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Search of human proteins with 98986464
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|98986464 transmembrane emp24 domain-containing protein 10
precursor [Homo sapiens]
(219 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|98986464 transmembrane emp24 domain-containing protein 10 pre... 437 e-123
gi|33457308 transmembrane emp24 protein transport domain contain... 112 3e-25
gi|39725636 transmembrane emp24 protein transport domain contain... 108 4e-24
gi|32996709 transmembrane emp24 protein transport domain contain... 73 2e-13
gi|5803149 coated vesicle membrane protein [Homo sapiens] 66 2e-11
gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens] 59 4e-09
gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo ... 45 5e-05
gi|109637791 transcription factor-like nuclear regulator [Homo s... 31 0.94
gi|110815815 centlein isoform 1 [Homo sapiens] 30 1.2
gi|167555106 centlein isoform 2 [Homo sapiens] 30 1.2
gi|54112107 ectodysplasin A isoform EDA-D [Homo sapiens] 30 2.1
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 30 2.1
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 30 2.1
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 30 2.1
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 30 2.1
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 30 2.1
gi|45439370 TAO kinase 1 [Homo sapiens] 30 2.1
gi|10092597 mucolipin 1 [Homo sapiens] 30 2.1
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 29 2.7
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 29 2.7
gi|21389613 tektin 4 [Homo sapiens] 29 2.7
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 28 4.7
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 28 6.1
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 28 6.1
gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2 ... 28 6.1
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 28 6.1
gi|206597541 solute carrier family 39 (metal ion transporter), m... 28 6.1
gi|206597539 solute carrier family 39 (metal ion transporter), m... 28 6.1
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 28 8.0
gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens] 28 8.0
>gi|98986464 transmembrane emp24 domain-containing protein 10
precursor [Homo sapiens]
Length = 219
Score = 437 bits (1123), Expect = e-123
Identities = 219/219 (100%), Positives = 219/219 (100%)
Query: 1 MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEI 60
MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEI
Sbjct: 1 MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEI 60
Query: 61 SDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQ 120
SDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQ
Sbjct: 61 SDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQ 120
Query: 121 LVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNE 180
LVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNE
Sbjct: 121 LVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNE 180
Query: 181 STNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLIE 219
STNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLIE
Sbjct: 181 STNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLIE 219
>gi|33457308 transmembrane emp24 protein transport domain containing
4 [Homo sapiens]
Length = 227
Score = 112 bits (279), Expect = 3e-25
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 21/233 (9%)
Query: 1 MSGLSGPPARR-GPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAY- 58
M+G+ P R G L LL L G + + FH+ ++C EEI + +V G Y
Sbjct: 1 MAGVGAGPLRAMGRQALLLLALCATGAQ---GLYFHIGETEKRCFIEEIPDETMVIGNYR 57
Query: 59 -EISDQSG-----GAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESK 112
++ D+ GL H+++ D G ++ S++ ++G+F FT+ ++C S
Sbjct: 58 TQMWDKQKEVFLPSTPGLGMHVEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSN 117
Query: 113 GT-------GRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDF 165
T G++ V LD++ G A NY EIA +KL L++ R+L D E I +
Sbjct: 118 STRMALFAGGKLR---VHLDIQVGEHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQ 174
Query: 166 AYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
Y + REE R T+ESTN RVL++SI LI WQ+ +L+ FF+AKKL+
Sbjct: 175 DYQRYREERFRLTSESTNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>gi|39725636 transmembrane emp24 protein transport domain containing
9 [Homo sapiens]
Length = 235
Score = 108 bits (270), Expect = 4e-24
Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 18/215 (8%)
Query: 18 LLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEIS-------DQSGGAGGL 70
LLL+ L R A+ FH+ +KC EEI + +V G Y + GL
Sbjct: 25 LLLVLWLATR-GSALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGL 83
