--IWRSLWPSEELLATFFRGSLETLYHSRFLGRAQL------HSNLSLELGP 92 PGF + + IW+ L +++L+ +F G + S + R L N SL L Sbjct: 274 PGFSLAQLNLIWQ-LTDTKQLVHSFTEGRDQG---SAYANRTALFPDLLAQGNASLRLQR 329 Query: 93 LESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSC 152 + D G+F+ + +LQ+ A P + + +D +P T + S Sbjct: 330 VRVADEGSFTCFVSIRDFGSAAVSLQV----AAPYSKPSMTLEPNKDLRPGDTVTITCSS 385 Query: 153 WAPNISEITYSWR---------RETTMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIV 203 + E W+ TT E LF VL + LG YSC+V Sbjct: 386 YR-GYPEAEVFWQDGQGVPLTGNVTTSQMANE-QGLFDVHSVLRVVLGANG---TYSCLV 440 Query: 204 SNPVSWDLATVTPWDSCHHEAAPGKASYKDVLLVVVPVSLLLMLVTLFSAWHWCPCSGKK 263 NPV A + + P +A + V L V ++LL+ L F W K Sbjct: 441 RNPVLQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALA--FVCWR------KI 492 Query: 264 KKDVHADRVGPETEN 278 K+ + G E ++ Sbjct: 493 KQSCEEENAGAEDQD 507 Score = 31.2 bits (69), Expect = 1.1 Identities = 56/232 (24%), Positives = 88/232 (37%), Gaps = 39/232 (16%) Query: 11 LWEAL---LPITVTGAQVLSKVGGSVLLVAA--RPPGFQVREA--IWRSLWPSEELLATF 63 LW L L + V V++ VG L + PGF + + IW+ L +++L+ +F Sbjct: 21 LWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQ-LTDTKQLVHSF 79 Query: 64 FRGSLETLYHSRFLGRAQL------HSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTL 117 G + S + R L N SL L + D G+F+ + +L Sbjct: 80 AEGQDQG---SAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSL 136 Query: 118 QLKVYDAVPRPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSWR---------RET 168 Q+ A P + + +D +P T + S + E W+ T Sbjct: 137 QV----AAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ-GYPEAEVFWQDGQGVPLTGNVT 191 Query: 169 TMDFGMEPHSLFTDGQVLSISLGPGDRDVAYSCIVSNPV----SWDLATVTP 216 T E LF +L + LG YSC+V NPV + T+TP Sbjct: 192 TSQMANE-QGLFDVHSILRVVLGANG---TYSCLVRNPVLQQDAHSSVTITP 239 >gi|21314600 carcinoembryonic antigen-related cell adhesion molecule 8 [Homo sapiens] Length = 349 Score = 31.6 bits (70), Expect = 0.83 Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 21/162 (12%) Query: 76 FLGRAQLHSNLSLELGPLESGDSGNFSVLMVDTRGQPWTQTLQLKVYDAVPRPVVQVFIA 135 + R ++ N SL + + D+G++++ ++ T Q V+ P+P + Sbjct: 95 YSNRETIYPNASLLMRNVTRNDTGSYTLQVIKLNLMSEEVTGQFSVHPETPKPSIS---- 150 Query: 136 VERDAQPSKTCQVFLSCWAPNISEITYSWRRETTMDFGMEPHSLFTDGQVLSISLGPGDR 195 ++ P + P TY W + P ++G L Sbjct: 151 -SNNSNPVEDKDAVAFTCEPETQNTTYLW-WVNGQSLPVSPRLQLSNGNRTLTLLSVTRN 208 Query: 196 DVA-YSCIVSNPVSW--------------DLATVTPWDSCHH 222 DV Y C + NP S D T++P D+ +H Sbjct: 209 DVGPYECEIQNPASANFSDPVTLNVLYGPDAPTISPSDTYYH 250 >gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b [Homo sapiens] Length = 419 Score = 31.6 bits (70), Expect = 0.83 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 21/147 (14%) Query: 71 LYHSRFLGRAQLHSNLSLELGPLESGDSGNFS--VLMVDTRGQPWTQTLQLKVYDAVPRP 128 +Y + GR ++SN SL + + D+G+++ ++M + T +Y P+P Sbjct: 90 IYGPAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETPKP 149 Query: 129 VVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSLFT 181 + R+A + V L+C P + +Y W + +LF Sbjct: 150 SISSSKLNPREAMEA----VSLTC-DPETPDASYLWWMNGQSLPMSHRLQLSETNRTLFL 204 Query: 182 DGQVLSISLGPGDRDVAYSCIVSNPVS 208 G V + GP Y C + NPVS Sbjct: 205 LG-VTKYTAGP------YECEIRNPVS 224 >gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [Homo sapiens] Length = 426 Score = 31.6 bits (70), Expect = 0.83 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 21/147 (14%) Query: 71 LYHSRFLGRAQLHSNLSLELGPLESGDSGNFS--VLMVDTRGQPWTQTLQLKVYDAVPRP 128 +Y + GR ++SN SL + + D+G+++ ++M + T +Y P+P Sbjct: 90 IYGPAYSGRETIYSNASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLETPKP 149 Query: 129 VVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW-------RRETTMDFGMEPHSLFT 181 + R+A + V L+C P + +Y W + +LF Sbjct: 150 SISSSKLNPREAMEA----VSLTC-DPETPDASYLWWMNGQSLPMSHRLQLSETNRTLFL 204 Query: 182 DGQVLSISLGPGDRDVAYSCIVSNPVS 208 G V + GP Y C + NPVS Sbjct: 205 LG-VTKYTAGP------YECEIRNPVS 224 >gi|194097369 pregnancy specific beta-1-glycoprotein 5 [Homo sapiens] Length = 335 Score = 31.6 bits (70), Expect = 0.83 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 11/98 (11%) Query: 71 LYHSRFLGRAQLHSNLSLELGPLESGDSGNFSVLMVD----TRGQPWTQTLQLKVYDAVP 126 +Y + GR ++SN SL + + D+G++++ ++ TRG T +Y +P Sbjct: 90 IYGPAYTGRETVYSNASLLIQNVTREDAGSYTLHIIKRGDRTRGV--TGYFTFNLYLKLP 147 Query: 127 RPVVQVFIAVERDAQPSKTCQVFLSCWAPNISEITYSW 164 +P + + +++P + V P TY W Sbjct: 148 KPYITI-----NNSKPRENKDVLAFTCEPKSENYTYIW 180 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.321 0.135 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,801,666 Number of Sequences: 37866 Number of extensions: 514970 Number of successful extensions: 1070 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1021 Number of HSP's gapped (non-prelim): 81 length of query: 285 length of database: 18,247,518 effective HSP length: 101 effective length of query: 184 effective length of database: 14,423,052 effective search space: 2653841568 effective search space used: 2653841568 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.