Query: 71 RSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGT-------GRIPDQLVI 123
+++ D ++ +++ ++G+F FT+ ++C S T G + V
Sbjct: 84 GMFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLR---VH 140
Query: 124 LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTN 183
LD++ G A +Y EIA +KL L++ +R+L + E I + Y + REE R T+ESTN
Sbjct: 141 LDIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTN 200
Query: 184 TRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
RVL++SI L+ + WQ+ +L+ FF+AKKL+
Sbjct: 201 QRVLWWSILQTLILVAIGVWQMRHLKSFFEAKKLV 235
>gi|32996709 transmembrane emp24 protein transport domain containing
7 [Homo sapiens]
Length = 224
Score = 73.2 bits (178), Expect = 2e-13
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 5/201 (2%)
Query: 16 LALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLK 75
L LLL + GP I+F LP N+++C E+I + T +++ G +
Sbjct: 21 LLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVIT----GGHYDVDCR 76
Query: 76 ITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNY 135
+ D G +LY + F FT ++ CF ++ + + V D + G + +
Sbjct: 77 LEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFS-TFTHKTVYFDFQVGEDPPLF 135
Query: 136 EEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMF 195
+V L +E + + +S+++ + + RE + R E NTRV Y+S+
Sbjct: 136 PSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEAL 195
Query: 196 CLIGLATWQVFYLRRFFKAKK 216
L+ ++ QVF L+ FF K+
Sbjct: 196 ILLVVSIGQVFLLKSFFSDKR 216
>gi|5803149 coated vesicle membrane protein [Homo sapiens]
Length = 201
Score = 66.2 bits (160), Expect = 2e-11
Identities = 45/202 (22%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 20 LLFLLGPRLVLAISFHLPINSR--KCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKIT 77
LL LL L + + I++ +C E + + +E+++ G L ++IT
Sbjct: 7 LLVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMGLIFEVAE----GGFLDIDVEIT 62
Query: 78 DSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYE 136
+Y + + GK+ F ++ CF ++ + P ++ +D+ + ++ E
Sbjct: 63 GPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDME 122
Query: 137 EIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFC 196
A KL+ + + L ++ ++ YM+ RE R N++TN+RV+ +S F
Sbjct: 123 TEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALV 179
Query: 197 LIGLATWQVFYLRRFFKAKKLI 218
L+ + Q++YL+RFF+ ++++
Sbjct: 180 LVAMTLGQIYYLKRFFEVRRVV 201
>gi|6679189 transmembrane emp24 domain containing 3 [Homo sapiens]
Length = 217
Score = 58.5 bits (140), Expect = 4e-09
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 13 PFPLALLLLFLLGPRLV----LAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAG 68
P ++LLL LL R ++F LP N+++C EE+ + + + Y++ +GG
Sbjct: 6 PRSASVLLLLLLLRRAEQPCGAELTFELPDNAKQCFHEEVEQGVKFSLDYQVI--TGGHY 63
Query: 69 GLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKH 128
+ +++ D G+ +Y + F + E +++ CF ++ + + V D +
Sbjct: 64 DVDCYVE--DPQGNTIYRETKKQYDSFTYRAEVKGVYQFCFSNEFS-TFSHKTVYFDFQV 120
Query: 129 GVEAKNYEEIA-KVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVL 187
G E ++ +V L +E + + +++++ + + RE + R E N+RV
Sbjct: 121 GDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVS 180
Query: 188 YFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218
Y+S+ L ++ QV L+ FF K+ I
Sbjct: 181 YWSVGETIALFVVSFSQVLLLKSFFTEKRPI 211
>gi|5803040 interleukin 1 receptor-like 1 ligand precursor [Homo
sapiens]
Length = 227
Score = 45.1 bits (105), Expect = 5e-05
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 33 SFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATK 92
+F LP ++C + + + Y++ G GL + G +L S+
Sbjct: 35 TFLLPAGRKQCFYQSAPANASLETEYQVI----GGAGLDVDFTLESPQGVLLVSESRKAD 90
Query: 93 GKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELR 152
G + +++CF++ + I ++LV ++ + E E ++P E+
Sbjct: 91 GVHTVEPTEAGDYKLCFDNSFS-TISEKLVFFELIFDSLQDDEEVEGWAEAVEPEEMLDV 149
Query: 153 RLEDLSESIVNDFAYMKK--------REEEMRDTN--ESTNTRVLYFSIFSMFCLIGLAT 202
++ED+ ESI +++ R E RD N E RV ++S ++ L+ +A
Sbjct: 150 KMEDIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAV 209
Query: 203 WQVFYLRRFFKAKK 216
QV L+RFF+ K+
Sbjct: 210 LQVCTLKRFFQDKR 223
>gi|109637791 transcription factor-like nuclear regulator [Homo
sapiens]
Length = 2624
Score = 30.8 bits (68), Expect = 0.94
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 46 EEIHKDLLVTGAYEISDQSGG------AGGLRSHLKITDSAGHILYSKEDATKGKFAFTT 99
EEI KDL TG EIS + G + + LK T +E +++ K T
Sbjct: 1139 EEIDKDLEETGRREISPEENGPEEVKPVDEMETDLKTT--------GREGSSREK---TR 1187
Query: 100 EDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSE 159
E D EV I L + + + EE+ V K++ E+R E
Sbjct: 1188 EVIDAAEV---------IETDLEETEREISPQENGPEEVKPVGKMETDLKEIREEISQRE 1238
Query: 160 SIVNDFAYMKKREEEMRDTNE 180
++ +F+ ++++E ++++T +
Sbjct: 1239 KVLAEFSAIREKEIDLKETGK 1259
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 30.4 bits (67), Expect = 1.2
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 84 LYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEK 143
L ++ A + AF +++ E F+ K I D K V+ N EE ++
Sbjct: 190 LVKRKIAVDEENAFLRKEFSDLEKKFKDKSQE-------IKDTKECVQ--NKEEQNRLV- 239
Query: 144 LKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYF 189
+K LE E ++L ++ND ++K+E +R ST+ ++ F
Sbjct: 240 IKNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTF 285
>gi|167555106 centlein isoform 2 [Homo sapiens]
Length = 391
Score = 30.4 bits (67), Expect = 1.2
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 84 LYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEK 143
L ++ A + AF +++ E F+ K I D K V+ N EE ++
Sbjct: 190 LVKRKIAVDEENAFLRKEFSDLEKKFKDKSQE-------IKDTKECVQ--NKEEQNRLV- 239
Query: 144 LKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYF 189
+K LE E ++L ++ND ++K+E +R ST+ ++ F
Sbjct: 240 IKNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTF 285
>gi|54112107 ectodysplasin A isoform EDA-D [Homo sapiens]
Length = 142
Score = 29.6 bits (65), Expect = 2.1
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 3 GLSGPPARRGPFPLALLLLFLLGPRL---VLAISFHLPINSRKCLREEIHKDLLVTGAYE 59
G G PAR G LL L G L +L + +L + S L +G
Sbjct: 26 GCGGAPARAGEGNSCLLFLGFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPG 85
Query: 60 ISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCF 109
S GGL IT G ++ G+ A ++ D + CF
Sbjct: 86 TSGTLSSLGGLDPDSPITSHLGQPSPKQQPLEPGEAALHSDSQDGHQACF 135
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 29.6 bits (65), Expect = 2.1
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 119 DQLVILDMKHGVEAKNYEEIAKVEKLKPLEV-ELRRLEDLSESIVNDFAYMKKREEEMRD 177
DQL IL M+ ++ EE+ K+ K +E+ EL+++ E+++ + +K EE++
Sbjct: 403 DQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKG 462
Query: 178 TNE 180
T +
Sbjct: 463 TEQ 465
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 29.6 bits (65), Expect = 2.1
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 82 HILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAK- 140
H+ S EDA ++ D FE F+S T R D L LD + K+ + + K
Sbjct: 129 HVFCSIEDAY-------AQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 181
Query: 141 VEKLKPLEVELRR-LEDLSESIVNDF-----AYMKKREEEMRDTNESTNTRVLYFSIFSM 194
+K+K +L+ L+ I++DF A M+ + E+ N + + F+I
Sbjct: 182 SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEA 241
Query: 195 F 195
F
Sbjct: 242 F 242
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 29.6 bits (65), Expect = 2.1
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 82 HILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAK- 140
H+ S EDA ++ D FE F+S T R D L LD + K+ + + K
Sbjct: 126 HVFCSIEDAY-------AQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 178
Query: 141 VEKLKPLEVELRR-LEDLSESIVNDF-----AYMKKREEEMRDTNESTNTRVLYFSIFSM 194
+K+K +L+ L+ I++DF A M+ + E+ N + + F+I
Sbjct: 179 SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEA 238
Query: 195 F 195
F
Sbjct: 239 F 239
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 29.6 bits (65), Expect = 2.1
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 82 HILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAK- 140
H+ S EDA ++ D FE F+S T R D L LD + K+ + + K
Sbjct: 126 HVFCSIEDAY-------AQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 178
Query: 141 VEKLKPLEVELRR-LEDLSESIVNDF-----AYMKKREEEMRDTNESTNTRVLYFSIFSM 194
+K+K +L+ L+ I++DF A M+ + E+ N + + F+I
Sbjct: 179 SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEA 238
Query: 195 F 195
F
Sbjct: 239 F 239
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 29.6 bits (65), Expect = 2.1
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 82 HILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAK- 140
H+ S EDA ++ D FE F+S T R D L LD + K+ + + K
Sbjct: 126 HVFCSIEDAY-------AQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKD 178
Query: 141 VEKLKPLEVELRR-LEDLSESIVNDF-----AYMKKREEEMRDTNESTNTRVLYFSIFSM 194
+K+K +L+ L+ I++DF A M+ + E+ N + + F+I
Sbjct: 179 SDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEA 238
Query: 195 F 195
F
Sbjct: 239 F 239
>gi|45439370 TAO kinase 1 [Homo sapiens]
Length = 1001
Score = 29.6 bits (65), Expect = 2.1
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 125 DMKHGVEAKNYEEIAKVE-----KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMR 176
D++H + + +E + ++E ++ + EL RL+ +E + N Y K+RE E+R
Sbjct: 646 DLEHAMLLRQHESMQELEFRHLNTIQKMRCELIRLQHQTE-LTNQLEYNKRRERELR 701
>gi|10092597 mucolipin 1 [Homo sapiens]
Length = 580
Score = 29.6 bits (65), Expect = 2.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 53 LVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKF 95
L+TGAY+ GGAG S L+ +I ++ T GKF
Sbjct: 516 LITGAYDTIKHPGGAGAEESELQ-----AYIAQCQDSPTSGKF 553
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 29.3 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 125 DMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNE 180
+M +E +E+ + K L +E+ +L+DL +S+VN K EE NE
Sbjct: 673 EMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVN-----SKSEEMTLQINE 723
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 29.3 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 125 DMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNE 180
+M +E +E+ + K L +E+ +L+DL +S+VN K EE NE
Sbjct: 673 EMSQKIETMQFEKDNLITKQNQLILEISKLKDLQQSLVN-----SKSEEMTLQINE 723
>gi|21389613 tektin 4 [Homo sapiens]
Length = 435
Score = 29.3 bits (64), Expect = 2.7
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 23/130 (17%)
Query: 39 NSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFT 98
++R L +HK L EI+DQ L+ +K ++ H+ ++ +
Sbjct: 301 DARYKLHHHLHKTLR-----EITDQEHNVAALKQAIKDKEAPLHVAQTR--------LYL 347
Query: 99 TEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLS 158
E+C ++ + + VE N A EKL E LR LED+
Sbjct: 348 RSHRPNMELCRDAAQFRLLSE----------VEELNMSLTALREKLLEAEQSLRNLEDIH 397
Query: 159 ESIVNDFAYM 168
S+ D A M
Sbjct: 398 MSLEKDIAAM 407
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 28.5 bits (62), Expect = 4.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 99 TEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVE 150
TE+ +F K I D+ +I + N+EE++ +EKL+PL+ E
Sbjct: 148 TEEASLFRKPLVLKEEPTIEDETLINKSLSLKKCSNHEEVSLLEKLQPLQEE 199
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 28.1 bits (61), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMR 176
EA E+ +++ ++ EL RL+ +E + N Y K+RE+E+R
Sbjct: 685 EATRELELRQLQAVQRTRAELTRLQHQTE-LGNQLEYNKRREQELR 729
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 28.1 bits (61), Expect = 6.1
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMR 176
EA E+ +++ ++ EL RL+ +E + N Y K+RE+E+R
Sbjct: 685 EATRELELRQLQAVQRTRAELTRLQHQTE-LGNQLEYNKRREQELR 729
>gi|71565160 SMC1 structural maintenance of chromosomes 1-like 2
[Homo sapiens]
Length = 1235
Score = 28.1 bits (61), Expect = 6.1
Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 DQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDT 178
++L +HG N ++I E+++ + + +LE+ +++ ++ K++EE + D
Sbjct: 405 ERLAFEKRRHGEVQGNLKQIK--EQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDE 462
Query: 179 NESTNTRVLYFS 190
E T +R+ F+
Sbjct: 463 IEKTKSRMSEFN 474
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 28.1 bits (61), Expect = 6.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 126 MKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTR 185
M+ E + EE+ E K E++LR+ E+ ++ EE+MR E + +R
Sbjct: 540 MRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSR 599
Query: 186 VLY 188
+ Y
Sbjct: 600 MGY 602
>gi|206597541 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 13 PFPLALLLLFLLGPRLV 29
P PL+LLLL LLGPRL+
Sbjct: 226 PSPLSLLLLRLLGPRLL 242
>gi|206597539 solute carrier family 39 (metal ion transporter),
member 5 [Homo sapiens]
Length = 540
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 13 PFPLALLLLFLLGPRLV 29
P PL+LLLL LLGPRL+
Sbjct: 226 PSPLSLLLLRLLGPRLL 242
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 27.7 bits (60), Expect = 8.0
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 117 IPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMR 176
+PD + LD+ ++ K V++L +E E ++L + E +FA +K +E ++
Sbjct: 88 VPDPVPALDLGQQLQLK-------VQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIK 140
Query: 177 DTNE 180
E
Sbjct: 141 ALKE 144
>gi|31652238 cut-like homeobox 1 isoform c [Homo sapiens]
Length = 676
Score = 27.7 bits (60), Expect = 8.0
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 117 IPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMR 176
+PD + LD+ ++ K V++L +E E ++L + E +FA +K +E ++
Sbjct: 99 VPDPVPALDLGQQLQLK-------VQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIK 151
Query: 177 DTNE 180
E
Sbjct: 152 ALKE 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,240,003
Number of Sequences: 37866
Number of extensions: 355522
Number of successful extensions: 1263
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1232
Number of HSP's gapped (non-prelim): 37
length of query: 219
length of database: 18,247,518
effective HSP length: 98
effective length of query: 121
effective length of database: 14,536,650
effective search space: 1758934650
effective search space used: 1758934650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.